Gene
|
Chr
|
SNP
|
Primer
|
Sequence (5'-3')
|
Extension primer sequence (5'-3')
|
PIK3CD
|
1
|
rs7518602
|
1st-primer
|
ACGTTGGATGATATTTTGGGGTGGCACACG
|
gcatGACACACACCCAAAATGTGACT
|
|
|
|
2nd-primer
|
ACGTTGGATGTTGCGAGGTGACCAGTGTTG
|
|
MKNK1
|
1
|
rs3753359
|
1st-primer
|
ACGTTGGATGCAGAGGCTGCAGTGTTTATG
|
GATGCCGCATCACCCT
|
|
|
|
2nd-primer
|
ACGTTGGATGCAGAGCATCCACCTATTGAG
|
|
PPP1CB
|
2
|
rs7598876
|
1st-primer
|
ACGTTGGATGCTCTCTCCACGTCCACGGC
|
ggggaGGCGCCTGCGCCACCG
|
|
|
|
2nd-primer
|
ACGTTGGATGTCTGCGTAACCGGGACTTC
|
|
PRKCI
|
3
|
rs481781
|
1st-primer
|
ACGTTGGATGGCTGATCATGGCATCAAAC
|
ctcgCGCGTGAAAGCACCCCTC
|
|
|
|
2nd-primer
|
ACGTTGGATGCTAGAGCTGGTCATTGTCTC
|
|
MAPK9
|
5
|
rs1363513
|
1st-primer
|
ACGTTGGATGATGGGGAAAACCGTGGAGAG
|
CCACTCTTCTAGTCCCCAA
|
|
|
|
2nd-primer
|
ACGTTGGATGGTCAACCATTGTTCCCACTC
|
|
PRKAA1
|
5
|
rs461404
|
1st-primer
|
ACGTTGGATGGTAACATGCATTAGGCACTG
|
tttgGCTTCTCCTGCAATATCTTCCT
|
|
|
|
2nd-primer
|
ACGTTGGATGCTAAGCTCAAAGGCAGAAAC
|
|
PRKAG2
|
7
|
rs4078431
|
1st-primer
|
ACGTTGGATGACACCATAGGGCCTTTACTC
|
agggGTCCTGCGAAAGCAC
|
|
|
|
2nd-primer
|
ACGTTGGATGAGAGATGATCCTTTGGGTGG
|
|
PRKAR1B
|
7
|
rs4724904
|
1st-primer
|
ACGTTGGATGTGGTTTCCAGGTATCTGGAC
|
tccaaCCCACCCGGGCCCACGAGC
|
|
|
|
2nd-primer
|
ACGTTGGATGCACCCTCCTCCCTGCCTGA
|
|
GCK
|
7
|
rs12702070
|
1st-primer
|
ACGTTGGATGATCTGAACAGGTGGCAAAGG
|
CACTACAGTGACCGC
|
|
|
|
2nd-primer
|
ACGTTGGATGACCATGGTGACCACTCAATC
|
|
PRKACG
|
9
|
rs4745515
|
1st-primer
|
ACGTTGGATGTTCTAAGCTCCCTTTTCATC
|
ATCCCCAAGTATTTGGAAA
|
|
|
|
2nd-primer
|
ACGTTGGATGCTTGAAAAATCCCCAAGTAT
|
|
FBP1
|
9
|
rs7031924
|
1st-primer
|
ACGTTGGATGTTTTGAAGGTAGAGCTGATG
|
TCTCACATATCTCATCTGTCAA
|
|
|
|
2nd-primer
|
ACGTTGGATGAGTTTCTCAGGCCTCAAACC
|
|
HRAS
|
11
|
rs7939028
|
1st-primer
|
ACGTTGGATGAGCCGAGCTCTGACTGCGA
|
ggGGTCGCTGCTGACCCG
|
|
|
|
2nd-primer
|
ACGTTGGATGTCCTGCGCCGGTCGCTGCT
|
|
PRKAB1
|
12
|
rs6490265
|
1st-primer
|
ACGTTGGATGTTCCGGCGACTCCGTAAGT
|
AGCCTCGCGCGTTTAGC
|
|
|
|
2nd-primer
|
ACGTTGGATGTGGAATCGAGATAGCCTCGC
|
|
PRKAG1
|
12
|
rs2293446
|
1st-primer
|
ACGTTGGATGCATGACCCTCGCCGTCAGC
|
tcAACCGCCCTCCCCCGGGTCCTC
|
|
|
|
2nd-primer
|
ACGTTGGATGAGGCAAGGAACCCACCCTTC
|
|
KRAS
|
12
|
rs7311692
