1. Extraction of test materials and phytochemical analysis: The percent yield of hydro alcoholic extract of WS, TC, and AR were found to be 10%, 6.6%, and 30% respectively. The percent yield of water extract of WS, TC, and ARwere 12%, 07% and 20% respectively.
Total of 31 phytoconstituents were identified from these plant extracts using HPLC and LCMS. The AR extract showed the presence of Asparagamine A, Asparanin A, Isoagatharesinol, Muzanzagenin, Rutin, Shatavarin-I,Shatavarin-IV, Shatavarin-IX, Shatavarin-VI, Shatavarin-VII, and Shatavarin-X. The TC extract showed the presence of 20-Hydroxy Ecdysone, Berberine, Columbamine, Columbin, Magnoflorine, Menisperine, Syringin, Tinocordiside, Tinosporaside and Tinosporide. WS extract showed the presence of 12-Deoxywithastramonolide, 27-Hydroxywithanone, Ashwagandhanolide, Withacoagin, Withaferin, Withanolide-A, Withanolide-B, Withanone, Withanoside-IV, Withanoside-V. The structures of 31 phytoconstituents are given in Supplementary (S1) Table.These phytoconstituents were used for the further studies
2. Molecular Docking: To identify if any of the 31 phytoconstituents might possess therapeutic potential against SARS-CoV–2, they were docked to three important drug targets of the virus, the Spike protein, the Main Protease and the RNA dependent RNA polymerase. Molecular docking was performed using the protocol as described in the methods section.
2.1 Several phytoconstituents are predicted to possess good affinity for the Main Protease (Mpro): Therewere84crystal structures of the Main Protease (Mpro) in the PDB at the time of writing this manuscript. The largest share of the deposition is a series of Mpro crystal structures obtained by fragment screening (Fearon, D., Unpublished). This indicates that the binding site of Mprois druggable. The Mprois known to be functional as ahomodimer and has a heart-like shape. The protein has one active site per monomer. The active site contains the catalytic cysteine-Cys145, thatperforms the proteolysis reaction. The structure, PDB ID: 5R84, solved at a resolution of 1.83Å was chosen for this study. In this structure, the protease is co-crystallized with the fragmentcyclohexyl-N-(3-pyridyl) acetamide (Z31792168) which is seen to bind in theS1-S3pocket of the protease (Figure 1a). The S1 pocket is characterized with the presence of His163, Glu166, S2 with Cys 145 and S3 is known as the aromatic wheel and includes Phe181 and His41. Thus, in our studies weplaced the docking grid over the S1-S3 pocket. Initially, the co-crystallized ligand was separated and docked to check if Autodock was able to reproduce the binding mode. The docked pose showed an RMSD of 0.46 Å with thecrystal structure pose and adocking score of –6.2 kcal/mol(Figure 1A and B). A detailed study of interactions revealed that the carbonyl group of Z31792168shows a H-bond with Glu166 in the S1 pocket. The cyclohexylmoiety of the ligand has hydrophobic interactions with Met165, His41, His164, Arg188 andGln189 residue in the S3 pocket. Thepyridine ring scaffold shows hydrophobic interactions with Phe140 and His163 in the S1 pocket. All these interactions are in line with the crystallographic pose.
Thereafter, 31 phytoconstituents were docked to the binding site. The results are compiled in Table 1.It is a frequent observation that compounds with a docking score better than –6 kcal/mol have a higher probability of being active in vitro and in vivoand hence use this score as a cutoff 24. In our study we observed that, 18 out of 31 phytoconstituents have a docking score better than –6 kcal/mol.The best docking score –9.9 kcal/mol was observed for Ashwagandhanolide. Many other phytoconstituents like Withacoagin, Withaferin and Withanoneare observed to have docking scores close to the –9 kcal/mol. However, a point to be noted is that some of these phytoconstituents are large molecules and hence the docking scores may appear to be inflated due to size and the proportionately larger number of interactions. Ligand efficiency is a measure of the activity corrected for the ligand size25. A calculation of the ligand efficiency indicates that the co-crystallized ligand, Z31792168, has a ligand efficiency of –0.4. Among the phytoconstituents, the highest ligand efficiency, –0.3, is observed forColumbin. Several other phytoconstituents have comparative ligand efficiency namely, Tinocordiside, MagnoflorineandIsoagatharesinol.Columbin and Tinocordisidenot only have docking scores close to –8 kcal/mol but also have high ligand efficiencies. Similarly, Withacoagin, Withaferin, Withanolide-A, B and Withanone have good docking scores and ligand efficiencies. Interestingly, all compounds also follow Lipinski Rules which helps to distinguish between drug like and non-drug like molecules. A detailed study of interactions of Mpro with Columbin(Figure 1 c and d) revealed that the ligand interacts with His163 in the S1 pocket, and several residues in the S2 and S3 pockets in a manner like Z31792168. The detailed interactions of Tinocordiside (Figure 1 E and F) reveal that the Hydoxymethyl group forms hydrogen bonds with Glu166 and the keto group forms hydrogen bond with His163 in the S1 pocket. The ligand forms three additional hydrogen bonds with Gln189, Thr190 andArg188. Additionally, hydrophobic interactions are observed with amino acids Phe140, Asn142, His164, Met165 and Pro186.
