Ethics statement
All operations are performed according to the animal care standards of the Chinese National Institute of Health and regulations of Shandong First Medical University Committee for the Care and Use of Laboratory Animals.
Animals and TSCI model
Male C57BL/6 background mice (6-8 weeks) were purchased from the Pengyue Experimental Animal breeding Co., Ltd. (Jinan, China). The animals were housed in a clean cage under conditions of 22-24℃, relative humidity of 30-60%, and a 12-h light/dark cycle, with adequate food and water.
Mice were anesthetized with 3% pentobarbital (30 mg/kg, i.p.), then T8-T10 laminectomy was performed to expose the spinal cord. TSCI model was completed by 68099Ⅱ precision percussion (RWD Life Science, Shenzhen, China; 1m/s speed, 2 mm depth, 1 second dwell time). The success of the model was confirmed by tail spasms and retraction-like flutters of the legs.
Animal experiments
a. Mice were divided into sham and TSCI. The sham and 3 days post-TSCI mice spinal cord tissues were used for gene chip assay to detect the differential expression of mRNA.
b. Mice were randomly divided into 4 groups: sham, negative control (NC), antagomir-21, and antagomir-21+cntfr siRNA. In NC or antagomir-21 groups, antagomir-NC or antagomir-21 (2.5μl, 2μmol/ml) (RiboBio, Guangzhou, China) were intrathecally injected for 3 days (0, 1, 2) after mice were performed to TSCI, and siRNA NC (1μl, 0.5μmol/ml, RiboBio) were intrathecally injected for 1 day (0). In antagomir-21+cntfr siRNA group, after treated intrathecally with antagomir-21, Cntfr siRNA 0.5nmol (1μl, 0.5μmol/ml) were intrathecally injected for 1 day (0). In the sham group, only performed laminectomy.
3 days after TSCI, mice were anesthetized with 3% pentobarbital, then spinal cord tissues were carefully removed after transcardial perfusion. For staining use, the tissues were fixed overnight with 4% paraformaldehyde at 4℃. Then, after dehydrated in xylene and gradient alcohol solutions, the tissues were embedded in paraffin. For gene chip analysis, qRT-PCR, and western blotting use, the sample was quickly placed in a frozen tube and put in liquid nitrogen, or directly extracted total RNA or protein.
mRNA gene chip assays
The tissues were extracted from sham and 3 days post-TSCI mice and frozen in liquid nitrogen. Gene chip assays were performed by Genechem Co. (Shanghai, China).
Bioinformatics analysis
PicTar (https://pictar.mdc-berlin.de/), TargetScan (http://www.targetscan.org/mmu_72/), miRanDa (http://www.microrna.org/microrna/getDownloads.do) bioinformatics were used to predict potential target genes of miR-21a-5p.
Cell culture and transfection
Cells were cultured in Dulbecco’s modified essential medium (Gibco, China) with 10% fetal bovine serum (Gibco, Australia), and 1% penicillin-streptomycin (Solarbio, China), and were placed in a humidified incubator with 5% CO2 at 37 ℃.
Primary mouse astrocytes were extracted from 1-3 days C57BL/6, the brain and spinal cord were dissected layer by layer; the brain and spinal cord were separated; removed the meninges and blood vessels, and the brain and spinal cord were extracted. After being fragmented, tissues were digested with trypsin (Solarbio) at 37 ℃ for 15 minutes. And the cell suspension was centrifuged and re-suspended in the cell culture solution. An 1h pre-plating step was performed to further remove fibroblast. The unattached astrocytes were planted in a 100mm dish. The 3rd-generation astrocytes were used for researches.
For transfection, miR-21 mimic, inhibitor or negative control, and (or) Cntfr siRNA or siRNA NC (RiboBio, Wuhan, China) were transfected into astrocytes when they were 50%-70% density. The transfection was performed with the help of opti-MEM (gibco) and Lipofectamine®2000 Reagent (Invitrogen, ThermoFisher, Shanghai, China). And then, after pretreatment with CNTF (100ng/ml, PeproTech) for 24h, cells were treated with IL-1α (3ng/ml, PeproTech), TNF-α (30ng/ml, PeproTech) and C1q (400ng/ml, CUSABIO) for inducing into A1s. RNA or protein was extracted for subsequently use.
