Animals
Rats used in this study were heterozygous Tsc2+/- (Eker) males, RRID:RGD_625624 (homozygous mutants are not viable) and their wild-type Long-Evans littermates, bred at the National Institute of Mental Health (NIMH) in Klecany, Czech Republic. Breeding Tsc2+/- males originated from the breeding colony at Technische Universität Dresden, Germany, or from subsequent generations born at NIMH. Long-Evans dams, RRID:RGD_2308852, were purchased from a supplier (Charles River, Germany). We took care to use wild-type females only, as dam genotype was demonstrated to influence maternal care and pup behavior in Tsc2+/- mice [41]. Breeding was performed in individually ventilated cages (Tecniplast, 40×35×21 cm) and after weaning at postnatal day (P)28, the offspring was transferred to standard Plexiglas boxes (44×28×23 cm) in an air-conditioned room with a 12 h/12 h light-dark cycle and food and water ad libitum.
On P3-P4, pups were sexed and genotyped by PCR using tissue samples from tail tips [42]. The offspring showed the expected Mendelian ratio 1:1 for Tsc2+/- and wild-type genotypes.
For behavioral experiments, we used males (n = 36) from five different litters (littermates evenly distributed among experimental groups for counterbalanced design). Additional adult males from different litters, which underwent the same treatment as the main group, were used for the EEG testing (n = 18) and everolimus quantification (n = 16). Individual animals were arbitrarily distributed to experimental groups. Each rat had a unique identification code independent on group membership, permitting experimental blinding. Obviously ill or suffering animals would have been excluded from the study, however no animal had to be excluded or died during the study.
All testing took place during the light phase of the daily cycle. Animals included in behavioral experiments were housed in groups of two or three. All experiments were approved by the Institutional Animal Care and Use Committee (Project of Experiments No. 66/2016) and complied with the Animal Protection Act of the Czech Republic, EU Directive (2010/63/EU). The study was not pre-registered.
Group design and timing of procedures
Sizes of experimental groups were calculated based on our data and experience from previous studies with the model [37–40,43]. Group sizes were also influenced by the limited number of litters available from the mutant breeding line. Ultrasonic vocalizations as a measure of mother-seeking behavior were recorded at P7 in a proportion of animals (for detailed description, see Supplementary Methods). At P12, DSE or control treatment was administered. All animals were attributed to four experimental groups depending on genotype and DSE status: wild-type naïve, Tsc2+/- naïve, wild-type DSE and Tsc2+/- DSE. At P19, a proportion of juvenile rats were behaviorally assessed as described below. At the age of three months, the main experimental setup was initiated, focusing on the response to treatment with everolimus. It comprised assessment of behavior, epileptiform activity and everolimus concentration in the brain. The experimental schedule consisted of three time points. First, rats underwent experiments under baseline (non-medicated) condition (T1), followed by two weeks of treatment with everolimus and a second round of experiments under medicated condition (T2). After 8 weeks of washing-out, a third round of experiments was conducted (T3). A graphical summary of the order of procedures and investigations can be found in Fig. 2a and Table 1.
Pilocarpine-induced developmental status epilepticus in pups
To simulate early developmental epilepsy, we used pharmacologically-induced DSE. We decided to use lithium-pilocarpine-induced DSE at P12 instead of the previous paradigm of repeated kainic acid-induced DSE at P7 and P14 [39,40]. The models are epileptologically very similar, but in a pilot experiment lithium-pilocarpine exhibited stronger phenotype without mortality previously reported for kainic acid [39] (Fig. 1, Suppl. Fig. S1). The lithium-pilocarpine seizure model is well characterized and has been successfully used as a model of early epilepsy [44,45].
