Study site and Data collection
This study is a part of the Bangladesh Environmental Enteric Dysfunction (BEED) study (ClinicalTrials.gov ID: NCT02812615; Link: https://clinicaltrials.gov/ct2/results?cond=NCT02812615&term=&cntry=&state=&city=&dist=; Date of first registration: 24/06/2016), which is a community-based nutrition intervention study conducted in Dhaka, Bangladesh. The objective of the BEED study was to validate non-invasive biomarkers of environmental enteric dysfunction (EED) with small intestinal biopsy in order to have a better understanding of the disease pathogenesis. In the adult cohort of the study, malnourished adults aged 18–45 years (BMI <18.5 kg/m2) were enrolled. The participants received on-site nutritional intervention for 60 days consisting of one egg, 150 ml of whole milk and micronutrient sprinkles, as well as, nutritional counseling daily, for six days a week. The details and overall design of the BEED study have already been published elsewhere15. Participants failing to respond to nutritional therapy and also negative for secondary malnutrition, i.e. tuberculosis, parasitic infection were considered as probable cases of EED and upper-gastrointestinal (UGI) endoscopy was performed. Well-nourished adults (BMI >18.5 kg/m2) suffering from functional dyspepsia according to the Rome III criteria who had no evidence of any organic diseases on endoscopy and were otherwise healthy, were enrolled from the Gastroenterology Outpatient Department of Dhaka Medical College and Hospital (DMCH) as controls. For this particular study, a total of 64 adults (37 malnourished, 27 controls) were enrolled from July 2016 to May 2018. The study conforms to the principles outlined in the Declaration of Helsinki. Ethical approval was obtained from the Institutional review committee of icddr,b and all activities were performed in accordance with the relevant guidelines. The protocol number is PR-16007. A written informed consent for the intervention as well as UGI endoscopy and biopsy was obtained from the participants after a detailed explanation of the aims and procedures of the study.
Duodenal biopsy
UGI endoscopy procedures of malnourished and control groups were performed by endoscopists (RNM and MMR) at icddr,b Dhaka Hospital and Dhaka Medical College Hospital respectively using Olympus CV-170 scopes under sedation. Biopsy specimens were taken from the distal part of the duodenum (distal to the ampulla of Vater) using EndoJaw™ FB-230K 2.8 mm disposable biopsy forceps (Olympus Medical Systems Corporation, Tokyo, Japan). For fixation, biopsy samples were immediately placed in vials containing 10% buffered formalin solution and paraffin sections were prepared and stained by hematoxylin and eosin (H&E) stain. All the biopsies were reviewed by expert pathologists (KNB and MP), blinded to the case histories and endoscopic findings. The villous height, crypt depth, presence and intensity of inflammatory infiltrates in lamina propria and intraepithelial lymphocytes (IELs) were determined from the biopsied specimens16.
Duodenitis and intestinal histological characteristics
An operational classification was developed based on pathogenesis and cellular activity (Fig. 1). Non-specific duodenitis was defined as inflammation and morphological alteration of the duodenal mucosa not associated with any other pathological process17. Whereas, specific or secondary duodenitis referred to presence of a disease process such as Crohn’s disease, sarcoidosis, etc18. Whether the duodenitis was active (chronic active duodenitis) or not (chronic duodenitis) was based on the presence of neutrophilic infiltration or polymorphonuclear invasion, characterized by epithelial degeneration and regeneration with intercellular edema19.
As reported in several studies2,6,9,20,21, morphometric parameters of intestinal histology included measures of villous and crypt remodeling and infiltration of inflammatory infiltrates in the lamina propria. Villous changes included villous blunting or atrophy, which was defined as flattening of the mucosal surface secondary to the shortening and blunting of the intestinal villi and changes in crypt referred to elongation or hyperplasia of the crypts and was defined as an increase in the length of crypts and a reduction in the normal crypt to villous (C:V) ratio22. Total villous atrophy was defined as complete atrophy or flattening of the villi with a V:C ratio varying from 0:1 to 1:1, whereas subtotal and mild villous atrophy referred to partial blunting or shortening of the villi and mild reduction of villous height than normal respectively22. An increased IEL count in an otherwise normal duodenal biopsy specimen may be associated with certain immunological disorders, use of NSAIDs, lymphocytic/ collagenous colitis, bacterial overgrowth and gluten sensitive enteropathy22.
Even in the absence of active inflammation, the lamina propria might consist of plasma cells and lymphocytes22, and slides containing the presence of an excess of these infiltrates than normal based on eye estimation were only taken into consideration. As judged by the eye, presence of inflammatory infiltrates was further categorized into marked, moderate and mild forms. A marked infiltration denoted an intense and diffuse inflammatory infiltration clearly distinguishable on naked eye, a moderate infiltration denoted the presence of a lymphoid aggregation or follicle and a mild infiltration denoted a higher number of infiltrates than normal. More than 30 IELs/100 enterocytes was diagnosed as intraepithelial lymphocytosis22. IEL count was done by counting the number of lymphocytes per 20 enterocytes present on a random villous tip, and then summing up the numbers of these lymphocytes from such 5 random villi22. That is, 20 enterocytes multiplied by 5 villi resulting in the number of lymphocytes per 100 enterocytes. Subjective morphologic analysis of the mucosal surface architecture was carried out in LEICA DM 1000 LED microscope. Fig. 2 shows the schemes used to assess the morphological alterations of intestinal mucosa.
Statistical analyses
Statistical analyses were performed using SPSS version 20.0 (IBM). Mean values, standard deviation (SD) and 95% confidence intervals (CI) of means were used to describe the distribution and prevalence. Bivariate analysis was performed to quantify the relation between malnutrition and histological features.