RNA extraction and quantitative real-time polymerase chain reaction (qRT-PCR)
TRIzolTM (Accurate Biology, Hunan, China) was used to extract total RNA from astrocytes or spinal cord tissue. The SpectraMax®QuickDropTM spectrophotometer was used for detecting the concentration of total RNA. The total RNA was stored at -80℃ or directly used.
Mir-XTMmiRNA First-Strand Synthesis Kit (Takara, Dalian, China) and miR-21a-5p primer (Takara) were used to detect the expression level of miR-21a-5p, and U6 was used as an endogenous control to normalize the results. The 1000ng total RNA was prepared for reverse transcription using Exo M-MLV RT Kit with gDNA Clean for qPCR II (Accurate Biology). We performed qRT-PCR with the SYBR®Green Premix Pro Taq HS qPCR Kit (Accurate Biology) at LightCycler®480II Fast Real-Time PCR System (Roche, Switzerland). GAPDH was used as an endogenous control to normalize the results. The results were calculated with the value 2-ΔΔCT. The primer pairs used are in Table. 1.
Protein extraction and western blotting
Astrocytes or spinal cord tissue were lysed by RIPA (Solarbio) with 1% PMSF (Beyotime Biotechnology, Shanghai, China) and 1% Phosphatase Inhibitor Cocktail 100X (CWBio, Beijing, China). The concentration of protein was measured by BCA detection kit (Beyotime Biotechnology). The protein was stored at -80 ℃ or directly used.
The protein samples were separated in SDS-PAGE gel (Beyotime Biotechnology) and transferred to polyvinylidene difluoride membranes (Millipore, USA). After blocking in 5% Skim milk powder (BioFroxx, Germany) at room temperature for 1 hour, membranes were incubated with primary antibodies at 4℃ overnight. The next day, after washing with PBST, membranes were incubated with secondary antibodies at room temperature for 1h. Finally, images were detected by FluorChem M (ProteinSimple, USA).
Antibodies used were as follows:
CNTFR α (1:1000, Santa Cruz, USA), Phospho-STAT3 (p-Stat3, 1:2000, Cell Signal Technology, USA), STAT3 (1:1000, Cell Signal Technology), iNOS (1:1000, Cell Signal Technology), Complement component 3 (C3, 1:50, Abcam, UK), S100a10 (1:1000, Abcam), β-actin (1:5000, ZSGB-Bio, Beijing, China), goat anti-rabbit secondary antibody (1:5000, ZSGB-Bio), goat anti-mouse secondary antibody (1:5000, ZSGB-Bio), goat anti-rat secondary antibody (1:5000, ZSGB-Bio).
Enzyme-linked immunosorbent assay (ELISA)
The concentration of IL-1β released by A1s was detected by Enzyme-linked immunosorbent assay (ELISA) for quantitative detection of mouse IL-1β Kit (Invitrogen, ThermoFisher Scientific). The experimental operation was performed according to the protocol of the kit. The colorimetric optical density (OD) was measured by SpectraMax®i3x enzyme labeling instrument (Molecular Devices, USA).
Dual-luciferase reporter assay
HEK 293t cells were planted in a 24-well plate. For the construction of plasmids, WT or MUT Cntfr α 3'UTR fragments were inserted into PmirGLO Dual-Luciferase miRNA Target Expression Vector (BioSune, Jinan, China). Then, plasmids, miR-21a-5p mimic, inhibitor, and negative control were transfected into HEK 293t cells. After 48 hours, added 1 × PLA cell Lysis Buffer and shaken to lyse the cells at room temperature for 15min, then collected the cell lysate. 20μl cell lysate was added to a dedicated 96-well plate, then 100μl LARII and 100μl Stop & Glo®Reagent were added in turns by the Centro XS3 LB 960 (Berthold, Germany) and MikroWin software to detect the firefly luciferase activities and Renilla luciferase activities respectively. We completed this experiment using the Promega Dual-Luciferase system (Promega, Madison, USA). The difference of luciferase activity between firefly and Renilla was calculated and analyzed.
