A dual screening approach with XRE-reporter and Heterologous AhR reporter genes identifies CGS-15943 as a novel AhR activator.
Our study began with an attempt to identify novel ligands of the AhR and study their functional effects in cells, with the goal of isolating molecules with anti-cancer potential. XRE reporter genes are based on the canonical XRE binding sequence such as those found in the promoter of CYP1A1, and are efficiently activated by AhR ligands [26]. However, because it is these same ligands that are often associated with dioxin-like toxicity, we considered that it would be advantageous to employ a second screening approach that would allow us to identify ligands capable of bringing the AhR into a transcriptionally activate state without the strict requirement of canonical XRE binding per se. Thus, we employed a heterologous yeast GAL4/AhR fusion reporter in which the AhR DNA-binding domain (DBD) was replaced with the GAL4 yeast DBD coupled with a GAL-activating domain fused with ARNT. Together, these constructs were capable of activating a luciferase reporter gene driven by a GAL4-response element. A schematic of the screening constructs used in this study are shown in Fig. 1A. We used two independent screenings in parallel, Hepa1 cells expressing the pGudLuc1.1 reporter gene for the XRE-based screen, and heterologous GAL4-reporter based AhR activation screen. Using these two systems, we screened the library of pharmacologically active compounds (LOPAC1280) and 50,000 Chembridge pharmacophore library. The screening results with LOPAC library are shown in Fig. 1B. There were unique hits in each reporter system, but among the top 10 hits for each screen, only 4 compounds were shared in common (Fig. 1D). We focused on those compounds highly active in the non-canonical XRE system but minimal activity in the XRE screen.
Confirmatory screening of CGS-15943 showed that it activated the GAL4/AhR reporter system in 239T cells in a dose-dependent manner, and was also capable of activating the reporter system to a much greater extent than the relative maximal concentration of TCDD (1 nM) (Fig. 1D). To our surprise, confirmatory screening in the XRE-system performed at a shorter timepoint (4 hrs vs ~ 24 for the screen) showed that CGS-15943 was also capable of dose-dependently activating the XRE-reporter system (Fig. 1E). We did note a high degree of cell death in the Hepa1 cells treated with CGS-15943 for prolonged treatment times. Thus, CGS-15943 does activate AhR transcription, but on our initial screen was falsely negative in the XRE-based screen due to a high proportion of cell death.
CGS-15943 is a ligand of the AhR
Having identified CGS-15943 as an AhR activator, we next performed in vitro ligand-displacement assays to confirm specific AhR binding. CGS-15943 exhibited an EC50 for binding of 96 nM, while TCDD had an EC50 of 3.2 nM (Fig. 1G), consistent with previous observations for TCDD [15]. To provide a separate line of evidence for direct binding of CGS-15943 to the AhR, we next showed that CGS-15943 alters the proteolysis of AhR in limited proteolysis experiments, which has been demonstrated for TCDD [27] (Fig. 1H). We also confirmed that CGS-15943 induces nuclear translocation of the AhR using immunohistochemical studies (Fig. 1I). Because we observed XRE-activation in a shorter-term reporter assay, we next tested whether CGS-15943 could activate several known classic AhR-target genes. Consistent with this possibility, CGS-15943 activated the AhR target genes CYP1A1 and NADPH: quinone oxidoreductase (NQO1) in mouse Hep1c1c7 cells (Fig. 1K), and CYP1A1 in the HepG2 human hepatoma cell line (Fig. 1J), in both cases to a similar degree as 1 nM TCDD. Taken together, these results showed that our screening strategy was effective in identifying novel AhR ligands, including CGS-15943.
CGS-15943 induces apoptosis
In confirmatory screening, we observed that CGS-15943 potently induces cell death in cultures of Hepa1 cells. Given its ability to active the AhR, we were intrigued by the possibility the apoptotic effects of CGS-15943’s may be mediated by the AhR. To address this possibility, we evaluated the effects of CGS-15943 on Hepa1 cells with time lapse video microscope (Video S1). We noted significant rounding of cells and membrane blebbing in cells treated with CGS-15943 (Fig. 2A), consistent with apoptosis. We quantitatively evaluated the effect of CGS-15943 on Hepa1 cells using an xCelligence assay, which we have used previously to study the phenotypic effects of AhR-ligands [23]. Addition of CGS-15943 to proliferating Hepa1 cells decreased the normalized cell index. Concentrations of CGS-15943 from 20 µM to 2 µM led to a dramatic decline in cell abundance, approaching that of the initial cell index at plating by 48 hours (Fig. 2B). Quantitative analysis of the normalized cell index values at 24 hours showed a statistically significant decrease in normalized cell index at concentrations of CGS-15943 down to 500 nM, and by 48 hours a significant effect of 100 nM CGS-15943 was also observed (Fig. 2B). Using DNA staining and microscopy, we visually confirmed that CGS-15943 induces nuclear fragmentation in Hepa1 cells, consistent with apoptosis (Fig. 2C). We also confirmed that CGS-15943 induces apoptosis using Annexin V binding (Fig. 2D), and activation of Caspases 3/7 (Fig. 2E). In all of our studies, equivalent AhR-activating concentrations of TCDD (1 nM) had no effect on Hepa1 cell with respect to induction of apoptosis.
