Table 2
Clinical data from 12 control subjects
No.
|
Gender
|
Age (y)
|
|
Cause of death
|
Etiology diagnosis
|
Resection tissue
|
Histological
examination
|
Seizure
|
Application
|
1
|
M
|
15
|
|
Car accident
|
N/A
|
LH
|
n
|
None
|
GXP, WB, IHC, MSP
|
2
|
F
|
26
|
|
Car accident
|
N/A
|
LH
|
n
|
None
|
GXP, WB, IHC, MSP
|
3
|
M
|
18
|
|
Drowning
|
N/A
|
LH
|
n
|
None
|
GXP, WB, IHC, MSP
|
4
|
M
|
24
|
|
Car accident
|
N/A
|
LH
|
n
|
None
|
WB, IHC, MSP
|
5
|
M
|
37
|
|
N/A
|
Severe TBI
|
RH
|
n
|
None
|
WB, IHC, MSP
|
6
|
F
|
46
|
|
N/A
|
Severe TBI
|
RH
|
n
|
None
|
WB, IHC, MSP
|
7
|
M
|
35
|
|
N/A
|
Severe TBI
|
LH
|
n
|
None
|
IHC
|
8
|
M
|
45
|
|
N/A
|
RTG
|
RH
|
n
|
None
|
IHC
|
9
|
M
|
53
|
|
N/A
|
LTG
|
LH
|
n
|
None
|
IHC
|
10
|
F
|
44
|
|
N/A
|
LTG
|
LH
|
n
|
None
|
IHC
|
11
|
F
|
38
|
|
N/A
|
RTG
|
RH
|
n
|
None
|
IHC
|
12
|
F
|
49
|
|
N/A
|
LTG
|
LH
|
n
|
None
|
IHC
|
LTG, left temporal glioma; RTG, right temporal glioma; LH, left hippocampus; RH, right hippocampus; TBI, traumatic brain injury; GXP, gene expression profiling; IHC, immunohistochemistry; MSP, methylation specific PCR; WB, western blotting; l, left; r, right; F, female; M, male; n, normal.
|
Animals and Treatments
Adult male SD rats (200–240 g body weight) were obtained from the Experimental Animal Center of the Fourth Military Medical University. Preparation of the lithium–pilocarpine model of temporal lobe epilepsy and how animals were grouped were described in detail in our previously published articles17, 18.
Human mRNA profiling
Blocks of hippocampus chosen randomly from the epileptic (n=8) and control (n=3) tissue groups were cut into small pieces and homogenized in 1.5ml Trizol (Sigma). All samples underwent the same tissue dissection and RNA extraction sample preparation protocol performed by the same individuals. Spectrophotometric evaluation of RNA quality and quantity using a microvolumetric Nanodrop ND-2000 spectrophotometer (Thermo Fisher Scientific, USA). RNA integrity was verified by gel electrophoresis. The TruSeq® RNA LT Sample Prep Kit v2 (Illumina Inc., USA) was used for high-throughput strand-specific mRNA library preparation, and the qualified libraries were sequenced by Genergy Biotechnology Co. Ltd. (Shanghai, China) using Illumina HiSeq 2500 following the manufacturer’s instructions (Illumina)20. All sequencing and data analysis were conducted by Genergy Inc (Shanghai, China). A detailed description of the sequencing process is provided in the supplemental material.
Surgery and intracranial EEG recording
For EEG surgery, adult male SD rats were anaesthetized with sodium pentobarbital (50 mg/kg, i.p.). Stainless steel screws were used as electrodes, placed on top of the dura through small holes drilled through the skull and then fixed to the skull using dental cement. The locations of the electrodes were F3/4 (+2.0 mm from bregma, 2.25 mm lateral from midline), C3/4 (-3.0 mm from bregma, 2.75 mm lateral from midline), P3/4 (-7.0 mm from bregma, 2.75 mm lateral from midline) (Fig. 4B). The ground electrode was placed in the midline approximately 1.5 mm posterior of Lambda. EEG electrodes were wired to a head mount that was also fixed to the skull using dental cement (Fig. 4C). After 5–7 days of recovery from the surgery, EEG signals and synchronized video were recorded using the EEG-9200K (Nihon Kohden, Tokyo, Japan). The voltage differential between the pair of electrodes from each brain hemisphere were amplified with a high pass filter (1Hz) and recorded. EEG signals were sampled at 400 Hz and videos were recorded at 30 frames/sec. The detailed process is described in our previously published articles 21, 22.
