Intravenous Administration of Umbilical Cord Mesenchymal Stromal Cells in Advanced-stage Critical COVID-19: a Case Report

doi:10.21203/rs.3.rs-132721/v1

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Intravenous Administration of Umbilical Cord Mesenchymal Stromal Cells in Advanced-stage Critical COVID-19: a Case Report

https://doi.org/10.21203/rs.3.rs-132721/v1

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Background: Coronavirus disease 2019 (COVID-19) associated- severe acute respiratory distress syndrome (ARDS) patients may require prolonged mechanical ventilation, thus resulting in lung fibrosis and high fatality rates. Several therapies have been developed in patients with pneumonia requiring oxygen therapy as well as during the early course of invasive mechanical ventilation. Mesenchymal stromal cells (MSCs) may have a role in controlling the hyperinflammatory response seen in such cases and prevent aggravation or increase/accelerate recovery. While MSC-based therapies have been studied mostly in patients that did not require invasive ventilation or during the first hours of tracheal intubation, to date the potential of MSC therapy to treat advanced-stage of severe/critical COVID-19 cases has not been extensively studied.

Methods: This is a case report of a 30-year-old male patient who presented progressive clinical deterioration of COVID-19 in ICU after 21-day admission and 14 days with invasive mechanical ventilation. The first symptom onset was 35 days before MSC therapy. The patient was treated with allogenic human umbilical cord-derived MSCs [5 x 10⁷ (2 doses 2 days interval)].

Results: No serious adverse events attributed to MSC administration were observed during and after the procedure. Oxygenation (PaO2/FiO2 ratio) and the need for vasoactive drugs improved. Chest CT scan imaging, which showed signs of bilateral and peripheral ground-glass, consolidation as well as fibrosis, improved significantly during the time course of the disease. Patient was discharged 13 days after cell therapy. Cytokine analysis demonstrated modulation of different mediators accompanied by modulation of different cell populations in peripheral blood, including a reduction in inflammatory monocytes, increased frequency of patrolling monocytes, CD4+ lymphocytes and type 2 classical dendritic cells (cDC2).

Conclusion: This study described for the first time the effects of MSC therapy in a patient at late stage COVID-19 associated severe lung injury and fibrosis. Therefore, further clinical trials should be design assessing the efficacy of MSC therapy in ARDS patients undergoing prolonged mechanical ventilation due to COVID-19.

Stem Cell & Developmental Cell Biology

COVID-19

ARDS

advanced-stage

mesenchymal stromal cells

cell therapy

immunomodulation

SARS-CoV-2 infections present different phenotypes and clinical presentations [1]. Severe pneumonia and acute respiratory failure occur in a subset of patients that require long-term hospitalization in intensive care units (ICU) and prolonged ventilatory assistance [2]. Patients with severe/critical COVID-19 present a hyperinflammatory and hypercoagulable state that may also compromise multiple organs and systems [3]. Mortality rates reported for COVID-19 patients under mechanical ventilation have varied with age and comorbidities from 19 to 73% [4, 5].

Currently, there is no specific treatment to cure patients with COVID-19 infection and only dexamethasone has been shown to decrease mortality [6]. Despite significant therapeutic advances with increased knowledge and definition of standard protocols, critical COVID-19 remains a life-threatening disease and novel therapeutic strategies are urgently needed. Moreover, the pandemics continue to accelerate even in countries where the first wave was effectively controlled at first [7]. In this context, cell-based therapies are promising approaches, especially for severe/critical COVID-19 cases [8].

Mesenchymal stromal cells (MSCs) have been evaluated in compassionate use or clinical trials to treat COVID-19 pneumonia [9–18]. The rationale is to direct the immunomodulatory properties of MSCs to control the hyperinflammatory state and improve respiratory function. There are currently over 40 studies registered in clinicaltrials.gov database and a few published case reports or small case series. Most protocols, however, include patients at early-stage disease or shortly after orotracheal intubation. Little attention, however, has been given to late-stage critical cases of COVID-19, in which extensive damage to the lung has already occurred and a fibrotic scar begins to form. Here we report a case of a 30 years-old patient with advanced-stage critical COVID-19 that was successfully treated with umbilical cord-derived MSCs (UC-MSCs).