AhR-dependent induction of apoptosis by CGS-15943
Given that the induction of apoptosis by CGS-15943 occurred at concentrations similar to those required to activate the AhR, we next asked if the effects were AhR-dependent. To address this possibility we first utilized transient knockdown of the AhR using morpholino oligonucleotides targeting the AhR and conjugated with a cell-penetrating peptide [28]. We confirmed successful knockdown of AhR using a morpholino targeting the AhR AUG start codon (Fig. 3A). Using these knockdown and control cells, we quantitatively assessed apoptosis by counting the number of cells with nuclear fragmentation. We found that AhR knockdown significantly decreased the percentage of cells with nuclear fragmentation in response to treatment with CGS-15943 compared to control cells (Fig. 3B). Visually, we also saw a noticeable difference in morphology between AhR knockdown cells treated with CGS-15943 compared to treated control cells, with decreased rounding of cells (Fig. 3C). These results indicated that the induction of apoptosis by CGS-15943 are mediated through AhR activation.
We have previously used Hepa1 cell culture models of high and low expression of AhR to investigate the AhR-dependent phenotypic effects of various ligands [28]. In the present study, we first turned to C12 and C12 + AhR cells, which are derivative cell lines of the Hepa1 cell line that have low and stably-restored expression of AhR, respectively (Fig. 3D). Using these cells, we found that CGS-15943 increased Annexin V staining only in the presence of AhR (Fig. 3E). Consistent with the results of the transient knockdown experiments, there was a significant decrease in the degree of nuclear fragmentation in the absence of AhR compared to AhR-expressing cells (Fig. 3F). Absence of AhR (C12 cells) was associated with a significant increase in the number of viable cells compared to C12 + AhR cells (Fig. 3G).
To provide a third independent line of evidence for the requirement for AhR in mediating the apoptotic effects of CGS-15943, we utilized Hepa1 and TAO cells, which we and others have also used to characterize the effects of AhR ligands [28], as TAO cells express very low levels of AhR (Fig. 3H). Using these cells, we first performed real-time analysis of cellular proliferation as described above. TAO cells were significantly resistant to apoptosis induced by CGS-15943 compared to WT Hepa1 cells, but did exhibit some changes presumably due to low-baseline AhR levels (Fig. 3I). We also performed time-lapse microscopy in Hepa1 and TAO cells cultured side-by-side but physically separated in a small culture flask to observe the effects of the compound on the two cell types simultaneously. Consistent with the results of the xCelligence assay (Fig. 3I), TAO cells remained viable in the presence of CGS-15943 while Hepa1 cells underwent rapid and efficient apoptosis (Figure S2 and Video S2). We confirmed these results with cellular viability assays, in which there was a clear demarcation in the number of viable cells according to AhR expression (Fig. 3J). Interestingly, while CGS-15943 influenced TAO cell proliferation, there was absolutely no activation of caspase 3/7 in these cells at concentrations of CGS-15943 up to 20 µM (Fig. 3K). In contrast, Hepa1 cells exhibited an approximately 20-fold increase in caspase 3/7 activity that appeared to saturate at a concentration of 5 µM. In colony forming assays, pulsing Hepa1 or TAO cells with CGS-15943 for 24 hours with CGS-15943 at 10 µM or 5 µM (Fig. 3L) led to a complete loss of Hepa1 cell colonies, whereas TAO cells were virtually unaffected. Further, to provide additional evidence for a lack of activation of apoptosis in TAO cells, we performed Western blot analysis for PARP and caspase 3. As shown in Fig. 3M, TAO cells were completely resistant to the formation of cleaved PARP and caspase 3 in response to treatment with CGS-15943. In addition, we found that CGS-15943 decreased levels of AhR in treated Hepa1 cells, consistent with its ability to bind the AhR and induce the phenomenon of receptor recycling [28].
