1.
Palmer R, Pfeiffer T, Buss G, Kilen T: Qualitative genetics. In: Soybeans: Improvement, Production, and Uses. Edited by Boerma H, Specht J, 3rd edition edn. Madison, WI: American Society of Agronomy;
2004.
2.
Palmer RG, Payne RC: Genetic-Control of Hypocotyl Pigmentation among White-Flowered Soybeans Grown in Continuous
Light. Crop Sci 1979, 19(1):124-126.
3.
Murai Y, Yan F, Iwashina T, Takahashi R: Analysis of anthocyanin pigments in soybean hypocotyl. Canadian Journal of Plant Science 2016, 96(6):935-938.
4.
Buttery BR, Buzzell RI: Varietal Differences in Leaf Flavonoids of Soybeans. Crop Sci 1973, 13(1):103-106.
5.
Toda K, Yang DJ, Yamanaka N, Watanabe S, Harada K, Takahashi R: A single-base deletion in soybean flavonoid 3 '-hydroxylase gene is associated with
gray pubescence color. Plant Molecular Biology 2002, 50(2):187-196.
6.
Bernard RL: The inheritance of near-gray pubescence color. Soyb Genet Newsl 1975, 2:31-35.
7.
Iwashina T, Benitez ER, Takahashi R: Analysis of flavonoids in pubescence of soybean near-isogenic lines for pubescence
color loci. J Hered 2006, 97(5):438-443.
8.
Wollenweber E: Flavones and flavonols. In: The flavonoids, advances in research since 1986. Edited by Harborne JB. London, UK: Chapman & Hall; 1994: 259-335.
9.
Martens S, Mithofer A: Flavones and flavone synthases (vol 66, pg 2399, 2005). Phytochemistry 2006, 67(5):521-521.
10.
Fliegmann J, Furtwangler K, Malterer G, Cantarello C, Schuler G, Ebel J, Mithofer
A: Flavone synthase II (CYP93B16) from soybean (Glycine max L.). Phytochemistry 2010, 71(5-6):508-514.
11.
Jiang YN, Wang BA, Li H, Yao LM, Wu TL: Flavonoid Production Is Effectively Regulated by RNA1 Interference of Two Flavone
Synthase Genes from Glycine max. Journal of Plant Biology 2010, 53(6):425-432.
12.
Wen ZX, Boyse JF, Song QJ, Cregan PB, Wang DC: Genomic consequences of selection and genome-wide association mapping in soybean. Bmc Genomics 2015, 16.
13.
Bandillo NB, Lorenz AJ, Graef GL, Arquin D, Hyten DL, Nelson RL, Specht JE: Genome-wide Association Mapping of Qualitatively Inherited Traits in a Germplasm Collection. Plant Genome 2017, 10(2).
14.
Bernard RL, Nelson RL, Cremeens CR: USDA soybean genetic collections: isoline collection. Soybean Genetics Newsletter 1991, 18:27-57.
15.
Murray MG, Thompson WF: Rapid Isolation of High Molecular-Weight Plant DNA. Nucleic Acids Res 1980, 8(19):4321-4325.
16.
Cregan PB, Jarvik T, Bush AL, Shoemaker RC, Lark KG, Kahler AL, Kaya N, VanToai TT,
Lohnes DG, Chung L et al: An integrated genetic linkage map of the soybean genome. Crop Sci 1999, 39(5):1464-1490.
17.
Rojas Rodas F, Rodriguez TO, Murai Y, Iwashina T, Sugawara S, Suzuki M, Nakabayashi
R, Yonekura-Sakakibara K, Saito K, Kitajima J et al: Linkage mapping, molecular cloning and functional analysis of soybean gene Fg2 encoding
flavonol 3-O-glucoside (1 --> 6) rhamnosyltransferase. Plant Mol Biol 2014, 84(3):287-300.
18.
