1. Animals
Male Sprague-Dawley rats (7 weeks old, weighing 160-220 g) were purchased from the Animal Laboratory in Chongqing Medical University and had free access to food and fresh water at room temperature. Five rats per group were used to ensure adequate power, and rats were randomly allocated into four groups. (1) SONFH group: rats in this group were initially injected with lipopolysaccharide (20 μg/kg; Solarbio, Beijing, China) for 2 days, and then Methylprednisolone (MPS) (60 mg/kg; Pfizer Inc, New York, USA) was injected three times each week in a 24-hour interval for four weeks. (2) SONFH + antagomir (SONFH + AT) group: rats in this group received the same procedure as the SONFH group to establish the SONFH model. Additionally, on the 7th day, rats were anesthetized with 3% pentobarbital sodium (30 mg/kg), and miR-601 antagomir (5 nmol; GenePharma, Shanghai, China) (AT) was injected into the bone marrow cavity of each femur through the femoral intercondylar fossa according to the manufacturer’s instruction. (3) Normal control (Control) group: rats were subjected to normal saline injection and sham operation. (4) SONFH + Metformin (SONFH+Met) group: rats in this group received the same procedure as the SONFH group to establish the SONFH model. Metformin (Solarbio, Beijing, China) was dissolved in drinking water (200 mg/kg) 7 times a week starting on the 7th day, the metformin dosage was converted from the human equivalent dose to the rat dose based on body surface area. The water consumption and body weight of the rats were measured once a week, and the concentration of metformin in the drinking water was adjusted weekly according to changes in water consumption and rat body weight. The rats in all groups were sacrificed at 6 weeks, and the bilateral femoral heads were isolated for subsequent experiments.
2. Source of human femoral heads
Human femoral heads were obtained from patients who underwent total hip arthroplasty (THA) at the First Affiliated Hospital of Chongqing Medical University between 2020 and 2022. (1) SONFH group: SONFH samples were obtained from necrotic areas of the femoral heads of 10 SONFH patients. These patients were classified as grades 3 or 4 according to the Ficat classification system. (2) Femoral neck fracture (FNF) group: FNF samples were obtained from healthy femoral heads of 10 FNF patients. The clinical characteristics of the patients are listed in Supplementary Table 1. All the samples were rapidly stored in liquid nitrogen until they were put to use.
3. Micro-CT
The rat femoral heads were scanned using micro-CT to assess bone mass, density, and trabecular microarchitecture. The femurs were dissected, cleaned, and fixed in 4% paraformaldehyde for 2 days, then scanned using micro-CT with a high-resolution system to evaluate bone repair. The samples were scanned continuously at a resolution of 9 µm per voxel. The 2D images were transferred to CT. A software and the trabecular parameters of the subchondral bone of the femoral head were quantified, including bone volume per tissue volume (BV/TV), trabecular thickness (Tb.Th), trabecular number (Tb.N), and trabecular separation (Tb. Sp).
4. Cell culture and treatments
The human primary BMSCs (hBMSCs) were purchased from Zhong Qiao Xin Zhou Biotechnology (Shanghai, China). hBMSCs were cultured in MSC culture medium (Sciencell, USA) containing 10% fetal calf serum (Gibco, USA) and 1% double-antibody (Biosharp, Guangzhou, China).
For adipogenic differentiation, hBMSCs were induced for 1 week in adipogenic induction medium A consisting of high-glucose DMEM (Gibco, USA) with 10 μg/ml insulin (Beyotime, Shanghai, China), 0.5 mM IBMX (Sigma-Aldrich, Germany), 1 μM dexamethasone (Sigma-Aldrich, Germany), and 200 μM indometacin (Solarbio, Beijing, China). Then, use adipogenic maintenance medium B to maintain adipogenic differentiation of BMSCs for 2 weeks. Adipogenic maintenance medium B consisting of high-glucose DMEM with 10 μg/ml insulin. The medium was changed every 2 or 3 days.