Pilocarpine induction of DSE was performed following the protocol described by [46]. LiCl (127 mg/kg, i.p., dissolved in distilled water, purchased from Sigma Aldrich, Czech Republic, cat. no. L4408-100G) was applied to all pups at P11, to sensitize them to pilocarpine and to facilitate seizures [47]. After 24 hours (P12), half of the pups received a single i.p. injection of pilocarpine (35 mg/kg, injection volume 10 ml/kg, purchased from Sigma Aldrich, Czech Republic, cat. no. P6503-5G) and the others received 0.9% saline vehicle solution (naïve control). The state of the pups was checked by visual observation, heating pad was used to prevent hypothermia, and additional saline was applied after the DSE procedure to prevent dehydration. With regard to brain development, the time span between P7 to P14 in rats is comparable with the first year of life in humans [48]. DSE in this period leads to life-long impairments of cognition and synaptic plasticity [49,50]. Infantile spasms are a key component of early developmental epilepsy in TSC, associated with intellectual disability and ASD [15]. Chronic infantile spasms have been studied in rodents as genetic and as acquired models [51,52]. There is however no single optimal model of infantile spasms, most have limitations and many of the existing ones would not have been applicable for our study. We used DSE as an animal model of early epilepsy in TSC, although it is not a specific model of infantile spasms, in order to study differential effects of Tsc2 haploinsufficiency and experience of status epilepticus restricted to early life [39,40]. The DSE animal model resembles some aspects of early life epilepsy in TSC, in particular the severe seizure activity and the long-term effects on behavior.
Behavioral testing of juveniles
At P19, juvenile rats (n = 34) from the main experimental group were tested for spontaneous exploration of unknown environment and social behavior. In the open field test (OF), the juvenile was placed into the middle of a dimly illuminated (18 lux) Plexiglas box (40×35×21 cm) with fresh bedding and recorded for 3 min. Social interaction test was performed in the same box. After 5-min social isolation, two juveniles of the same genotype were put into the box simultaneously and recorded for 3 min. Social play, other social contact, self-grooming and digging were noted. Social play was the most distinctive behavioral category at this age, so we focused on it in the analysis. As it is a behavior in which both pups participate, every pair was taken as a single measurement. Again, USV were recorded during SI sessions. The experimenter who handled the animal was always unaware of the experimental group assignment.
Behavioral testing battery in adults
For the testing battery, we used 36 rats: wild-type naïve (n = 10), Tsc2+/- naïve (n = 7), wild-type DSE (n = 11) and Tsc2+/- DSE (n = 8). The order of animals was always randomized with respect to group membership. Due to limited throughput of the behavioral tests, the animals were divided into two cohorts shifted by 1 week. The behavioral testing battery was preceded by habituation sessions for open field and elevated plus maze apparatuses at P74-P78, to eliminate novelty effect from the subsequent testing. The behavioral testing battery conducted at T1, T2 and T3 covered several behavioral domains affected in TSC and ASD patients: social behavior and communication (social interaction, SI), anxiety (elevated plus maze test, EPM; light-dark test, LD), spontaneous locomotor activity (open field test, OF), learning and memory (Y-maze test; novel object recognition test, NORT). The design and temporal order of the tests is represented by Tab. 1 and 2. The experimenter who handled the animal was always unaware of the experimental group assignment.
Table 1: Design of the experiment in adults.
Time points
|
Habituation
|
T1
|
Everolimus administration
|
Washing out period
|
T3
|
|
T2
|
Procedure
|
OF, EPM
|
Behavioral testing battery
|
|
Behavioral testing battery
|
|
Behavioral testing battery
|
Age
|
P74-P78
|
P81-P92
|
|
P95-P106
|
|
P158-P169
|
Duration
|
2 days
|
4 days
|
|
4 days
|
8 weeks
|
4 days
|
12 days, 6 injections (every other day)
|
EPM = elevated plus maze test; OF = open field test; P = postnatal day
Table 2: Order of tests used in the behavioral testing battery.
Phase
|
Habituation
|
Behavioral testing battery (T1, T2, T3)
|
Day
|
|
day1
|
day2
|
day3
|
day4
|
Test
|
OF
EPM
|
EPM
LD
|
OF
|
NORT
|
SI
Y-maze
|
EPM = elevated plus maze test; LD = light-dark test; NORT = novel object recognition test; OF = open field test; SI = social interaction test.
