Animals
Male C57BL/6 mice at 3 months of age were obtain from laboratory animal center of Medicine College of Xi'an Jiaotong University and kept in the sterile cages under controlled conditions (20 ± 2ºC, humidity 40–50%, cycle 12h/12h light/dark) with free access to food and water. Mice were randomly divided into six groups (n = 8 per group): control group, high fat diet (HFD) group, HFD + QUE group, HFD + QUE + Lenti-NC + Scramble group, HFD + QUE + Lenti-METTL3 + Scramble group and HFD + QUE + Lenti-NC + PRKD2 siRNA group. The mice of control group were feed with a normal chow diet, which contained 70% carbohydrate calories, 20% protein calories, and 10% fat calories. HFD contained 20% carbohydrate calories, 20% protein calories, and 60% fat calories. For QUE treatment, HFD-fed mice for 8 weeks were intraperitoneally injected with QUE (10 mg/kg) daily for 10 weeks. Lenti-METTL3 and Lenti-NC were purchased from GeneChem (Shanghai, China) and injected to mice via the tail vein once a week for four weeks (1×109 units/100µL). Small interfering RNA targeting serine-threonine kinase protein kinase D2 (PRKD2 siRNA) were injected intraperitoneally into mice at 2mg/Kg. All mice were fasted for 12 h before sampling. After experiments, the mice were anaesthetized with an intraperitoneal injection of pentobarbital sodium (80 mg/Kg), and were euthanized with an intraperitoneal injection of excessive sodium pentobarbital. The research was approved by the ethics committee of the Second Affiliated Hospital of Xi’an Jiaotong University.
Cell Lines and reagents
Mouse myoblast cell line C2C12 was purchased from Shanghai Institute of Biochemistry and Cell Biology (Shanghai, China). Cells were cultured in Dulbecco’s Modified Eagles Medium (DMEM, Gibco, Rockville, MD), containing with 10% fetal bovine serum (FBS, HyClone, Salt Lake City, UT) and 1% penicillin-streptomycin (Sigma, St. Louis, MO, USA) at 37℃ in a humidified atmosphere of 5% CO2. QUE (purity ≥ 95%, CAS NO:117-39-5) and PA (purity ≥ 99.0%, CAS NO: 57-10-3) were purchased from Sigma (St Louis, MO, USA). 2-[N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl) amino]-2-deoxyglucose (2-NBDG) was provided by YUBO biologycal (Carlsbad, CA, USA). Human insulin was purchased from Santa Cruz Biotechnology (Shanghai, China).
Glucose tolerance test (GTT) and insulin resistance test (IRT)
Glucose and insulin tolerance tests were conducted in mice after fasting for one night. Briefly, mice were intraperitoneally injected with glucose at a dose of 2 g/Kg body weight, and blood samples were collected from the tail tip at the time points of 30, 60, 90 and 120 min. For IRT, the mice were received an intraperitoneal injection of 0.75 IU/kg insulin, and blood glucose concentrations were measured after 30, 60, 90 and 120 min respectively. Glucose levels were analyzed with glucometer (Yuyan Instruments, Shanghai, China). The insulin resistance index was calculated using the equation: homeostasis model assessment of IR (HOMA-IR) = blood glucose (mmol/L) × serum insulin (µU/mL)/22.5.
Measurement of triglyceride (TG), superoxide dismutase (SOD), antioxidant no-enzymatic (GSH) and oxygen species (ROS)
TG levels from mouse plasma were measured using an ELISA kit (ab65336, Abcam, Cambridge, UK). The levels of SOD and GSH from C2C12 cell suspensions and mouse skeletal muscle lysates were measured using ELISA under standard conditions, according to the manufacturer’s instructions on the reagent kits. ROS content was detected with ROS assay kit (ab113851, Abcam, Cambridge, UK). The absorbance at the corresponding wavelength was measured with a microplate reader (Molecular Devices, Sunnyvale, CA, USA).