For osteogenic differentiation, hBMSCs were cultured in osteogenic induction medium consisting of high-glucose DMEM (Gibco, USA) with 10-2 M β-sodium glycerophosphate (Solarbio, Beijing, China), 50 μg/mL L-ascorbic acid (Solarbio, Beijing, China), and 10-7 M dexamethasone (Sigma-Aldrich, Germany). The medium was changed every 2 or 3 days.
For induction of hBMSCs senescence, hBMSCs were cultured in induction medium consisting of 5 mL of complete medium [α-MEM (Sigma-Aldrich, Germany), 10% fetal bovine serum, 1% double- antibody]. The control group was added with 1 μL PBS; the modeling group was added with 1 μL H2O2 (Solarbio, Beijing, China), the final concentration of which was 200 μmol/L, the cells in both groups were treated for 24 hours, and then replaced with complete medium to cultivate for 72 hours.
5. Isolation and culture of rat bone marrow-derived MSCs
Bilateral femurs and tibias were harvested under aseptic conditions from SD rats of both control and SONFH groups. The medullary cavity was flushed with low-glucose DMEM (Gibco, USA). Bone marrow tissue was centrifuged at 1000 rpm for 5 minutes to remove suspended adipose tissue. Bone marrow precipitates were then resuspended in complete L-DMEM containing 10% FBS and 1% double-antibody) and cultured at 37 °C / 5% CO2. After 48 hours, nonadherent cells were removed by replacing the medium. Then, the medium was replaced every 3 days. When the cells reached 80-90% confluence, they were trypsinized, counted, and reseeded as the first passage. Cells from passages 3-6 were used for subsequent experiments.
6. RNA extraction and quantitative real-time RT-PCR
Total RNA was extracted using Trizol reagent (Takara, Japan) according to the manufacturer’s instructions. Then, 1 µg of total RNA was reverse-transcribed using PrimeScript RT Master Mix kit (Takara, Japan) for reverse transcription, and used the reverse transcription product for amplification. For miRNA detection, RNA samples were purified and reversed transcribed using the TaqMan microRNA reverse transcription kit (Applied Biosystems, USA). Quantitative PCR was performed using EvaGreeen miRNA qPCR MaterMix (abm, Canada) and SYBR Premix Ex Taq II (TaKaRa, Japan). U6 and β-actin served as the internal control to quantify the relative expression of miRNA and mRNA. We quantified the results by using the 2-ΔΔCT method. The specific primers are listed in Supplementary Table 2.
7. Cell transfection, lentivirus infection, and plasmids constructs
The GV272-SIRT1-3ʹ-UTR-WT plasmid, which contains the putative miR-601-binding sites, and the GV272-SIRT1- 3ʹ-UTR-MUT plasmid, whose putative miR-601-binding sites were mutated, were acquired from Genechem (Shanghai, China). All constructs were confirmed by DNA sequencing. The miR-601 mimics/inhibitor and the negative control (nc) were purchased from GenePharma (Shanghai, China). SIRT1 siRNA was synthesized from Tsingke (Beijing, China). To overexpress SIRT1, pCDNA3.1-FLAG-SIRT1 plasmid and control vector plasmid were obtained from Tsingke (Beijing, China). The relevant sequences were provided in Supplementary Table 2. Lipofectamine 2000 (Invitrogen, Grand Island, NY, USA) was used for transfection following the manufacturer’s instructions.
8. Western blotting (WB).
Protein was extracted from the indicated cells using RIPA lysis buffer (Beyotime, Shanghai, China) supplemented with protease inhibitors PMSF (Beyotime, Shanghai, China). The protein concentration was measured using bicinchoninic acid (BCA) protein assay kit (Beyotime, Shanghai, China). Equal amounts of each sample were separated by SDS–polyacrylamide gels and immunoblotted with appropriate antibodies. The primary antibody was used and incubated at 4 °C overnight. The membranes were then incubated with the peroxidase conjugated secondary antibody (Bioworld, 1:10000) for 1 hour at room temperature. The proteins were visualized by an enhanced chemiluminescence assay (Millipore Corporation). The primary antibodies used in WB are listed in Supplementary Table 3. Each experiment was repeated three times,*P < 0.05 was considered to be statistically significant.