Social interaction test (SI) In this test, two unfamiliar rats (non-cage mates) of the same age from the same group were interacting in the neutral, familiar environment of the open field arena, dimly illuminated (18 lux). Social isolation (10 min) preceded the interaction test, which itself took 10 min, but only the first 5 minutes were analyzed. The following parameters were evaluated: a) social behavior: anogenital exploration, non-anogenital exploration, climbing on or pinning the social partner, following or approaching the social partner, play/fight, evade; b) non-social behavior: self-grooming, freezing.
Elevated plus maze test (EPM) The apparatus, made from light grey plastic, consisted of four arms (each 10 cm wide, 50 cm long), elevated 70 cm above the floor. Two arms opposite to each other were open, the other two were surrounded by 30 cm high walls. The apparatus was illuminated by fluorescent tubes on the ceiling (480 lux in open arms, 85 lux in closed arms). Each animal was placed into the middle part facing into an open arm and recorded for 5 min. The animals were habituated to the apparatus by a 5-min session one week before T1, to avoid the effect of novelty. Time spent in the open arms was evaluated as a classical measure of anxiety [53]. Looking down from the maze (a form of risk assessment behavior also termed head dipping or scanning in the literature) was counted whenever the head of the rat protruded over the edge of an open arm. This behavior has been shown to provide a measure of anxiety, perhaps linked to decision-making [54,55] . The total number of arm visits was used as a measure of locomotor activity.
Light-dark test (LD) The apparatus consisted of a dark compartment with black walls (25×25 cm) and a light compartment with white floor and transparent walls (50×25 cm; illumination 1000 lux), both divided by a grey wall disrupted by a 10×15 cm opening. It was manufactured to match the one used by Waltereit et al. (2011). The animal was placed into the dark compartment and recorded for 10 min. Time spent in the light compartment was recorded as a measure of anxiety.
Open field test (OF) For the open field test, a square white chipboard arena (70×70 cm; illumination 1000 lux), was used. The animal was placed into the middle of the arena, and left to freely explore for 10 min. Habituation to the arena was done one week before T1. Locomotor activity (total distance walked) was measured.
Novel object recognition test (NORT) Novel object recognition test was done in the same apparatus as OF, but with a dim, indirect illumination (18 lux). It was done 24 hours after the open field test, to ensure familiarity of the animals with the environment. Two different pairs of identical objects of comparable size (glass jars full of pebbles and glass cuboid containers) were used. The objects were fastened by two-sided tape to the floor in the opposite corners (20 cm from the walls) and cleaned with water after each session. The animal was put into the central part facing an empty corner. In the initial sampling session, the rat was left free in the arena to explore two identical objects for 5 min. After 15 min retention interval, one object was replaced by a novel one and the animal was allowed to explore them for another 5 min (discrimination session). The use of objects as familiar/novel was counterbalanced to minimize the effect of any eventual preference of object or place, unrelated to the experimental stimulus. Discrimination index, as a measure of ability to differentiate between familiar and unfamiliar objects, was calculated as (n-f)/(n+f); where ‘n’ is time spent by exploration of the novel object, while ‘f’ is the time spent exploring the familiar object.
Y-maze test Y-maze was used to study spontaneous alternation as a measure of working memory. The apparatus consisted of three identical arms (10 cm wide, 50 cm long, 30 cm high walls; labeled A, B and C) made from white plastic. The rat was placed into the central part facing the arm A and was left free to explore the maze for 8 min. Spontaneous alternation (in %) was calculated as number of correct triads of arm entries (ABC, BCA, CAB, ACB, CBA, BAC) divided by the number of all triads. A same arm entrance (AA, BB, CC) was counted when the rat came out of an arm to the center and returned back again to the same arm. Total arm visits were analyzed as an activity measure.