2.2 Several phytoconstituents are also predicted to possess good affinity for theRNA dependent RNA polymerase (RdRp):For the RdRp of SARS-CoV–2 the PDB ID: 6M71 was chosen for this study26. This is a cryoEM structure solved at a resolution of 2.9 Å. Residues 367 to 920 of the structure form the RdRp domain. The authors report that a structural comparison of theSARS-CoV–2RdRp with that of Poliovirus (PDB ID: 3OL6) and HCV indicates that the polymerase domain adopts a conserved structural architecture. The residues Arg553, Lys545 and Arg555 form the NTP entry channel while residues Asp760 and Asp761 coordinate divalent cations that stabilize the phosphate group (the cations are absent from PDB ID: 6M71 as it is an apo structure). We placed our grid over the entire RNA binding site based on the structure of Poliovirus RdRp that is co-crystallised with RNA.
Remdesivir is an ATP analog and is being evaluated as a potential treatment for SARS-CoV–2 as an inhibitor of RdRp based on results obtained for MERS and SARS-CoV27.
Remdesivir is a prodrug whose active metabolite is GS–441524 (PubChem CID: 44468216). GS–441524 was docked to the RNA binding site. The docked results (Figure 2 a and b) indicate that the active metabolite forms hydrogen bonds with Asp760 which is an important active site residue and with Lys621 and Tyr619.The position of the active metabolite is that of the NTP entry channel. The docking score for the metabolite is –4.28 and the ligand efficiency is –0.2. Next, 31 phytoconstituents were docked to the binding site. The results are compiled in Table 1. Withanolide-B, Withacoagin, Withanone, Ashwagandhanolide and Muzanzagenin are predicted to possess docking scores ranging from ~ –9 to 10 kcal/mol. A total of twenty-one phytoconstituents have a docking score better than –6 kcal/mol. Calculation of ligand efficiency reveals that the top binders include Muzanzagenin, WithaolideB, Withacoagin and Magnoflorine. There are sixteen compounds with ligand efficiency better than the active metabolite. However, it is to be noted that the GS–441524 is a chain terminating nucleotide analog, while these compounds would be pure blockers. The detailed interactions of Muzanzagenin with RdRp (Figure 2 C and D) reveal two hydrogen bonds with the critical residues Asp760 and Asp761, and non-polar interactions over the NTP entry channel. The binding pose and interactions of Withanolide-B(Figure 2 E and F) also show interactions with the residues in NTP entry channel and the cation coordinating residues.
2.3 Phytoconstituents from WS are predicted to possess good affinity for theSpikeprotein:The entry of coronaviruses into cells is owing to the interaction between the clove shaped trimeric Spike viral protein with the human ACE2 receptors on the cell surface. Since this is the first and crucial point of contact between the viral protein with the human receptor this is a sought-after target for design of vaccine and therapeutics28. There are several structures of the SARS-CoV2 Spike protein with the human ACE2 protein. We chose the structure PDB ID: 6M17 for our docking studies29. This is a Single Particle cryoEM structure solved at a resolution of 2.9 Å. This structure represents the Receptor Binding Domain (RBD) of Spike protein with full length human ACE2. The Spike protein RBD interacts with the Peptidase Domain (PD) of the ACE2 in a 1:1 ratio. The interactions between the RBD and PD are mediated by residues Gln24, Lys417, Tyr453, Gln474, Phe486, Gln498, Thr500 and Asn501 of RBD. These residues are divided into three clusters, two clusters at each end and one in the center of the RBD. We placed the docking grid around all of these residues in an attempt to find molecules that could disrupt the contacts between RBD and PD.