Cell viability assay
Cell survival experiment was performed with a cell counting kit-8 (CCK-8) assay (Bio-Rad, Hercules, CA, USA). Cells were treated with different concentrations of QUE (final concentrations of 0, 5, 10, 15, 20 µM). After 24 h of co-incubation, 10 µL of CCK-8 solution was added to each well for another 4 h at 37℃. The absorption values were detected with a microplate reader (Molecular Devices, Sunnyvale, CA, USA) at 450 nm.
Cell transfection
Overexpression plasmid of METTL3 (pcDNA-METTL3), small METTL3 siRNA, PRKD2 siRNA, and their corresponding negative controls were purchased from RiboBio (Guangzhou, China). The siRNA sequences were as follows: METTL3 siRNA, 5′-GGC ACU UGG AUU UAA GGA ATT-3′; PRKD2 siRNA, 5′- AAG UCU CAG GAG CGA UGG CAC-3′; Scramble, 5’-CGA GGG ATG AGC CCG CGT AG-3’. Cell transfection were performed with the Lipofectamine 3000 Transfection Reagent (Invitrogen, Carlsbad, USA) according to the manufacturer’s instructions. After transfection for 48 h, cells were harvested for subsequent experiments.
Glucose uptake assay
Glucose uptake assay was performed using the fluorescent D-glucose analog 2-NBDG to monitor intracellular glucose uptake. C2C12 cells were seeded in 96-well plates at a density of 4×105 cells/well for 24 h. Then cells were incubated with 2-NDBG (a final concentration of 100 mM) for another 2 h. After different treatments, free 2-NBDG was washed with PBS and then 200 µL of DMSO was added to each well to lyse the cell membrane. The fluorescence intensities were measured at an excitation wavelength of 488 nm and an emission wavelength of 520 nm with a fluorescence microplate reader (Molecular Devices, CA, USA).
Reverse Transcription‑quantitative PCR (RT‑qPCR)
Total RNA from skeletal muscle tissues or cells was extracted using Trizol reagent (Invitrogen, Carlsbad, USA) under the manufacturer’s instructions. TaqMan microRNA Reverse Transcription Kit (Applied Biosystems, Foster City, USA) was used to synthesize cDNA in a 25 µL reaction volume containing 12.5 µL SYBR Premix Ex Taq Ⅱ, 1.0 µL of RT primer, and 1 µL cDNA sample, and 10.5 µL double distilled H2O. RT-qPCR was performed at 95℃ for 2 min, followed by 40 circles at 95℃ for 15 s and 30 s at 60℃ and dissociation at 95℃ for 30 s. GAPDH was acted as an internal reference. Data were analyzed using the 2−ΔΔCT method. The following primers were used: METTL3 (forward 5′-3′: AGC CTT CTG AAC CAA CAG TCC; reverse5′-3′: CCG ACC TCG AGA GCG AAAT); PRKD2 (forward 5′-3′: AGA GCC AGG TAA CAG GAA CAA TAG; reverse 5′-3′: GTG CTA AGG AGG GAG GCT CT); GAPDH (forward 5′-3′: GGA CCT GAC CTG CCG TCT AG; reverse 5′-3′: GTA GCC CAG GTA GCC CTT GA).
m6A MeRIP-qPCR
Total RNA from C2C12 cells was isolated using PolyATtract mRNA isolation systems (Promega, Madison, USA). Then, mRNA was denatured at 70℃ for 10 min, and 5 µL of anti-m6A antibody (ab208577, Abcam, Cambridge, UK) or anti-IgG (ab172730, Abcam, Cambridge, UK) was conjugated to protein A/G magnetic beads in IP buffer (150 mM NaCl, 10 mM Tris-HCL, and 0.1% NP-40) for 2 h at 4 ℃. A total of 100 ng RNA was incubated with antibodies in a buffer containing RNase inhibitor and protease inhibitor. m6A RNA was eluted with 6.7 mM of N6-methyladenosine 5’-monophosphate sodium salt (Sigma, St. Louis, MO, USA) for 1 h at 4 ºC. Total RNA was eluted with elution buffer and purified by phenol chloroform extraction. The enrichment of m6A was determined with RT-qPCR analysis. Fold enrichment was calculated by calculating the 2−ΔCt of eluate relative to the input sample.