Everolimus administration
Everolimus suspension was provided by Novartis (Basel, Switzerland) in a proprietary vehicle at 20 mg/ml. For application, it was diluted in 0.9% saline and injected i.p. at a dose of 1 mg/kg (injection volume 1 ml/kg), as described previously [40]. The drug was administered every other day for 12 days (6 injections in total), and the testing battery under medication (T2) was initiated during the second week of administration. All animals were injected by the active substance, and within-subject design was used to assess the effects on behavior. The drug was always applied in the afternoon, after behavioral testing. Body weight of rats was measured every day before the injection. Everolimus levels in the brain were not affected by rat genotype or history of DSE, and remained stable in the period corresponding to the behavioral testing, as shown in Suppl. Fig. S3.
Everolimus levels in the brain tissue
To address the question of everolimus levels in the brain during the behavioral tests, we harvested the brains from the main experimental group immediately after the T3 behavioral testing (8-weeks after the end of everolimus therapy). The rats were decapitated under isoflurane anaesthesia. Additional rats of the same origin, age and treatment (n = 16), were sacrificed at the end of the 14-day everolimus medication, corresponding to the end of T2.
To verify if everolimus concentrations during the T2 testing period were stable, we used a group of intact Wistar rats (RRID:RGD_13508588, Velaz Ltd., Czech Republic, n = 16). The rats undergoing the same everolimus treatment as the main experimental group were sacrificed either before the medication (baseline), or 24 h after the third or the sixth (final) everolimus injection, which corresponds to the beginning and the end of the T2 behavioral testing battery.
The rats were anaesthetized by isoflurane and sacrificed by decapitation, their brains quickly removed, cooled by dry ice and stored at -80 °C until analysis. Approximately 100 mg of rat brain tissue was transferred to Eppendorf tube; 100 mg of bullets for homogenization and 1 ml of acetonitrile were added to each sample. The samples were thoroughly vortexed and homogenized using the Bullet Blender Gold (Next Advance, USA) at 4 °C (15 minutes, speed 8). Then the samples were centrifuged (10 min, 11.2 RPM) and the resulting supernatants were carefully pipetted to HPLC vials.
For HPLC-MS/MS analysis, UltiMate 3000 LC system (Thermo, USA) coupled with QTrap 6500 mass spectrometer (AB Sciex, Canada) were used. Chromatographic separation was performed on Kinetex F5 column, 2.1 x 150 mm, 1.7 µm (Phenomenex, USA). The mobile phases for gradient elution were 0.1 % formic acid + 5 mM ammonium formate in water (A) and methanol with 0.1 % formic acid (B). The flow rate of the mobile phase was 200 μL/min and column temperature was set at 30 °C. The MS/MS apparatus was operating in positive mode. A multiple reaction monitoring (MRM) method was developed with three transitions of m/z used for the detection of everolimus (975.6→908.5, 980.6→948.5, 980.6→775.5) and three transitions for the deuterated standard of the analyte (979.6→912.5, 984.6→952.5, 984.6→779.5). For data acquisition and management, Analyst software (RRID:SCR_015785) version 1.63 and MultiQuant 3.0.3 were utilized (AB Sciex).
Stereotactic surgery
For EEG recordings, we used additional 18 male rats divided into the same groups: wild-type naïve (n = 5), Tsc2+/- naïve (n = 3), wild-type DSE (n = 4) and Tsc2+/- DSE (n = 6). The animals were stereotactically implanted at P80 with 14 gold-plated epidural electrodes (Mill-Max Mfg. Corp., product number 310-93-132-41-001, purchased from Farnell Czech Republic), under general isoflurane anesthesia (2.5 %). Electrodes were implanted epidurally in homologous areas of the frontal, parietal and temporal regions of the right and left hemispheres. Coordinates were taken from Paxinos rat brain atlas, RRID:SCR_006369 [56]: A +5 mm and L ±2 mm for the frontal association cortex (electrodes F3/F4), A +2.2 mm and L ±3.2 mm for the primary motor cortex (electrodes C3/C4), A −3.8 mm and L ±2.5 mm (electrodes P3/P4) and A -4.5 mm and L ±4.5 mm (electrodes P5/P6) for the lateral parietal association cortex, A -3.6 mm and L ±7.2 mm for the temporal association cortex (electrodes T3/T4) and A -8.3 mm and L ±5.8 mm for the secondary auditory cortex (electrodes T5/T6). Reference electrode was implanted above the olfactory bulb and ground electrode subcutaneously in the occipital region. Electrode positions are indicated in Fig. 4. Electrodes and the connector were fixed to the skull with dental cement Dentalon (containing 1 g of active gentamicin per 100 g of Dentalon powder). After the surgery, rats were single-housed to prevent damage of the implant, and left for one week to recover.