RNA pull-down assay
Mus-Cntfr in pcDNA3.1 (+), antisense-MUT-Cntfr in pcDNA3.1 (+), and pcDNA3.1 (+) were linearized with restriction enzymes, then used for in vitro transcription. In in vitro transcription, we used the MEGAscript T7 Kit (Ambion, Thermo Fisher Scientific, Shanghai, China) and biotin 16 UTP (Ambion, Thermo Fisher Scientific, Shanghai, China) for biotin-labeled RNA transcripts. MEGA clear Kits (Ambion, Thermo Fisher Scientific, Shanghai, China) were used for purification in vitro. 3μg of biotinylated RNA was heated at 90 °C for 5 min and then laid at room temperature for 30 min, then cooled to 4 °C. RNA was mixed with 1 mg protein extracted from astrocytes, incubated with shaking at room temperature for 3 h. Each binding reaction was added with 60μl streptavidin agarose beads (Invitrogen, Thermo Fisher Scientific, Shanghai, China) and incubated with a rolling shaker at room temperature for 2h. Then, a qRT-PCR assay was used to detect the expression of miR-21a-5p in pull-down RNA.
Immunofluorescence
For astrocytes, the cells planted in a 24-well plate were washed with PBS 3 times, treated with 4% paraformaldehyde (Solarbio) for 15 min, 0.5% Triton X-100 penetrated for 10 min, and then blocked with 10% normal goat serum (Solarbio) for 1 hour. Then, cells were incubated with primary antibody at 4℃ overnight. The next day, samples were incubated with secondary antibodies for 30min at room temperature. Finally, Antifade Mounting Medium with DAPI (Beyotime Biotechnology) was used for sealing.
Spinal cord tissues were sectioned after paraffin embedding. After treated with Environmentally friendly transparent dewaxing liquid (Solarbio) for deparaffinizing, slices were hydrated in 100%, 95%, 90%, 80%, 70% ethanol solution in turns. Then, sections were heated in citrate buffer for 15min for antigen retrieval. The procedure of staining was the same as that was performed in cells.
An upright fluorescence microscope (Olympus, Tokyo, Japan) was used for obtaining images.
Antibodies used were as follows:
Mouse anti-GFAP (1:200, Cell Signal Technology, USA), Rat anti-C3 (1:20, Abcam, UK), Rabbit anti-S100a10 (1:200, Abcam), Alexa Fluor®488 goat anti-mouse IgG (1:200, Abcam), Alexa Fluor®594 goat anti-rat IgG (1:200, Abcam), Alexa Fluor®594 goat anti-rabbit IgG (1:200, Abcam).
Immunohistochemistry
After antigen retrieval (see in Immunofluorescence), spinal cord tissues were incubated in 3% H2O2. Then, sections were blocked with 3%BSA (BioFroxx) at room temperature for 1 hour. The slices were incubated with rat anti-C3 (1:20, Abcam, UK) primary antibodies at 4℃ overnight. The next day, after washed with PBS 3 times, goat anti-rat secondary antibody (1:200, ZSGB-Bio) was used for incubating at room temperature for 30 minutes and stained with 3,3’-diaminobenzidine tetrahydrochloride (DAB, ZSGB-Bio). Next, sections were stained with hematoxylin (Solarbio) and differentiated with alcohol-HCl. After rinsing with tap water, slices were dehydrated in 70%, 80%, 90%, 95%, and 100% ethanol solution in turns, and made transparent with Environmentally friendly transparent dewaxing liquid (Solarbio). Then sealed with neutral gum and dried. Images were obtained with an upright fluorescence microscope (Olympus, Tokyo, Japan).
Chromatin immunoprecipitation (ChIP)
ChIP assay was performed according to the manufacturer’s protocols in Chromatin Extraction Kit (Abcam) and ChIP Kit Magnetic-One Step (Abcam). The chromatin was extracted from astrocytes and sonicated into 200-1000bp fragments. Then, the chromatin was immunoprecipitated with the anti-p-Stat3 antibody. The primer sequences of Nkrf promoter were as follows: Forward: 5’-AACCCCTTTCCAAGGACACAG-3’; Reverse: 5’-AGACTCCTGGTAGGGGACTC-3’. The precipitated chromatin was used for qRT-PCR or PCR. The 100~150 bps PCR products were electrophoresed through a 2% agarose gel (baygene, Beijing, China) with GelRed™ Nucleic Acid Gel Staining solution (biosharp, China), and visualized in UV illumination with FluorChem M (ProteinSimple, USA).
Statistical analysis
GraphPad Prism v8.0 software (La Jolla, CA, USA) and SPSS v22.0 software (IBM, Chicago, IL, USA) was used for statistical analysis. Differences between two groups were analyzed by Student's t-test. Data were presented as mean ± standard deviation (SD). One-way analysis of variance (ANOVA) with Bonferroni’s tests was performed for comparisons between multiple groups. P < 0.05 showed statistical significance.