ARNT is required for CGS-15943 mediated apoptosis
ARNT is the obligate heterodimer of the AhR, and is required for the transcriptional activity of the AhR [28]. Thus, it was logical to ask whether ARNT is also required for CGS-15943 mediated induction of apoptosis. As we have done previously to study the ARNT-dependent effects of SU5416, Leflunomide, and Raloxifene [28], we used a cell culture model consisting of C4 cells, which express a mutant and transcriptionally inactive ARNT, and vT{2} cells, which stably re-express a WT ARNT protein. We first confirmed that ARNT is required for transcriptional activation of the AhR gene target CYP1A1 by CGS-15943 using semi-quantitative PCR (Fig. 4A). Next, we performed real-time growth profiling of C4 and vT{2} cells using the xCelligence assay. C4 cells were completely resistant to the effects of CGS-15943, appearing no different than cells treated with vehicle or 1 nM TCDD (Fig. 4B). Conversely, the normalized cell index values of vT{2} cells treated with CGS-15943 declined precipitously. Time lapse video microscopy using C4 and vT{2} cells in the parallel culture assay confirmed these findings (Figure S3 and Video S3). C4 cells were largely resistant to the effects of CGS-15943 in colony forming assays during continuous exposure to CGS-15943 (Fig. 4C). Nuclear fragmentation was also almost completely abrogated in C4 cells treated with CGS-15943 compared to vT{2} cells (data not shown). Likewise, only vT{2} cells treated with CGS-15943 exhibited increased staining with Annexin V (Fig. 4D) or activation of caspase 3/7 (Fig. 4E). Together, these results clearly showed that ARNT is required for the induction of apoptosis by CGS15943. Furthermore, the absence of any significant effect of CGS-15943 on C4 cells argue for an AhR-dependent growth-inhibitory pathway activated by CGS-15943.
Identification of Fas ligand as a putative target of CGS-15943 mediated AhR activation
Upregulation of the pro-apoptotic molecule Bax has been described in literature as an AhR-target gene responsible for oocyte destruction mediated by the PAH 7,12-dimethylbenz[a]anthracene (DMBA) [29].
Thus, we asked if the potent induction of apoptosis by CGS-15943 led us to investigate the potential involvement of BAX. CGS-15943 did not increase the expression of BAX at the transcriptional level (Figure S4) or at the level of protein (data not shown). However, stable knockdown of BAX in Hepa1 cells partially blocked the induction of apoptosis by CGS-15943 (Figure S4). Based on these data, we hypothesized that the CGS-15943 mediated apoptosis may involve the intrinsic cell death pathway.
We next used a focused RT-qPCR-gene array to identify mediators of CGS-15943 induced apoptosis downstream of AhR activation in Hepa1 cells. To narrow the potential list of gene targets, we performed the screen in parallel with cells treated with 1 nM TCDD, reasoning that any genes also upregulated by TCDD would be unlikely candidates for mediators of CGS-15943 induced apoptosis (Fig. 5A). Several putative gene targets were potently upregulated by CGS-15943 but not TCDD, the most notable of which was Fas ligand (FasL, CD95L). FasL is involved in immune cell regulation, inducing death of target cells expressing the Fas receptor (CD95). To ensure that induction of FasL could be a regulator of apoptosis in Hepa1 cells, presumably in an autocrine fashion, we confirmed that Hepa1 cells express Fas receptor (Fig. 5B). We next determined if induction of FasL by CGS-15943 correlated with AhR expression. FasL was significantly upregulated by CGS15943 in Hepa1 cells and vT{2} cells, but not the reciprocal AhR and ARNT null cell lines, respectively (Figs. 5C-D). Similarly, surface expression of FasL as determined by flow cytometry was increased to a greater extent in Hepa1 cells than Tao cells in response to CGS-15943 (Fig. 5E). To investigate whether FasL is a direct or indirect target of the AhR, we performed experiments in which Hepa1 cells were co-treated with CGS-15943 and the protein synthesis inhibitor cycloheximide (CHX). Addition of cycloheximide to Hepa1 cells treated with TCDD results in a super-induction of CYP1A1 [28], while blockade of protein synthesis would be expected to inhibit the transcription of any secondary gene targets. We found that CHX co-treatment with CGS-15943 led to a superinduction of CYP1A1, but blocked the increase in FasL mRNA as determined by qPCR (Figure S5).