The docking results with 31 phytoconstituents reveal that the compounds bind in various areas of the interface region of RBD. The top scoring compound is Ashwagandhanolide with a docking score of –10 kcal/mol. Ten phytoconstituents have a docking score better than –6 kcal/mol. Withacoagin, 27-Hydroxywithanone and Withanolide-B are predicted to have docking scores of –7.6, –7.6 and –7.4 kcal/mol respectively. The ranking based on ligand efficiency places Withacoaginat the top with a value of –0.23. Several compounds including Withanolide-B have a ligand efficiency of –0.22. Detailed analysis of the top docked pose of Withacoagin (Figure 3 A and B) indicates that it binds over middle and terimnal cluster of residues that interact with PD. The ligands form hydrogen bonds with Ser494, Tyr495 and Arg403 and vdW interactions with Phe497, Asn501, Gln493, Tyr453, Leu455 and Phe456.Withanolide-B only interacts with the terminal cluster of residues and shows hydrogen bonds with Thr500 and Asn501 and non-polar interactions with Tyr453, Ser494, Tyr495, Arg403, Tyr505, Gly496 and Gln498(Figure 3 C and D).
Table 1: Docking details of the phytoconstituents from AR, TC and WS to the main drug targetsof SARS-COV-2
Ligand
|
Heavy atoms
|
Main Protease
|
Spike Glycoprotein (RBD)
|
RNA dependent RNA polymerase
|
Docking Score
|
Ligand efficiency
|
Docking Score
|
Ligand efficiency
|
Docking Score
|
Ligand efficiency
|
Asparagamine A
|
28
|
-7.1
|
-0.25
|
-5.4
|
-0.19
|
-6.3
|
-0.22
|
Asparanin A
|
52
|
-6.3
|
-0.12
|
-5.8
|
-0.11
|
-7.5
|
-0.14
|
Isoagatharesinol
|
21
|
-5.8
|
-0.28
|
-4.6
|
-0.22
|
-5.0
|
-0.24
|
Muzanzagenin
|
32
|
-7.6
|
-0.24
|
-7.1
|
-0.22
|
-9.3
|
-0.29
|
Rutin
|
43
|
-5.3
|
-0.12
|
-3.3
|
-0.08
|
-3.6
|
-0.08
|
ShatavarinI
|
74
|
-1.1
|
-0.01
|
-1.7
|
-0.02
|
-3.3
|
-0.04
|
ShatavarinIV
|
62
|
-2.7
|
-0.04
|
-6
|
-0.1
|
-6.3
|
-0.10
|
ShatavarinIX
|
63
|
-0.6
|
-0.01
|
-5.4
|
-0.09
|
-6.7
|
-0.11
|
ShatavarinVI
|
62
|
-4.9
|
-0.08
|
-4.6
|
-0.07
|
-7.5
|
-0.12
|
ShatavarinVII
|
62
|
-6.6
|
-0.11
|
-5.7
|
-0.09
|
-6.3
|
-0.10
|
ShatavarinX
|
66
|
-0.4
|
-0.01
|
-4
|
-0.06
|
-5.2
|
-0.08
|
20-Hydroxy Ecdysone
|
34
|
-6.4
|
-0.19
|
-4.8
|
-0.14
|
-5.7
|
-0.17
|
Berberine
|
25
|
-6.3
|
-0.25
|
-5
|
-0.2
|
-5.7
|
-0.23
|
Columbamine
|
25
|
-5.9
|
-0.23
|
-4.6
|
-0.18
|
-5.4
|
-0.22
|
Columbin
|
26
|
-7.9
|
-0.30
|
-5.8
|
-0.22
|
-6.8
|
-0.26
|
Magnoflorine
|
25
|
-7.0
|
-0.28
|
-5.2
|
-0.21
|
-6.6
|
-0.27
|
Menisperine
|
26
|
-6.9
|
-0.27
|
-5.2
|
-0.2
|
-6.2
|
-0.24
|
Syringin
|
26
|
-5.3
|
-0.20
|
-3
|
-0.11
|
-4.2
|
-0.16
|
Tinocordiside
|
28
|
-8.1
|
-0.29
|
-5.1
|
-0.18
|
-6.6
|
-0.24
|
Tinosporaside
|
35
|
-7.9
|
-0.23
|
-5.7
|
-0.16
|
-6.6
|
-0.19
|
Tinosporide
|
27
|
-4.3
|
-0.16
|
-4.6
|
-0.17
|
-4.4
|
-0.16
|
12-Deoxywithastramonolide
|
34
|
-8.1
|
-0.24
|
-6.9
|
-0.2
|
-7.9
|
-0.23
|
27-Hydroxywithanone
|
35
|
-8.6
|
-0.25
|
-7.6
|
-0.22
|
-7.6
|
-0.22
|
Ashwagandhanolide
|
69
|
-9.9
|
-0.14
|
-10
|
-0.14
|
-10.2
|
-0.15
|
Withacoagin
|
33
|
-8.8
|
-0.27
|
-7.6
|
-0.23
|
-8.8
|
-0.27
|
Withaferin
|
34
|
-8.8
|
-0.26
|
-6.9
|
-0.2
|
-8.5
|
-0.25
|
WithanolideA
|
34
|
-8.5
|
-0.25
|
-6.7
|
-0.2
|
-8.2
|
-0.24
|
WithanolideB
|
33
|
-8.3
|
-0.25
|
-7.4
|
-0.22
|
-8.9
|
-0.27
|
Withanone
|
34
|
-8.8
|
-0.26
|
-7.1
|
-0.21
|
-8.9
|
-0.26
|
WithanosideIV
|
55
|
-5.6
|
-0.10
|
-4.6
|
-0.08
|
-5.8
|
-0.11
|
WithanosideV
|
54
|
-6.1
|
-0.11
|
-5.1
|
-0.1
|
-6.0
|
-0.11
|
