Study Design and Site
A community-based, cross-sectional survey was conducted in three villages of lower Moshi in Moshi district, Kilimanjaro region of Tanzania. Data were collected between March and June 2020 involving 3 villages, namely Mikocheni, Chemchem, and Arusha Chini. Lower Moshi is located on the southern foothills of Mount Kilimanjaro (Figure 1). On the west, Lower Moshi is bordered by the Kikuletwa River, Hai District, and Manyara Region. To the east Lower Moshi borders Mwanga district. Lower Moshi elevation ranges between 700 and 800 m above sea level. The main Rift Valley Fever vectors in this area are Culex spp, Mansoniaspp, Anopheles spp, and Aedes spp[19]. Numerous water streams cross the area and they form the irrigation channels for rice and sugar cane. The rice irrigation schemes have structured and unstructured canal networks; covering an area of about 1,100 hectares. During the rainy season, temporary pools that serve as malaria vector breeding sites are formed. Their persistence beyond the rains contributes to further malaria transmission. The area has two rainy seasons; the long rains which run from March to May and the short rainy season from November to December. The average annual rainfall is about 900 mm per year[20].
Participants and sample collection
Participants in this study were males and females aged between 10 and 70 years, who were either smallholder crop farmers or livestock keepers and willing to participate in this study. Animal sampling was carried out by animal health experts from the Tanzania Veterinary Laboratory Agency (TVLA). Up to 15 goats were selected from each herd by systematic sampling technique where every 3rdand 5th animal was included depending on the size of the herd. Selected animals were manually restrained and 3 ml of blood collected through jugular venipuncture using a vacutainer needle. Human blood sampling was done by expert phlebotomists from the Kilimanjaro Christian Medical Center (KCMC). Three milliliters of blood were collected from the median cubital vein by venipuncture. Each sample from both animals and humans was divided into two aliquots of 1.5 ml each and placed into plain and EDTA vacutainer tubes, respectively. To each sample in an EDTA tube, 4.5ml of Tri Reagent (Zymo Research, Irvine, CA, U.S.A.) were added. The mixture was gently mixed by shaking for 1 minute and immediately shipped to the KCRI biotechnology laboratory at 4°C, for analyses. Demographic data from participants were collected using electronic forms designed using Open Data Kit (ODK)tools (https://opendatakit.org/) deployed in Android tablets.
Mosquito trapping
BG Sentinel trap (BGS) (Biogents AG, Regensburg, Germany) to target outdoor host-seeking adult mosquitoesparticularlyAedes spp, Ochlerotatusspp, Culex spp, Mansoniaspp, and Anopheles spp[21]. BGS traps were used in combination with the BGS-Lure, a dispenser that releases emanations such as those found on human skin (lactic acid, ammonia, and caproic acid)[22]. The BGS-Trap, developed by BioGents GmbH (Regensburg, Germany), consists of an easy to transport, collapsible white bucket with white gauze covering its opening. In the middle of the gauze cover, there is a black tube through which a downflow is created by 12V DC fan that causes any mosquito in the vicinity of the opening tube sucked into a catch bag[22]. Mosquitoes were immediately morphologically identified in the field and consequently sorted according to species, sex, and whether fed or unfed.
Laboratory procedures
RVFV competitive ELISA (cELISA)
Serumwas extracted from the plain vacutainer tubes at the end of eachday by centrifugation of clotted blood at3000 rpm for 5 min. An extracted serum sample was then transferred into 2 ml sterile cryovials using a sterile Pasteur pipette. All serum samples were tested for the presence of antibodies against RVFV using a competitive ELISA (cELISA)using the ID Screen RVFCompetition Multi-Species kit (ID-vet, Grables, France), which detects both IgG and IgM antibodies directed against the RVFV nucleoprotein (NP). Validation tests for the test kit have shown a sensitivity of between 91 and 100% and a specificity of 100%. The cELISA was performed according to the instructions of the manufacturer and as described previously [23, 24]. To control the validity of each plate, the mean value of the two negative controls (ODNC) was computed whereby a plate was considered valid if the ODNC was>0.7. For a valid plate, the mean value of the two positive controls divided by ODNC had to be <0.3. For each sample, the competition percentage was calculated by dividing ODsample/ODNC) × 100. If the value was ≤0.4, the sample was considered positive while a value > 0.5 was considered negative. Only samples that tested positive for cELISA were subjected to RT-qPCR for RVFV detection.
Ribonucleic acid (RNA) isolation, purification, and real-time PCR amplification.
For detection of RVFV RNA in humans and goats, RNA was extracted from Trizol archived blood in EDTA tubes using DirectZol miniprep kit (Zymo Research, Irvine, CA, U.S.A.) by using the Boom method. To isolate RVFV RNA from mosquitoes, pools of 10-50 unfed monospecific female mosquitoes were placed in cryovials and transferred into Lysing Matrix, impact-resistant tubes containing 1.4 mm ceramic beads (MP Biomedicals, CA, USA). Samples were disrupted by bead beating at 10,000 x g for 1min, spun at 1000 g for 10 min at 4°C. The supernatant was transferred into labeled RNase-free tubes. Purification procedures were done using Direct-zol™ RNA miniprep kit (Irvine, CA, U.S.A) following the manufacturer's instructions.
For both human/goat and mosquito samples, RNA concentration and quality check were performed using NanoDrop™ 2000 Spectrophotometer (Thermo Scientific, NY, USA) before storage at -80°C. RVFV RNA was detected using TaqMan probe-based one-step RT-qPCR targeting the RVFV Gn gene as described by Gudo and colleagues [2] using Applied Biosystems ViiA7 PCR platform, Thermo Scientific, NY, USA).
Nature of data and data Analysis
Data analysis was performed using IBM SPSS v.26 (IBM® Corp., Armonk, NY, USA). Descriptive data were presented as frequencies and percentages, means, and medians. Categorical data were reported as a tabulation of proportions and compared between humans and goats. Chi-squared statistic (χ2) was used to examine associations between seropositivity to RVFV and RVFV infection in both humans and goats. Mean IgM and IgG concentrations were compared between humans and goats by paired t-test. Percent positivity to RVFV infection in goats, humans, and mosquitoes were reported as histograms.
Ethical issues
This study obtained approval by the Kilimanjaro Christian Medical University College (KCMUCo) Research and Ethics Committee (CRERC) with approval certificate #2419. This study was also approved by the Kilimanjaro Regional and District Administrative Secretaries, District Medical and Veterinary Officers, and local village and ward executive officers of respective villages. Before commencement of sample collection, written informed consent was obtained from all study participants aged 18 years and above by signing consent forms whereas parents and/or legal guardians of participants under 18 years and participants who could not read or write consented on behalf. All authors hereby confirm that all procedures in this study were approved by CRERC and were performed in accordance with the ethical standards as laid down in the 1964 Declaration of Helsinki. Authors also confirm that all procedures that involved animals in this study were conducted in compliance with the ARRIVE guidelines.