Total RNA methylation quantification
Total RNA from C2C12 cells was extracted using TRIzol reagent (Invitrogen, Carlsbad, USA). m6A level in the total RNA was measured with a commercial m6A RNA methylation quantification kit (ab185912; Abcam, Cambridge, UK). In briefly, 200 ng of RNAs were added into each assay well, followed by a capture antibody solution and a detection antibody solution, respectively. Colorimetric quantification was analyzed through reading the absorbance at 450 nm wavelength, and the level of m6A of each sample was colourimetrically measured according to the standard curve.
Hematoxylin-Eosin (HE) Staining
Liver tissues were fixed in 4% paraformaldehyde overnight and then embedded in paraffin. Slices of liver sections were dewaxed with xylene, then dehydrated in ethanol. The slices were stained with HE (Synthgene, Nanjing, China). The histological images were captured by an inverse microscope equipped with an LCD camera (Olympus, Tokyo, Japan).
Immunofluorescence analysis
C2C12 cells were fixed with 4% paraformaldehyde for 15 min and then cells were permeabilized using Triton X-100 (0.1%) and subsequently blocked with 5% goat serum for 2 h at room temperature. Next, primary antibody anti-PRKD2 (ab51250, Abcam, Cambridge, UK) was added and cultivated overnight at 4 ℃. Alexa fluor 488 fluorescein conjugated secondary antibody (ab150077, Abcam, Cambridge, UK) was replenished and incubated at room temperature for 1 h. Finally, DAPI was incubated at room temperature for 10 min. Fluorescence intensity was evaluated by fluorescence microscopy (MF43-N, Mshot, China).
Western blotting
Total protein from skeletal muscle tissues and C2C12 cells were extracted with Radio Immunoprecipitation Assay lysis buffer (Beyotime, Shanghai, China) for 30 min 4℃, and protein concentration was quantified by using an Enhanced BCA Kit (Beyotime, Shanghai, China). Protein samples were separated on 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis and transferred to polyvinylidene difluoride membranes (Millipore, Bedford, USA). After blocked with 5% skim milk at room temperature for 1 h, membranes were incubated with primary antibodies against METTL3 (1:1000, ab195352, Abcam, Cambridge, UK), PRKD2 (1:500, ab51250, Abcam, Cambridge, UK), GLUT4 (1:2000, ab33780, Abcam, Cambridge, UK), IRS1 (1:1000, ab232463, Abcam, Cambridge, UK), p-ser307-IRS1 (1:250, ab1194, Abcam, Cambridge, UK), protein kinase B (AKT; 1:1000, ab8805, Abcam, Cambridge, UK), p-AKT (p-AKT; 1:1000, ab38449, Abcam, Cambridge, UK). Then membranes were washed by using TBST for 3 times and incubated with a horseradish peroxidase-conjugated secondary antibody (1:5000, ab6721, Abcam, Cambridge, USA) for 1 h at room temperature. After washing, chemiluminescent reagent was used to detect protein bands. And signals were visualized using a chemiluminescence imaging system (Bioshine ChemiQ 4800 mini, Oxiang, Shanghai, China).
Statistical Analysis
All experiment were repeated 3 times independently and all data were reported as the mean ± SEM using GraphPad Prism 7.0 statistical software (GraphPad Software, La Jolla, CA, USA). One-way analysis of variance (ANOVA), followed by Tukey’s multiple comparisons test was used for comparisons between three groups. ** P<0.05 was regarded significant difference.