Li-Pilo-induced SE and Behavioral grading of seizures
After 5 min of EEG and video recording of baseline activity, rats were first administered a single dose of methylscopolamine (1 mg/kg, i.p.) to allay the peripheral effects of pilocarpine. A single dose of pilocarpine (280 mg/kg, i.p.) was administered approximately 25 min after methylscopolamine to induce acute seizures. After 15 min, rats in the treatment group were injected with Fasudil (25 mg/kg, i.p., APExBIo Technology, USA) and returned to their home cages to observe the behavioral grade of seizures. The scoring was based on the Racine scale, as described previously (Racine, 1972) with the following stages: 0, no abnormality; 1, Mouth and facial movements; (2) Head nodding; (3) Forelimb clonus; (4) Rearing; (5) Rearing and falling. A full motor seizure, with temporary loss of postural control, is referred to as a Stage 5 motor seizure.
Cortical Primary Astrocyte Cultures from adult SD Rats
Adult male SD rats from the Experimental Animal Center of the Fourth Military Medical University were sacrificed in a CO2 chamber according to current Fourth Military Medical University (Animal Use for Research and Education Committee) guidelines. Cerebral cortex was dissected aseptically and the meninges removed. Cortices were dissociated into a cell suspension using mechanical digestion. Cells were plated in 6 well plates pre-coated with poly-L-lysine at a concentration of 5x105 cells/cm2 in modified DMEM/F12 medium [10% FBS, 15 mM HEPES, 14.3 mM NaHCO3, 1% fungizone and 0.04% gentamicin]. The first change ofmedium was performed after 24 h of culture. During the first week, the medium change occurred once every 2 days and, from the second week, once every 4 days. From the third week onwards, the cells received medium supplemented with 20% FBS23, 24. Around the third to fourth weeks, cells reached confluence and were used for the experiments. The purity of the primary astrocyte cultures was assessed by immunocytochemistry for GFAP.
Plasmid, shRNA and virus
The ROCK2 shRNA sequence used to increase ROCK2 expression was 5’- ACATGCCAGGTGGAGACCTTGTTAATTGCTCTTTTTG-3’ (Shanghai GenePharma). Scramble was used as negative control. ROCK2-overexpressing lentivirus were packaged in Hanbio Biotechnology (China).
Double immunofluorescence
Immunofluorescence was performed as described in our previously published articles25, 26. The brain sections were incubated in a primary antibody solution containing rabbit anti-ROCK2 antibody (1:700; #PA5-78290, Invitrogen) and mouse anti- NeuN antibody (1:1000; #ab104224, Abcam) or mouse anti-GFAP antibody (1:1000; #ab10062, Abcam) that was dissolved in the rinse buffer for 12 h at 4 °C. Before secondary antibody incubation, the sections were washed 3 times for 30 min in PBS. The sections were then incubated in a secondary antibody solution containing FITC-conjugated goat anti-rabbit IgG (1:2000; #ab6717, Abcam) and Texas Red-conjugated goat anti-mouse IgG (1:2000; #ab6787, Abcam) in the rinse buffer for 4 h at 4 °C. After washing 3 times for 30 min in PBS, the sections were coverslipped with anti-fading medium. Images of double immunofluorescence staining were obtained using a confocal laser-scanning microscope system (Nikon C2+, Tokyo, Japan). Images were analyzed with ImageJ software (ver. 1.46; NIH, USA).The ratios of cell number of single-positive cells and double-positive cells (%) was evaluated as described in the article27.