Case presentation

A 30 years old male patient with no known comorbidities presented on Jun 6th with myalgia, headache, shortness of breath with moderate efforts at illness day 3, SpO2 > 95%, and a positive test for SARS-CoV-2 by nasopharyngeal RT-PCR. At this point, CT scan showed parenchymal ground glass opacities in up to 25% of the lung parenchyma. The patient was medicated and discharged, returning at illness day 6 with worsened dyspnea, SpO2 = 88% at ambient air, > 50% altered lung parenchyma on CT, being classified as severe [19]. He was admitted in the ICU at São Rafael Hospital, Salvador, Brazil, receiving oxygen therapy, bronchodilators, anticoagulant, methylprednisolone (120 mg/day) and antibiotics (ceftriaxone + azithromycin). The patient was treated with high-flow nasal oxygen, non-rebreathing mask and required pronation to sustain SpO₂, but did not respond, progressing with desaturation, respiratory acidosis and septic shock, requiring orotracheal intubation on illness day 15, being clinically diagnosed with critical COVID-19. Laboratory testing was consistent with cytokine storm, with reduced lymphocyte counts, increased C-Reactive Protein (CRP), D-dimer, lactate dehydrogenase (LDH), fibrinogen and ferritin, along with PaO₂/FiO₂ < 200. The patient required vasoactive drugs to keep mean arterial pressure above 65 mmHg. On the following days, serial SARS-CoV-2 RT-PCR results were persistently positive and secondary infections with Stenotrophomonas and Klebsiella pneumoniae were detected in the tracheal aspirate, treated with antibiotics. Tracheostomy was performed on Jun 29th. Patient presented clinical deterioration on illness day 30 and CT imaging demonstrated radiological worsening with an acute respiratory distress syndrome (ARDS) pattern, lesions affecting > 75% of lung parenchyma and foci of interstitial fibrosis. A cell therapy protocol with UC-MSCs was then applied in a compassionate use basis, following informed consent given by the patient’s family.

UC-MSCs

MSCs were obtained from the umbilical cord tissue at a cGMP facility at the Center for Biotechnology and Cell Therapy, São Rafael Hospital and cryopreserved at passage 3 in 50 ml of a cryopreservation solution containing Plasmalyte, 3% human albumin and 5% dimethyl sulfoxide (DMSO) and stored in cryobags at <-135^oC. MSC's identity was assessed by flow cytometry (Stemflow Human MSC Analysis kit, BD Biosciences) and in vitro trilineage differentiation assays (StemPro Osteogenesis and Adipogenesis kits, ThermoFisher Scientific) (Figure S1A-E). Genetic stability was evaluated by G-band karyotype, as previously described [20] (Figure S1F). Sterility was evaluated by culture for anaerobic, aerobic bacteria and fungi, endotoxin levels and Mycoplasma test. Potency was evaluated by measuring IDO1 mRNA expression by RT-qPCR after stimulation with IFNγ (Figure S1A), as described previously [21]. Finally, product hemocompatibility was tested by evaluating tissue factor (CD142) expression by flow cytometry and by performing thromboelastography studies in citrate blood samples obtained from three different donors, as previously described (Figure S1B-E) [22]. Finally, cell viability was checked before cryopreservation, 48 h after, and at the time of infusion, by flow cytometry with 7AAD (BD Biosciences).

Procedures

Approximately 30–60 min before the infusions, the patient received 50 mg diphenhydramine to prevent infusion-related allergy. The cells were thawed in a 37^oC water bath and immediately taken to the patient bedside for intravenous infusion, via gravity, over 30–40 minutes. The patient was followed up by daily clinical evaluations and laboratory testing. Radiological evaluation was performed by serial chest X-rays and CT scans. Additionally, blood samples were collected on d1 (pre-infusion), d3 and d7 for evaluation of cytokines and chemokines by Luminex and immune cell populations by flow cytometry (d1, d3, d7 and d14; antibody information in Table S1). To evaluate the overall profile of biomarkers, an unsupervised hierarchical cluster with luminex and flow cytometry assay values was performed using Ward’s method. In this analysis, the dendrograms represent the Euclidean distance (inferring degree of similarity). The values were normalized using Z-score method. To calculate a fold-change, d1 was used as reference.

UC-MSCs are characterized according to their ability to adhere to plastic, and high expression (> 95%) of CD90, CD105, CD44 and CD73, and low expression (< 2%) of CD45, CD34, CD117 (Figure S1E) and also by their in vitro adipogenic, osteogenic and chondrogenic differentiation, with a normal karyotype (Figure S1F) [23].

Two intravenous administrations of UC-MSCs (50 million cells/infusion) were performed at days 30 and 32. The infusions were well-tolerated, and no adverse events were observed. Patient showed a rapid improvement in oxygenation, requiring progressively lower levels of vasopressors until hemodynamic stability without vasopressors was achieved 9 days post the UC-MSC infusion. The patient was discharged 13 days after UC-MSC infusion. Variations in PaO₂/FiO₂, SOFA score, lymphocyte counts, CRP, ferritin, and D-dimer, along with the dynamic changes seen in chest CT are shown (Fig. 1). Control CT Scan showed significant absorption of bilateral pulmonary infiltrate, maintaining only retractable opacities.