FasL is required for CGS-15943 induced apoptosis
Having shown that CGS-15943 induces apoptosis in Hepa1 cells in a strongly AhR and ARNT dependent manner, and identified FasL and BAX as putative downstream regulators, we next asked if FasL is required for CGS-15943 mediated apoptosis in Hepa1 cells. To address this possibility, we generated stable Hepa1 cells lines expressing shRNAs directed against FasL. We confirmed basal knockdown of FasL in these cells by qPCR, and also showed that the knockdown blocked induction of FasL in response to treatment with CGS-15943 (Fig. 5F). Knockdown of FasL significantly decreased caspase 3/7 activation compared with WT Hepa1 cells, indicating that FasL is required for CGS-15943 mediated cell death (Fig. 5H).
FasL-mediated apoptosis can occur through type I signaling, involving only the extrinsic cell death pathway, or type II signaling, which involves cross-talk with the intrinsic mitochondrial-dependent cell death pathway [30, 31]. Our results with Bax knockdown (Figure S4) suggested mitochondrial involvement. Thus, to determine if CGS-15943 induces cell death occurs through the intrinsic cell death pathway, or involves the mitochondria, we asked if CGS-15943 could increase the activity of caspases 8 and 9. Specifically, activation of both caspases would suggest a mechanism by which FasL signaling activates caspase 8 to cleave the pro-apoptotic protein BID to induce mitochondrial-mediated apoptosis and subsequent activation of caspase 9 [30, 31]. We observed increased activity of both caspases 8 and 9 in an AhR-dependent manner (Fig. 5H), suggesting that apoptosis induced by CGS-15943 involves both the intrinsic and extrinsic cell death pathways through a Type II signaling mechanism.
MRS1220 is a CGS-15943 derivative with unique properties
Given the unique ability of CGS-15943 to induce AhR-dependent apoptosis in such a selective manner, we were next interested in identifying similar related molecules. We investigated a series of derivatives of CGS-15493, including those with additions of various moieties at the free amine group, for their ability to induce apoptosis in Hepa1 cells. From this effort, we identified one compound, MRS1220, henceforth named CGSB, with properties similar to CGS-15943 (Fig. 6A). Interestingly, CGSB was largely inactive in short-duration XRE-reporter assays (Fig. 6B), and did not appear to significantly increase expression of CYPA1A in semi-quantitative RT-PCR experiments (Fig. 6C). On the other hand, while not as potent as the parent molecule, CGSB retained the ability to induce apoptosis in Hepa1 cells according to xCelligence (Fig. 6D) and caspase 3/7 activation (Fig. 6E). Thus, while MRS1220 does not appear to exhibit increased potency with respect to the induction of apoptosis compared with CGS-15943, it may selectively regulate AhR transcription and is thus an attractive target for future studies.
CGS-15943 induces AhR-dependent apoptosis in human liver and breast cancer cells
Having characterized the effects of CGS-15943 in a mouse liver cancer cell line, we were next interested in expanding the repertoire of cell types in which CGS-15943 may have efficacy as an anti-cancer agent. We first investigated whether CGS-15943 has activity against human HepG2 liver cancer cells. We found that CGS-15943 decreased HepG2 cell viability, and that transient knockdown of AhR with an siRNA rescued HepG2 cells from CGS-15943 induced cell death (Figs. 7A; Figure S6 and Video 4). CGS-15943 increased caspase 3/7 activation in HepG2 cells (Fig. 7B), and increased the expression of FasL mRNA (Fig. 7C). Thus, CGS-15943 induces apoptosis in a human liver cancer cell line, also consistent with our previous observations for the AhR-ligand raloxifene [28]. In subsequent evaluation of additional cell lines susceptible to CGS-15943, we identified the triple-negative (ER-/PR/HER2-) MDA-MB-468 cell line. To demonstrate that apoptosis induced by CGS-15943 in these cells required the AhR, we generated a stable cell line expressing a doxycycline inducible shRNA against the AhR and co-expressed with an RFP-reporter (Fig. 7D). Partial knockdown of AhR in these cells (Fig. 7D) led to significantly decreased activation of Caspase 3/7 in response to treatment with CGS-15943 (Fig. 7E). In addition, the AhR knockdown in MDA-MB-468 cells significantly rescued the decreased cell viability seen with CGS-15943 (Fig. 7F).