Western Blot Analysis
Total proteins from tissues or cell extracts (50 μg/gel lane) were separated by SDS-PAGE, blotted, and probed with anti-ROCK2 (1:800; #PA5-78290, Invitrogen), anti-Stat3 (1:3000; #ab68153, Abcam), anti-p-Stat3 (1:2000; #ab76315, Abcam), anti-β-actin (1:5000; #ab8227, Abcam), and anti-Tubulin (1:5000; #ab6160, Abcam) alone or in combination. Secondary antibodies conjugated with HRP (1:3000, Abcam, UK) were detected using the ChemiDoc XRS+ system (Bio-Rad, Hercules, USA). Bands were quantified by densitometry using ImageJ software (ver. 1.46; NIH, USA).
qPCR
Extract the RNA and generate complementary DNA through GoScript Reverse Transcription System (Promega). The qPCR assay was performed as described previously28. Primers used for qPCR analysis of ROCK2, c-Myc, Cyclin D1, GFAP, P21, P15, and β-actin are listed on Table 3.
Table 3
Oligonucleotide primers for real-time RT-PCR
mRNA target
|
Sense/anti-sense
|
ROCK2
|
TGCCCGATCATCCCCTAGAA
AGGCAGTTAGCTTGGTTTGT
|
c-Myc
|
GAGGTGGAAAACCCGACAGT
GAAATAGGGCTGCACCGAGT
|
Cyclin D1
|
TAGGGCTGGTAGCATGAGGT
AGATCCCGGTGGTACGAGAA
|
GFAP
|
TTGACCTGCGACCTTGAGTC
GAGTGCCTCCTGGTAACTCG
|
P21
|
TGTGATATGTACCAGCCACAGG
CGAACAGACGACGGCATACT
|
P15
|
GACTCACTCGCGGCTCC
GGCTCCCGTTAGACACTCTC
|
β-actin
|
CTCTGTGTGGATTGGTGGCT
CGCAGCTCAGTAACAGTCCG
|
Flow Cytometric Analysis of the Cell Cycle
Cell cycle assay was performed as described previously29.
ChIP
The ChIP analysis was performed using the ChIP Assay kit (Upstate Biotechnology, Charlottesville, VA). 107 cells were crosslinked with 1% formaldehyde for 10 min at 37 ℃ and then washed, lysed, and sonicated to generate 200–500 bp chromatin fragments. The samples were precleared with 60 μl of salmon sperm DNA–protein A-agarose and subsequently incubated at 4 ℃ overnight with 2 μg Stat3 antibody and rabbit IgG as control. Immunocomplexes were recovered, washed thoroughly, and eluted with the ChIP elution buffer. Following the reversal of crosslinks at 65 °C for 4 hours, samples were extracted with phenol/chloroform, precipitated with ethanol, and then used as templates for PCR amplification. The sequences of PCR primers detecting c-Myc and Cyclin D1 promoter are available on request.
Methylation Assay
The methylation assay were performed as previously described29. Primers for the methylated promoter region were 5’-GATATACGATAGGAATTACGGGG-3’ (sense) and 5’-TCTCTCTACCTTATCTAACCCG-3′ (antisense), and for the unmethylated region 5’-GATATATGATAGGAATTATGGGG-3’ (sense) and 5’-CTCTACCTTATCTAACCCATTCCC-3’ (antisense). The intensity of the methylated and the loading control products were analyzed by ImageJ software (NIH, Bethesda, MD) and compared with the base pairs of the amplicons and the cycles of individual PCR reactions. When the relative ratio of the methylated to the total DNA was more than 50 %, methylation was considered high, whereas it was considered low when the ratio was less than 50 %. Samples with no obvious methylation bands were considered as having no methylation.
IHC
Epileptic and control hippocampus tissues were collected at the tangdu Hospital of Fourth Military Medical University. The immunohistochemistry staining assay was performed and scored as previously described17. The primary antibodies for anti-ROCK2 (1:200, #PA5-78290, Invitrogen) and anti-p-Stat3 (1:150; #ab76315, Abcam) were applied. The protein levels were statistically analyzed by Student’s t-test. Linear regression and Pearson’s correlation significance were used to analyze ROCK2 and p-Stat3 correlation.
Statistical analysis
The data are expressed as the mean ±SEM. Statistical analyses were performed in GraphPad Prism 8.0 (GraphPad Software Inc, San Diego, CA). One-way ANOVA analysis followed by Dunnett’s multiple comparison test was used to determine the differences among multiple groups. Correlations between the protein levels of ROCK2 and p-Stat3 were assessed using Pearson’s rank correlation test. Statistical significance was based on a value of P < 0.05.