Cell culture
Bone marrow-derived human MSCs (male, age 38) were purchased from Lonza (Walkersville, MD, USA) and expanded as previously reported19. Passage 3 to 5 MSCs were trypsinized and employed in all experiments. All cell culture experiments were carried out in humidified incubators at 37ºC with 5% CO2. The study design adopted is schematically shown in Figure 1.
Preparation and encapsulation of MSCs in 3D hydrogels
MSCs were encapsulated in alginate:collagen hydrogels at a seeding density of 2 x 105 cells per hydrogel and cultured for 21 days with and without IL1β (R&D systems, 201-IL) or cLIUS stimulation. Briefly, a 0.4% sterile collagen solution (Advanced BioMatrix, 5153) was mixed with neutralizing solution (Advanced BioMatrix, 5155) as per the manufacturer’s instructions. MSCs were added to the neutralized collagen solution at a ratio of 5:1 and mixed with 2% sterile alginate (Sigma, W201502) to yield a final concentration of 1.2% (alginate) and 0.11% (collagen). 100µl of the alginate-collagen-MSCs solution was pipetted into 5 x 5 mm agarose molds containing 0.5 M CaCl2 and incubated at 37ºC for 30 min. Formed hydrogels were removed and cultured in six-well tissue culture plates (TCPs) in α-MEM basal media supplemented with 10% fetal bovine serum, 1x GlutamaxTM and 1x Antibiotic- AntimyoticTM (Gibco, USA) solution for 72 hr.
MSCs culture in hydrogels and cLIUS treatment
Hydrogels were divided into four sample groups as: Group 1: cLIUS (-), IL1β (-); Group 2: cLIUS (+), IL1β (-); Group 3: IL1β (+), cLIUS (-) and Group 4: IL1β (+) cLIUS (+), and schematically depicted in Figure 1. Media was replaced every 3 days, where only half of the media was supplemented with fresh media containing 10 ng/ml of IL1β. Automated cLIUS stimulation was applied using the bioreactor developed at the University of Alabama in Huntsville (UAH) at the following regimen: 14 kPa (5.0 MHz, 2.5 Vpp), 10 min/application, and four applications/day. Hydrogels were retrieved at the end of 21 days and subjected to outcome analysis as listed in Figure 1.
MSCs culture in monolayer and cLIUS treatment
MSCs were plated in 6-well or 12-well TCP at the following seeding densities: 2 x 105 or 5 x 104 cells/well (protein and RNA extractions following treatment with cytokines and non-treated controls) and 1 x 104 cells/coverslip (CS) (for TMRM assay and IF studies following treatment with cytokines and non-treated controls). All treatments with cytokines and/or cLIUS were conducted after 48 hr of initial seeding of MSCs in TCP or CS. All cytokines were purchased from R&D systems (Minneapolis, MN) and were employed at a concentration of 10 ng/ml. Non-focused immersion transducers (Panametrics V300, 12.7 mm diameters, Panametrix, Waltham, MA, USA) were used to apply cLIUS to plated MSCs using procedure detailed elsewhere21. MSCs were exposed to cytokines and cLIUS was applied one time for 10 or 20 min at 5 MHz (2.5 Vpp) with constant pressure amplitude of 14 kPa. In addition to qRT-PCR following cLIUS stimulation, WB, TMRM assay and IF staining were conducted.
Cell viability assay
Cell viability in hydrogels was assessed by Live/DeadTM Viability/Cytotoxicity kit (Molecular Probes, USA) according to manufacturer’s instructions21 and visualized with the Zeiss LSM 700 Confocal Microscope. All the images were collected at 10x magnification (z step size = 12 μm).
Histology and Immunohistochemistry
Hydrogels were fixed using a protocol listed elsewhere23,24 and used for histological and immunohistochemical analysis (n=3) at the pathology core research laboratory, University of Alabama in Birmingham (UAB). 8 mm sections were stained using hematoxylin and eosin (H&E) and immunostained with 1:20 dilution of Collagen II (COLII) antibody (Abcam, 34712) with corresponding secondary antibody. A human bone section was included as a positive control.
Quantitative real-time PCR (qRT-PCR)
MSCs were released from hydrogels (n=10) using the dissolution buffer (DB) (55 mM sodium citrate, 50 mM EDTA, and 90 mM NaCl, pH 6.9) and homogenized with the Trizol reagent (Invitrogen, USA). In monolayer studies, cells from TCP plates were homogenized with 300µl of Trizol reagent per well. Homogenates from two wells served as one replicate, and three such replicates were used for gene expression analysis (n = 3). RNA was extracted using PureLink RNA Mini Kit (Thermofisher, USA). The qRT-PCR analysis was carried out using QuantStudio 3 real-time PCR system (Applied Biosystems, USA) employing TaqMan® RNA-to-CT™ 1-Step Kit (Life Technologies, USA).