In order to evaluate possible mechanisms of action of MSCs in immune cells and soluble mediators, we performed Luminex and flow cytometry analyses. An unsupervised hierarchical analysis was performed with Luminex data, and three clusters of plasma biomarkers were established. On the first and second clusters a slight increase in plasma cytokine levels was observed on d3, compared to d1. On d7, the levels of most cytokines approached the first measured value (Fig. 2A-B). On the third cluster the increase was more accentuated and was maintained at d7 (Fig. 2A). For each cluster we performed an enrichment analysis on the NCI Nature database. The first was enriched mainly to regulation of transcription and signaling process in lymphocytes. The second was enriched to IL-27, calcium and IL-23 signaling. While the third was enriched to IL-12 signaling events (Fig. 2B). The biomarkers that showed the greatest discrepancies (+-0.4-fold change) at the d3 were IL-2RA, IL-18, IL-6 and M-CSF (Fig. 2C).

Flow cytometry analysis demonstrated that, up to seven days following treatment initiation, classical monocytes (CD14⁺⁺CD16⁻) were enriched in the peripheral blood, whereas on d14, patrolling monocytes (CD14⁺CD16⁺⁺) were the most prevailing monocyte subpopulation (Fig. 3A). Substantial alterations of chemokine receptors expression over time post-treatment, with an increase on CCR5⁺ receptors and decrease of CCR7⁺ (Fig. 3B). Additionally, the degree of monocyte activation was substantially altered following treatment in the inflammatory monocyte subpopulation, where it is possible to observe a decrease in these activated monocytes on d3 and d7, with subsequent increase on d14, where the profile is similar to baseline (Fig. 3C). Regarding monocyte polyfunctionality in response to a TLR-4 agonist (LPS, 1µ g/mL), there was a peak of multiple cytokine producer monocytes on d3, suggesting higher polyfunctional activity on this period (Fig. 3D-F).

The frequencies of CD4⁺ and CD8⁺ T-cells in peripheral blood presented similar changes over time. In both cases there was observed a slight increase at d3, with progressive reduction at d7 and d14 (Fig. 4A). The evaluation of differential chemokine receptor expression of CCR6 and CXCR3 on circulating CD4⁺ lymphocytes revealed higher frequencies of CXCR3⁻CCR6⁻ (Th2) subpopulation following treatment (Fig. 4B). In activated cells the profile changes, and CXCR3⁺CCR6⁻ are more frequent (Fig. 4C). Interestingly, the patient exhibited a reduction in naïve CD4⁺ T cells frequencies over time along with increased frequencies of terminally differentiated CD4⁺ T cells (Fig. 4D). Activated TCD4⁺ cells were more terminally differentiated and effector in the first day, comparting with the other days (Fig. 4E). Of note, conventional dendritic cells 2 (cDC2) frequency peaked on day 3 after treatment, returning to basal levels afterwards (Fig. 4E).

MSC-based therapy protocols to treat COVID-19 have been directed mainly to patients with moderate and severe clinical presentations [9–18]. Few numbers of studies included critically ill patients with COVID-19 under invasive mechanical ventilation [24–26]. Although preliminary, published data suggests that critically ill patients who presented benefits with the MSC treatment were successfully extubated after receiving MSCs shortly following intubation [24]. Here we report the case of a patient successfully treated with MSCs 14 days after tracheal intubation and invasive mechanical ventilation, in which time association between MSC infusion and amelioration of clinical, oxygenation and laboratory parameters were clearly observed. Importantly, intravenous administration of UC-MSCs was not associated with serious adverse events. This is particularly important in the context of severe/critical COVID-19, due to a thromboinflammatory state [27].

The initial anti-SARS-CoV-2 response starts with the activation of innate immune cells, which function as antigen presenters and produce type I interferons [28]. As the infection progresses and tissue injury increases, an exacerbated inflammatory response, with high levels of pro-inflammatory mediators is seen [29]. Prolonged exposure to a cytokine storm scenario as an expression of dysregulated immune response, leads to macrophage activation syndrome, induced by IL1β [30], defects in the antigen presentation induced by IL-6, decreased HLA-DR expression in monocytes, CD4⁺T cell depletion, rapid spread of the virus and secondary organ dysfunction [31]. Poor innate immune response in severe COVID-19 was recently characterized as immune paralysis, resembling some characteristics of bacterial sepsis [32]. Our results demonstrate that, after MSC therapy, monocytes increased HLA-DR expression and showed increased ability to respond to TLR4 ligand stimulation. We also observed a marked increase in the frequency of cDC2, accompanied by a transient increase in serum levels of different cytokines that are involved in antigen presentation, antiviral response and differentiation of effector CD4⁺ T cells [33]. Interestingly, one of the upregulated pathways found was IL-27 signaling, and dendritic cell-derived IL-27 has been associated with induction of Treg in lung parenchyma and resolution of immunopathology upon infection with respiratory viruses [34].

