Mice
All animal experiments were approved by The Walter and Eliza Hall Institute of Medical Research (WEHI) Animal Ethics Committee. The generation of A1–/– mice has been described previously 10. All mouse strains have been generated on and were maintained on a C57BL/6 background and equal proportions of 7 to 8 week-old males and females were used in all experiments. The mice were transported and housed short term under specific pathogen-free conditions at the La Trobe Animal Research and Training Facility (LARTF) for PA and CS experiments.
Intranasal injection of LPS
Mice were slightly anaesthetized with Methoxyflurane. Anaesthetized mice received intranasal instillation of 10 µg of LPS or an equivalent volume of PBS. Control mice only received PBS. The mice were placed under a heat lamp or on a heat pad and monitored until fully conscious.
Intranasal administration of Pseudomonas aeruginosa
Pseudomonas aeruginosa ATC27853 strain was grown overnight in 5 mL of LB broth. The bacteria were spun down and resuspended in PBS to obtain an OD600 of 0.7. Mice were anaesthetized (similarly to the intranasal LPS experiments) and administered with 40 μL of the solution containing of PA (∼1.5 × 107 CFU) or 40 μL of PBS.
Induction of acute polymicrobial sepsis
The CS injection method was used to induce polymicrobial sepsis . In brief, 50 naive wild-type adult C57BL/6 mice were euthanized and 10 g of ceacal content was harvested. The caecal content was resuspended in 5% dextrose to obtain a CS stock of 250 mg/mL, which was then filtered through a 100 µm filter. This stock was aliquoted and stored and used for all CS experiments to prevent batch variations. Mice were injected with 0.1 mg/kg Buprenorphine 30 min before CS injection. Mice were i.p. injected with CS and monitored every 3 h up to first 72 h and then twice a day up to 2 weeks. Mice were euthanized if signs of distress were observed.
Induction of inflammation by non-microbial components
For the gout model, 2 mg of MSU crystals dissolved in PBS were i.p. injected into mice and peritoneal lavage obtained 16 h post-injection for Western blotting. For the acute asthma model, a suspension containing 20 ug ovalbumin (OVA) and 2.25 mg aluminium hydroxide was injected i.p. into mice on day 1 and 14 and mice were aerosol challenged either with PBS or OVA for 15 min per day on days 21, 22 and 23. 24 h after the last exposure, mice were euthanized and organs harvested.
Harvesting of cells from mice
Mice were euthanized by CO2 asphyxiation. For bone marrow retrieval, the fermur was flushed with 1 mL of PBS buffer. Cells were passed through a 100 μm cell strainer to obtain a single-cell suspension. For blood cell analysis, bleeds were taken from mice immediately following euthanasia into Microvette tubes containing anti-coagulants. For obtaining cells from the peritoneal cavity, mice were i.p. injected with 5 mL of cold PBS immediately following CO2 asphyxiation and gently massaged. The lavage containing the cells was drawn back into the syringe and the cells recovered by centrifugation. Peritoneal cells were subjected to flow cytometry and the lavage fluid was used to measure cytokine levels by ELISA according to the manufacturer’s instructions (eBioscience).
Lung tissues were minced, and tissue dissociation was carried out by enzymatic digestion (in medium containing 0.2 g/L glucose and 20 mg/mL Worthington Collagenase Type 1) as previously described 40. All processed cell pellets requiring red blood cell lysis were resuspended in lysis buffer (0.156 M NH4Cl) and left at 25 °C for 5 min. The supernatant was removed, and the cells were resuspended in FACS buffer (PBS with 2% fetal calf serum) and stained with appropriate antibodies.
Neutrophil isolation
Neutrophils were isolated from the pellet of cells resulting from the processed lungs by using the Stem Cell Technologies’ Mouse Neutrophil Enrichment Kit according to the manufacturer’s instructions.
p. aeruginosa colony formation assay
The left lobe of the lung was dissected and homogenized in 1 mL of PBS. 20 µL of the suspension was dropped on a LB agar plate as the undiluted sample. Subsequent dilutions were carried out in PBS and 20 µL from each of these dilutions was also dropped on the LB agar plates. Plates were incubated overnight at 37 °C and the number of visible bacterial colonies counted the following day.
Western blotting
Total protein extracts were prepared by lysing cells in lysis buffer (20 mM Tris-pH 7.4, 135 mM NaCl, 1.5 mM MgCl2, 1 mM EGTA, 10% (v/v) glycerol and 1% (v/v) Triton-X-100; Sigma-Aldrich) with complete protease inhibitor cocktail (Roche) for 1 h at 4 °C. Equal amounts of proteins were electrophoresed on NuPAGE 4–12% Bis Tris gels (Invitrogen) before transferring to nitrocellulose membranes (Life Technologies) and probing with primary antibodies: monoclonal rat anti-mouse A1 (clone 6D6, WEHI antibody facility, monoclonal-mouse anti-HSP70 (clone N6, W. Welch USCF). Secondary anti-rat/anti-mouse IgG antibodies conjugated to HRP (Southern BioTech, Birmingham, AL, USA) were applied, followed by Luminata Forte Western HRP substrate (Millipore, Billerica, MA, USA) for band visualisation. Membranes were imaged using the ChemiDoc XRS+ machine with ImageLab software (Bio-Rad).
Statistical analysis
Data are presented as the mean ± s.e.m. Paired two-tailed student’s t-test and P values were used to determine statistical significance. P values < 0.05 were considered as statistically significant, and P values > 0.05 were considered non-significant. For mouse survival data analysis, the significance was calculated using the log-rank test (Prism Software, Graphpad).
Haematopoietic cell analysis and flow cytometry
Peripheral blood was analysed with the ADVIA automated haematology system (Bayer). Lung, bone marrow and peritoneal lavage cell populations were examined using flow cytometry. Cell populations were identified by staining with fluorochrome-conjugated monoclonal antibodies (produced in-house, BD Biosciences or BioLegend) that detect cell subset specific surface markers: B220 (BV605), TCRb (PE-Cy7), MAC-1 (FITC), GR-1 (APC) and Ly5.2 (PE). Dead cells were excluded from analysis by staining with propidium iodide (PI, 5 μg/mL). To determine the intracellular PA, cells were fixed and permeabalized using eBioscience intracellular fixation and permeabilisation buffer set and stained with Rabbit anti-Pseudomonas antibody (ab68538) followed by a FITC-conjugated anti-rabbit IgG secondary antibody. Flow cytometry was performed on the LSR II flow cytometer (BD Biosciences) and data were analysed using FlowJo software (FlowJo LLC).