3. Network pharmacological analysis of Rasayana Botanicals associated with immune pathways:Rasayana botanicals have immunomodulatory potential and help in rejuvenation of body homeodynamics30,31. To explore this, we have followed network pharmacology approach.
The constructed network represents total 19 bioactives from Rasayana botanicals associated with 306 unique human protein targets. Of these, 53 protein targets were found to be involved in 20 immune pathways referred as immune targets (Figure 4).The distribution of immune targets amongst Rasayana botanicals has been shown in Venn diagram (Figure 5b) AR, TC, and WS showed association with 18, 19, and, 20 immune pathways through involvement of 19, 25, and, 27 immune targets respectively (Figure 5c).The 7 common targets associated with all three Rasayanabotanicals are Bcl–2-like protein 1 (BCL2L1),, glycogen synthase kinase–3 beta (GSK3B),, Interleukin–2 (IL2),, prostaglandin G/H synthase 1 and 2 (PTGS1 and PTGS2),, prothrombin (F2),, and signal transducer and activator of transcription 3 (STAT3).. These immune targets are found to be involved in 11 different immune pathways including chemokine and specific receptor signaling (NOD-like, C-type lectin, BCR, and TCR), immune cell differentiation (Th1, Th2, and Th17), platelet activation and coagulation cascade, and intestinal IgA production.
The compiled data showed 137, 192, and 109 human protein targets of 9bioactives of AR, and 10 bioactives of TC, and WS each respectively. The immune pathway data retrieved 1104 unique protein targets from 20 different human immune pathways of KEGG database (data not showed). Further data analysis showed the association of AR, TC, and WS bioactives with all immune pathways through several protein targets (Figure5). The bioactives i.e. shatavarins of AR, tinosporides of TC, and withanolides of WS play crucial role in immunomodulation32,8,20.According to traditional medicine or Ayurveda principles, the synergistic effect of bioactive combination in an extract strengthens physiological immunity superior than a single molecule33. We analysed the data of bioactive-target association and mapped against immune pathways to explore the synergism principle by network pharmacology approach 34. The analysis showed involvement of AR in Th17 cell differentiation with 24 combinations of 8 bioactives and 6 targets. AR was also found to be involved in IL–17 signaling with 13 combinations of 9 bioactive and targets. Data analysis also showed association of TC with chemokine signalling with 13 combinations of 7bioactives and 5 targets. TC was found associated with few other pathways such as NOD-like receptor signaling, leukocyte trans-endothelial migration, and NK cell mediated cytotoxicity by moderate bioactive-target associations.
The analysis also retrieved multimodal involvement of WS in immunomodulation through various pathways. It is found to regulate chemokine signaling at a greater extent with maximum 66 combinatorial associations of 9 withanolides with 11 immune targets. This is followed by potential of WS in FC-gamma R-mediated phagocytosis and receptor signaling (NOD-like and c-type lectin) by 54, 55, and 46 bioactive-target associations. WS was also found to modulate T cell differentiation, NK cell cytotoxicity and signalling pathways of IL–17, TCR and BCR etc. The multidimensional correlation with immune pathways underlines the importance of WS in managing the immunopathology of COVID–19 by improving T cell, B cell and NK cell function and hence anti-viral immunity.