After d3, we observed a reduction in proinflammatory cytokines, and in the subset of naïve CD4⁺ T cells, along with increased frequencies of the terminally differentiated subset with Th2 markers. Finally, after d7, we observed increased frequency of patrolling monocytes, a population involved in the resolution of inflammation and healing [35], which migrates to the lungs, differentiate into CD11c⁺, resident lung macrophage and act in a specialized way as effector cells [36]. In addition, patrolling monocytes respond strongly to viruses via TLR7/8-MEK pathway, producing cytokines such as TNFα and IL1β, as well as CCL5 and CXCL10 chemokines [37, 38].

The results of this case report support a potential role for MSC-based therapies not only in the early stages of COVID-19, as has been extensively explored, but also in advance -stages of critical disease facing clinical deterioration. Administration of UC-MSCs at day 30 of illness, and 14 days after orotracheal intubation, was still safe and associated with a significant change in the clinical course. Further clinical studies with proper design and sample size are required to confirm the efficacy of MSC-based therapies in advanced-stages of severe/critical COVID-19.

CT – computed tomography; RT-PCR: Reverse transcription polymerase chain reaction; cGMP – current good manufacturing practices. Remaining abbreviations are cited in the text.

Ethics approval and consent to participate:

The present study has been approved by the Ethics committee of São Rafael Hospital and CONEP and written consent to participate was given by the patient’s family.

Consent for publication:

Written informed consent for publication of their clinical details and/or clinical images was obtained from the patient/parent/guardian/relative of the patient. A copy of the consent form is available for review by the Editor of this journal.

Availability of data and material:

The data that support the findings of this study are available from the corresponding author upon reasonable request.

Competing interests:

The authors have no competing interest.

Funding:

Serrapilheira Institute, D’Or Institute for Research and Education, CNPq and CAPES.

Authors’ contributions:

Souza BSF and Rocco PR: conception and design, provision of study material, data analysis and interpretation, manuscript writing, financial support, final approval of the manuscript. Gobatto ALN, Passos RH performed the cell infusions, clinical evaluation, data collection and analysis. Martins GLS and Pinheiro PCG: data collection and analysis. Silva KN, Paredes BD, França LSA and Nonaka CKV: cell manufacturing, characterization and product quality control. Cruz FF and Castro-Faria-Neto HC: Luminex experiments and cytokine analysis. Andrade BB, Barreto-Duarte B, Araújo-Pereira M and Santos RTT: flow cytometry evaluation, data analysis and interpretation.

Acknowledgements:

This study was supported by grants from Serrapilheira Foundation, D’Or Institute for Research and Education (IDOR), CNPq and CAPES. The authors thank Ms. Alice Andrade for technical support in sample processing and handling. We also thank the healthcare team at the ICU of São Rafael Hospital for the support.

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SupplementalFigure1.tif
Supplemental Figure 1. Characterization of UC-MSCs. Phase contrast microscopy imaging of UC-MSCs cultured with growth media (A), or exposed to (B) adipogenic, (C) osteogenic or (D) chondrogenic differentiation media. Differentiation was confirmed by Oil red (B), Alizarin red (C) or Alcian Blue (D) staining. (E) Immunophenotype evaluated by flow cytometry analysis for MSC markers CD90, CD44, CD105 and CD73 and a cocktail of negative markers (CD45, CD34 and CD117). Light histograms represent staining with isotype controls. (D) G-band karyotype representative image of normal (46, XX) karyotype.
SupplementalFigure2.tif
Supplemental Figure 2. Evaluation of potency, hemocompatibility and cell viability. (A) MSCs were evaluated for IFN-γ-induced IDO1 mRNA expression. (B) Tissue factor (CD142) expression was evaluated by flow cytometry. Light histogram represents staining with isotype control. (C and D) Results of thromboelastography analysis using blood/MSC mixture. The analysis was performed with blood donated from three independent healthy donors. Data are represented as mean±SD. INTEM: contact-activated assay to evaluate clot formation via the intrinsic pathway.; EXTEM: a tissue-factor activated assay to evaluate clot formation via the Extrinsic pathway. CT: clotting time; CFT: clot formation time; MCF: maximum clot firmness; * P<0.05. (E) Results of cell viability analysis performed before cryopreservation, 48 h after cryopreservation and at the moment of cell infusion, evaluated by 7AAD flow cytometry assay.
SupplementalTable.docx
Supplemental Table 1: List of antibodies used for flow cytometry analyses

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Intravenous Administration of Umbilical Cord Mesenchymal Stromal Cells in Advanced-stage Critical COVID-19: a Case Report

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Abstract

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Introduction

Methods

Case presentation

UC-MSCs

Procedures

Results

Discussion

Conclusions

List Of Abbreviations

Declarations

References

Supplementary Files

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