|
1st-primer
|
ACGTTGGATGATAGTAAATGGATGCGCGCC
|
cctccGACCGGTCTCCACAGAGAAG
|
|
|
|
2nd-primer
|
ACGTTGGATGCCGCTGACCGGTCTCCACA
|
|
PCK2
|
14
|
rs4982856
|
1st-primer
|
ACGTTGGATGCAGCCGCACATGATGTAACT
|
AGCTTGTTTGCCACC
|
|
|
|
2nd-primer
|
ACGTTGGATGCCCTCGTTCCTAGCTTGTTT
|
|
SOS2
|
14
|
rs1955926
|
1st-primer
|
ACGTTGGATGCCCAGACTCCAGCTATAAAC
|
tgCATGGTCTAGTAGTTTGACA
|
|
|
|
2nd-primer
|
ACGTTGGATGCTCCTATGAGTAAAGAGAAC
|
|
SHC4
|
15
|
rs12900666
|
1st-primer
|
ACGTTGGATGACTACAGATCATTAGCCGGG
|
cccaTTCTGCTCTGCCCTCCC
|
|
|
|
2nd-primer
|
ACGTTGGATGTTTTAGCTCTTCTGCTCTGC
|
|
PDPK1
|
16
|
rs76318740
|
1st-primer
|
ACGTTGGATGCCAAGGGTCAAGGGTCACAA
|
CTGCCCCTCTCTCCC
|
|
|
|
2nd-primer
|
ACGTTGGATGTTTGACCTTCAGCTGCCCCT
|
|
FASN
|
17
|
rs7222326
|
1st-primer
|
ACGTTGGATGCCTCCCTTTTCTGACCGCT
|
GTGCCTGGCCCCGCA
|
|
|
|
2nd-primer
|
ACGTTGGATGAGACACCTGTGGCCTCACAA
|
|
ACACA
|
17
|
rs11868124
|
1st-primer
|
ACGTTGGATGAGAACGCGCTGTTGCACTC
|
tGGAGTTTCACACTTGTTGCT
|
|
|
|
2nd-primer
|
ACGTTGGATGTGTGCATCCTTTACTGGACG
|
|
FLOT2
|
17
|
rs4795473
|
1st-primer
|
ACGTTGGATGGTAAATACACACCACTGTGC
|
CAGGAAGAAAGAAAGGAGT
|
|
|
|
2nd-primer
|
ACGTTGGATGAGGAACAGCTCCGAGTTCAC
|
|
INSR
|
19
|
rs1864009
|
1st-primer
|
ACGTTGGATGCAGCGACACTCGTCCCAGA
|
CTGGGCCGGGGCGCAC
|
|
|
|
2nd-primer
|
ACGTTGGATGTGGCTTGGGTCTCGCCCCT
|
|
PIK3R2
|
19
|
rs3736328
|
1st-primer
|
ACGTTGGATGTATTTCCAGAAACGCTCCGC
|
GGCCGAACACTCTCTAC
|
|
|
|
2nd-primer
|
ACGTTGGATGTTTCGGAAATGGCCGAACAC
|
|
CBLC
|
19
|
rs2965143
|
1st-primer
|
ACGTTGGATGTGTAGTCCTAGTTACTAGGG
|
ttccTTGCAGCCTTGACCTC
|
|
|
|
2nd-primer
|
ACGTTGGATGTGGTTGTTGGATCACCACTC
|
|
MKNK2
|
19
|
rs3810412
|
1st-primer
|
ACGTTGGATGGAAGAAGAAAGTAGGTGGCG
|
GCACGCTTGGAGTCCCA
|
|
|
|
2nd-primer
|
ACGTTGGATGTGCACCACCAGCACGCTTG
|
|
SHC2
|
19
|
rs73916989
|
1st-primer
|
ACGTTGGATGTGAGGAGAGAGCAGCCCCA
|
aaGCAGGGCGCAGAGAG
|
|
|
|
2nd-primer
|
ACGTTGGATGTTGGGAGGGTGCGACACTG
|
|
TRIP10
|
19
|
rs340141
|
1st-primer
|
ACGTTGGATGCAAGAAGTCCTTCCTCAACC
|
ttgcCCTAGACGCCTGGAGC
|
|
|
|
2nd-primer
|
ACGTTGGATGTTAGTGGGACGAACCTAGAC
|
|
PRKX
|
chrX
|
rs1003351
|
1st-primer
|
ACGTTGGATGTGCACCCAAGCCCGGAAGAT
|
ccctACTTCTGCTGAGCTAC
|
|
|
|
2nd-primer
|
ACGTTGGATGGTTTTGAACTTCACTTCTGC
|
|