Predicting Herb-Drug Interactions:
Swiss-ADME, chemoinformatics platform was used to predict pharmacokinetics and drug likeliness potential of the 31 phytoconstituents. The Swiss-ADME pharmacokinetic data which also includes the effect of drug metabolising enzymes (CYPs) and transporters(Pgp) on the 31 phytoconstituentswas used to predict the herb-drug interactions if any. It showed that phytochemicals of AR except, Isoagatharesinolmay not inhibit any of the major CYP isoforms. Few TC phytochemicals may act as inhibitor of CYP1A2, CYP2D6 and CYP3A4 whereas few WS phytochemical may inhibit CYP2C9 (Table 2). Bioavailability RADAR analysis showed, 9 phytoconstituents of TC are orally bioavailable and lie within pink region of graph (supplementary S1 Appendix). Out of 11 phytochemicals of AR only Muzanzagenin and Asparagamine-A was found to be orally bioavailable. For WS, except Ashwagandhanolide, Withanoside V and Withanoside IV all other analyzed phytochemicals were found to be orally bioavailable. Muzanzagenin and Asparagamine A from AR, all analyzed phytochemicals of TC except 20-β-Hydroxy Ecdysone and Tinosporaside and all analyzed phytochemicals of WS except Ashwagandhanolide, Withanoside V and Withanoside-IVhavedrug-likeness properties. Except Syringin, AsparagamineA and Isoagatharesinolall the phytomolecules are the substrate of P-gp transporter. Muzanzagenin, Asparagamine A from AR and Columbamine, Berberine,Magnoflorine, Menisperine from TC showed ability to penetrate the blood brain barrier (BBB).Log Kp (Kp in cm/s) is skin permeation coefficient that assesses ability of test molecule to permeate through skin. Higher negative value indicates lesser skin permeability. This is directly correlated with molecular size and lipophilicity of compounds 35. Log Kp values shown by all analyzed phytochemicals indicate lower skin permeability. These properties need to be considered during phytopharmaceutical development. However, these predictions may not be the same for extracts as they contain multiple phytoconstituents.
COVID–19 pathogenesis mainly involves respiratory system and afterwards it leads to multiple organ failure based on patient related factors: sex, age, disease, individualization (PRF: SADI). As discussed earlier, diabetic, obese, asthamatic, geriatric, hypertensive population is more prone for COVID–1936. These associated comorbidities of COVID–19 are being continually treated along with anti-SARS-COV–2 therapy.Here, we propose the use of Rasayana botanicals for COVID–19 prophylaxis (both pre and post COVID–19) as well as anti-SARS COV–2 activity. This can lead to the chances of HDIs, which maybe harmful/beneficial/fatal37. Therefore, with the help of Swiss-ADME data (Table 2) and available published literature (Supplementary S2 Table)the probable pharmacokinetic HDI were explored. This showed that, whole plant extracts of these botanicals (especially those that are prepared according to the Ayurvedic procedure)do not inhibit main CYP isoforms such as, CYP1A2, CYP2C9, CYP2D6 and CYP3A4. Various extracts of AR, TC and WS have IC50 values >100 µg/mL for these CYP isoforms (Supplementary S2 Table).This indicatesthat athigher concentrations (generally more than therapeutic dose), these extracts may produce pharmacokinetic HDI in vivo38.Based on the above results, these phytoconstituents or Rasayana botanicals may produce beneficial pharmacokinetic-pharmacodynamic interactions in vivo, with the anti-viral and disease-modifying drugs that are currently being prescribed for COVID–19.