EEG recordings
Four recordings were acquired from each animal. The first one was done one week after implantation (Session 1 at P95 – age corresponding to T1 behavioral experiments). Then, everolimus was administered for two weeks prior to the second recording (Session 2 at P111, corresponding to T2 behavioral testing). Two more recordings were made during the washing-out period (Session 3 at P124 and Session 4 at P138), the latter corresponding to T3 behavioral testing.
Recording sessions were 42-55 minutes long (40 minutes of signal from each animal were analyzed), and were conducted in a box with bedding. The rats were able to move freely in the cage during EEG recording while connected to a data acquisition system.
Raw EEG signal was recorded using the BrainScope (M&I, Prague) BioSDA09 amplifier having a frequency band of 0.15–70 Hz. The system acquired data with a 16-bit depth, 7.63 nV/bit resolution (i.e. ∼130 bit/μV) and a dynamic range of ±500 μV. The data were recorded using a sampling rate of 1000 Hz.
Data evaluation and statistical analysis
Sample sizes were adopted from previous behavioral experiments in the Tsc2+/- (Eker) rat [39,40]. In some substantially laborious experiments (EEG recordings), sample size was determined by the framework of experimental possibilities. With respect to our previous studies [39,40], anogenital exploration was the primary outcome. No animal was excluded from the study.
During all behavioral tests, the animals were recorded by an overhead video camera located above the apparatus. BORIS software [57] was used for offline manual scoring of rat behavior; EthoVision software (RRID:SCR_000441, Noldus Information Technology, Wageningen, Netherlands) for automatic analysis of trajectory in OF. Ultrasonic calls were marked manually in the Audacity software (RRID:SCR_007198). EEG recordings were analyzed manually in BrainVision Analyzer 2.1 (RRID:SCR_002356), all findings were video confirmed with behavior. All offline analyses were blinded.
Data were statistically evaluated using the IBM SPSS Statistics 25 (RRID:SCR_019096). Three-way analysis of variance (ANOVA) with repeated measures was used for the main behavioral testing battery. MANOVA, t-test and one-way ANOVA were used when applicable. The factors included in the analysis were genotype (Tsc2+/-) and DSE as between-subject measures and time as within-subject measure. The factor of time covered the course of everolimus medication (T1 – baseline before treatment; T2 – under everolimus medication; T3 – after washing out). In case there was a significant genotype-time or DSE-time interaction, we used simple effects to specify the nature of the interaction, and to identify the testing condition where the groups differed. The data was log transformed to meet parametric assumption in case of non-normal distribution (indicated by Shapiro-Wilk test of normality). When transformation did not lead to normalization of the data (number of open arm visits in the elevated plus maze), the negative binomial model with log link function was used. Significance was accepted at p ≤ 0.05. When the assumption of sphericity was not met in ANOVA with repeated measures, we used Greenhouse-Geisser correction of df and p-values.
Statistical analysis of the data was independently verified using GraphPad PRISM 5, RRID:SCR_002798 (two-way ANOVA and Bonferroni post-hoc tests), also used to indicate significance in the figures. Data are shown as bar graphs with mean and SEM. With regard to the quantity of data combined in the figures, additional showing of individual data points resulted in overloaded presentations. Instead, full output tables of statistical results obtained from both types of statistical software can be found in Suppl. Tab. S1.