9. Alizarin red staining (ARS).
After osteogenic induction for 21 days, cells were fixed by 4% paraformaldehyde for 15 minutes, then stained with a 2% alizarin red S solution (Solarbio, Beijing, China) for 10 minutes. These cells were visualized using photography.
10. Oil Red O staining (ORO) and quantification.
After adipogenic induction for 21 days, cells were fixed by 4% paraformaldehyde for 15 minutes, then stained with 0.5% Oil Red O Saturated Solution (Cyagen, USA) for 10 minutes. These cells were visualized under a light microscope. After elution with 100% isopropanol, the absorbance of the eluate at 510 nm was determined by a microplate reader for quantification.
11. SA-β-Gal staining
After the intervention, cells were fixed by SA-β-Gal staining fixative for 15 minutes. An appropriate amount of staining solution (Beyotime, Shanghai, China) was prepared and added to the wells of the plate after washing with PBS. The plate was then placed in a 37 ℃ incubator (a CO2 incubator was not used) for 24 hours. Finally, cells were visualized under a light microscope.
12. Hematoxylin and eosin (H&E) staining
The femoral heads were fixed in 4% formaldehyde for 72 hours and decalcified with EDTA decalcification solution for 1 month. After rinsing overnight with running water, the decalcified specimens were dehydrated with different concentrations of ethanol gradient, hyalinized with xylene and embedded with paraffin. 5 μm thick sections along the coronal planes of femoral heads were made using a paraffin slicer. The sections were stained with hematoxylin-eosin and visualized by microscopy (Olympus).
13. Luciferase reporter assay
Cells cultured in 24-well plates were co-transfected with 1 μg of wide-type or mutated SIRT1 3ʹUTR constructs and nc or miR-601 mimics using Lipofectamine 2000 (Invitrogen, Grand Island, NY, USA) according to the manufacturer’s instructions. Luciferase activity was measured 48 hours after transfection using the Dual-Glo Luciferase Assay System (Promega, Madison, WI, USA), according to the manufacturer’s instructions. Firefly luciferase activity was normalized to Renilla luciferase activity for each sample. Each experiment was repeated three times.
14. Immunohistochemistry (IHC) staining
The sections were dewaxed with xylene and hydrated with gradient ethanol. Then the slides were incubated with hydrogen peroxide to block endogenous peroxidase activity, and the nonspecific binding sites were blocked with goat serum. Then, an appropriate volume of primary antibody was added and placed at 4 °C overnight. On the second day, the samples were incubated with the secondary antibody and the tertiary antibody at room temperature for 30 minutes, stained with diaminobenzidine, and counterstained with hematoxylin. Then, the immunohistochemically stained images were taken under an upright microscope.
15. Statistical analysis
Data analysis was performed using GraphPad Prism 8 software and SPSS 20.0 statistical software. Data are presented as the mean ± standard deviation (SD) of at least three independent experiments. Student’s t-test and one-way analysis of variance (ANOVA) followed by Dunnett's post hoc test were used to evaluate the significance of two groups and multiple groups, respectively. *P < 0.05 was considered to be statistically significant.
16. Study approval
All experimental procedures involving animals met the relevant guidelines for the humane care of laboratory animals and were approved by the First Affiliated Hospital of Chongqing Medical University and the Ethical Committee of Chongqing Medical University. For human studies, written informed consent was obtained from each donor with the permission of the Institutional Review Board of the First Affiliated Hospital of Chongqing Medical University and approval from the First Affiliated Hospital of Chongqing Medical University and the Ethical Committee of Chongqing Medical University.