Table 2: In silico pharmacokinetic analysis of AR, TC, and WS phytochemicals
Herbs
|
Phytoconstituents
|
Predicted oral bioavailability§
|
Predicted Drug-likeness¥
|
Pharmacokinetics
|
CYP£
|
P-gp substrate
|
BBB permeability
|
GI absorption
|
Log Kp (cm/s)
|
Asparagus
racemosus
|
Muzanzagenin
|
Orally bioavailable
|
Y
|
N
|
Y
|
Y
|
High
|
-6.94
|
Asparanin A
|
Not orally bioavailable because polarity, solubility and size axes lie outside pink region
|
N
|
N
|
Y
|
N
|
Low
|
-8.48
|
Asparagamine A
|
Orally bioavailable
|
Y
|
N
|
N
|
Y
|
High
|
-6.95
|
Isoagatharesinol
|
Not orally bioavailable because saturation parameter does not lie within pink area
|
Y
|
CYP2D6, CYP3A4 only
|
N
|
N
|
High
|
-6.43
|
Rutin
|
Not orally bioavailable because of higher molecular weight and polarity
|
N
|
N
|
Y
|
N
|
Low
|
-10.26
|
Shatavarin I
|
Not orally bioavailable because of higher polarity, molecular weight and flexibility
|
N
|
N
|
Y
|
N
|
Low
|
-13.47
|
Shatavarin IV
|
Not orally bioavailable because of higher molecular weight and polarity
|
N
|
N
|
Y
|
N
|
Low
|
-10.53
|
Shatavarin VI
|
Not orally bioavailable because of higher molecular weight and polarity
|
N
|
N
|
Y
|
N
|
Low
|
-10.53
|
Shatavarin VII
|
Not orally bioavailable because of higher molecular weight and polarity
|
N
|
N
|
Y
|
N
|
Low
|
-10.97
|
Shatavarin IX
|
Not orally bioavailable because of higher molecular weight and polarity
|
N
|
N
|
Y
|
N
|
Low
|
-10.99
|
Shatavarin X
|
Not orally bioavailable because of higher polarity, molecular weight and flexibility
|
N
|
N
|
Y
|
N
|
Low
|
-11.23
|
Tinospora cordifolia
|
Berberine
|
Orally bioavailable
|
Y
|
CYP1A2, CYP2D6, CYP3A4 only
|
Y
|
Y
|
High
|
-5.78
|
Columbamine
|
Orally bioavailable
|
Y
|
Y
|
Y
|
High
|
-5.94
|
Menisperine
|
Orally bioavailable
|
Y
|
Y
|
Y
|
High
|
-6.30
|
Magnoflorine
|
Orally bioavailable
|
Y
|
CYP1A2, CYP3A4 only
|
Y
|
Y
|
High
|
-6.44
|
Tinopsoraside
|
Not orally bioavailable because of higher molecular weight and polarity
|
N
|
N
|
Y
|
N
|
Low
|
-9.13
|
Tinosporide
|
Orally bioavailable
|
Y
|
CYP2D6 only
|
Y
|
N
|
High
|
-7.64
|
Tinocordiside
|
Orally bioavailable
|
Y
|
N
|
Y
|
N
|
High
|
-8.56
|
Syringin
|
Orally bioavailable
|
Y
|
N
|
N
|
N
|
Low
|
-9.50
|
Columbin
|
Orally bioavailable
|
Y
|
N
|
Y
|
N
|
High
|
-6.95
|
20-β-Hydroxy Ecdysone
|
Orally bioavailable
|
N
|
N
|
Y
|
N
|
High
|
-8.91
|
Withania somnifera
|
Withacoagin
|
Orally bioavailable
|
Y
|
CYP2C9 only
|
Y
|
N
|
High
|
-6.29
|
Withanolide B
|
Orally bioavailable
|
Y
|
Y
|
N
|
High
|
-5.76
|
Withastramonolide-12-Deoxy
|
Orally bioavailable
|
Y
|
Y
|
N
|
High
|
-6.35
|
Withanoside IV
|
Not orally bioavailable because of higher molecular weight and polarity
|
N
|
N
|
Y
|
N
|
Low
|
-10.37
|
Withanolide A
|
Orally bioavailable
|
Y
|
N
|
Y
|
N
|
High
|
-6.86
|
Withanone
|
Orally bioavailable
|
Y
|
N
|
Y
|
N
|
High
|
-7.01
|
Withaferin A
|
Orally bioavailable
|
Y
|
N
|
Y
|
N
|
High
|
-6.45
|
27-hydroxy Withanone
|
Orally bioavailable
|
Y
|
N
|
Y
|
N
|
High
|
-7.60
|
Withanoside V
|
Not orally bioavailable because of higher molecular weight and polarity
|
N
|
N
|
Y
|
N
|
Low
|
-9.79
|
Ashwagandhanolide
|
Not orally bioavailable as four axes namely of lipophilicity, size, polarity and solubility lies outside pink area
|
N
|
N
|
Y
|
N
|
Low
|
-6.95
|
Note: § Predicted oral bioavailability from RADAR graph (Supplementary file: S1 Appendix)
£ Predicted CYP Inhibitionfor CYP1A2, CYP2C9, CYP2C19, CYP2D6and CYP3A4
¥Predicted Drug-likeness (Results of Lipinski, Ghose, Veber, Egan and Muegge rules)