Song QJ, Marek LF, Shoemaker RC, Lark KG, Concibido VC, Delannay X, Specht JE, Cregan
PB: A new integrated genetic linkage map of the soybean. Theor Appl Genet 2004, 109(1):122-128.
19.
Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, Newberg LA: MAPMAKER: an interactive computer package for constructing primary genetic linkage
maps of experimental and natural populations. Genomics 1987, 1(2):174-181.
20.
Zhou ZK, Jiang Y, Wang Z, Gou ZH, Lyu J, Li WY, Yu YJ, Shu LP, Zhao YJ, Ma YM et al: Resequencing 302 wild and cultivated accessions identifies genes related to domestication
and improvement in soybean. Nature Biotechnology 2015, 33(4):408-U125.
21.
Robinson JT, Thorvaldsdottir H, Winckler W, Guttman M, Lander ES, Getz G, Mesirov
JP: Integrative genomics viewer. Nature Biotechnology 2011, 29(1):24-26.
22.
Altschul SF, Madden TL, Schaffer AA, Zhang JH, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25(17):3389-3402.
23.
Kumar S, Stecher G, Li M, Knyaz C, Tamura K: MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms. Molecular Biology and Evolution 2018, 35(6):1547-1549.
24.
Higo K, Ugawa Y, Iwamoto M, Korenaga T: Plant cis-acting regulatory DNA elements (PLACE) database: 1999. Nucleic Acids Res 1999, 27(1):297-300.
25.
Fehr WR, Caviness CE, Burmood DT, Penningt.Js: Stage of Development Descriptions for Soybeans, Glycine-Max (L) Merrill. Crop Sci 1971, 11(6):929-&.
26.
Akagi T, Ikegami A, Tsujimoto T, Kobayashi S, Sato A, Kono A, Yonemori K: DkMyb4 Is a Myb Transcription Factor Involved in Proanthocyanidin Biosynthesis in
Persimmon Fruit. Plant Physiology 2009, 151(4):2028-2045.
27.
Liu JY, Osbourn A, Ma PD: MYB Transcription Factors as Regulators of Phenylpropanoid Metabolism in Plants. Molecular Plant 2015, 8(5):689-708.
28.
Gillman JD, Tetlow A, Lee JD, Shannon JG, Bilyeu K: Loss-of-function mutations affecting a specific Glycine max R2R3 MYB transcription
factor result in brown hilum and brown seed coats. Bmc Plant Biology 2011, 11.
29.
Takahashi R, Benitez ER, Oyoo ME, Khan NA, Komatsu S: Nonsense Mutation of an MYB Transcription Factor Is Associated with Purple-Blue Flower
Color in Soybean. J Hered 2011, 102(4):458-463.
30.
Takahashi R, Yamagishi N, Yoshikawa N: A MYB Transcription Factor Controls Flower Color in Soybean. J Hered 2013, 104(1):149-153.
31.
Yan F, Di SK, Takahashi R: CACTA-superfamily transposable element is inserted in MYB transcription factor gene
of soybean line producing variegated seeds. Genome 2015, 58(8):365-374.
32.
Pireyre M, Burow M: Regulation of MYB and bHLH Transcription Factors: A Glance at the Protein Level. Molecular Plant 2015, 8(3):378-388.
33.
Chang YF, Imam JS, Wilkinson ME: The nonsense-mediated decay RNA surveillance pathway. Annual Review of Biochemistry 2007, 76:51-74.
34.
Takahashi R, Githiri SM, Hatayama K, Dubouzet EG, Shimada N, Aoki T, Ayabe S, Iwashina
T, Toda K, Matsumura H: A single-base deletion in soybean flavonol synthase gene is associated with magenta
flower color. Plant Molecular Biology 2007, 63(1):125-135.
35.
Iwashina T, Githiri SM, Benitez ER, Takemura T, Kitajima J, Takahashi R: Analysis of flavonoids in flower petals of soybean near-isogenic lines for flower
and pubescence color genes. J Hered 2007, 98(3):250-257.