TaqMan® Gene expression assays (Life Technologies, USA) used are as follows:
GAPDH (Hs02786624_g1), MMP13 (Hs00942584_m1), ADAMTS4 (Hs00192708_m1), NFκB (Hs00765730_m1), TIMP1 (Hs01092512_g1), SOX9 (Hs00165814_m1), RUNX2 (Hs01047973_m1), PPARG (Hs01115513_m1) and MTCO3 (Hs02596866_g1), MTCYB (Hs02596867_s1). The expression of mRNA transcripts was normalized to GAPDH expression and relative expression levels were calculated using the 2-ΔΔCt method.
Immunofluorescence staining
MSCs on CS were fixed in 4% paraformaldehyde (4% PFA) for 20 min and blocked with 2% goat serum in 1X TBST (Tris buffer saline with 0.1% tween20) blocking buffer (BB) for 2 hr. CS were then incubated with 1:1000th diluted rabbit anti-phospho-NFκB p65 monoclonal antibody (Invitrogen, MA5-15160) in BB overnight at 4ºC. Upon washing, CS were incubated with 1:1000th diluted goat anti-rabbit IgG H&L conjugated with Alexa flour 488 (Abcam, 150077) for 1 hr at room temperature (RT) and mounted on a glass slide with DAPI mounting media (ProLong™ Diamond Antifade Mountant with DAPI, P36962). For CS subjected to double IF staining, CS treated as above till the NFκB detection step and then washed and blocked with BB for 1 hr at RT and incubated with 1:1000th diluted rabbit anti-human SOX9 Mab (CST, 82630) overnight at 4oC. Upon washing, CS were incubated with 1:1000th diluted goat anti rabbit IgG H&L conjugated with Alexa flour 594 (CST, 8889S), for 1 hr at RT and mounted as mentioned earlier. All images were captured using the Zeiss LSM 700 confocal microscope at 63x magnification. Fluorescent intensities were quantified using ImageJTM software (n=30-60).
To visualize pNFκB and COLII in hydrogels, a modified IF staining protocol was adopted25 where hydrogels were washed in HBSSCM (HBSS containing 1.26 mM CaCl2 and 0.4 mM MgSO4) and fixed with 4% PFA containing 1.26 mM CaCl2, 400 mM MgSO4 for 60 min. After copious washing, samples were permeabilized with 0.1% Triton X-100 in HBSSCM and blocked with BB (5% BSA, 10% goat serum in HBSSCM containing 0.2% tween) for 2 hr at RT. pNFκB and COLII were independently stained and detected as mentioned earlier. COLII was detected using 1:1000th diluted rabbit anti-human collagen II polyclonal antibody (Abcam, 34712) and Alexa flour 488 conjugated goat anti rabbit polyclonal antibody. All images were collected at 63x magnification using the Zeiss LSM 700 confocal microscope (z stacks: 180-190µm and z step size: 5µm), and fluorescent intensity was quantified using ImageJTM software (n=15).
Protein isolation and Western Blotting
Total protein was extracted and quantified upon cessation of cLIUS stimulation using previously published methods22. Lysates from three independent wells were pooled together for total protein extraction (n=6). SDS-PAGE was conducted using NovexTM Tris-Glycine gels (Invitrogen, USA) per the manufacturer’s instructions. Proteins separated by SDS-PAGE were transferred to the PVDF membrane. Membranes were blocked with 5% dry milk (CST,9999) for 1 hr at RT and incubated with 1:1000th diluted primary antibodies of pNFκB (CST, 3033), tNFκB (CST, 8242), pIκBα (CST, 2859), and tIκBα (CST, 4814) in 5% BSA overnight at 4oC. Detection was performed by incubating with 1:2000th diluted horse-radish-peroxidase (HRP) labeled secondary antibodies to rabbit IgG (CST, 7074) and mouse IgG (CST, 7076), β-actin was used as a loading control. The cytoplasmic and nuclear fractions were isolated using NE-PER™ kit (Thermo Scientific, USA) and processed for western blotting as described.
To quantify COLII expression levels in hydrogels (n=6), MSCs were released using DB and total protein was extracted and quantified as detailed elsewhere22. Proteins were separated, transferred and blocked and membranes were incubated with 1:1000th diluted COLII antibody (Abcam, 34712) overnight at 4oC. Membranes were washed and incubated with HRP labeled secondary antibody rabbit IgG for 2 hr at RT and β-actin was used as a loading control. All blots were visualized by incubating with Clarity™ western ECL kit (Bio-Rad, USA) as per the manufacturer’s instructions. Images were captured with a ChemiDoc MP imaging system (Bio-Rad, USA), and the band intensities were quantified using ImageJ™ software.
Measurement of Mitochondrial Potential using TMRM assay
Mitochondrial potential(ΔYm) in various study groups (Figure 1) was assessed using the TMRM assay as per manufacturer’s instructions. Briefly, cells on CS were washed and incubated with 100nM TMRM reagent for 30 min. Live images were captured using Zeiss LSM 700 confocal microscope at 10x magnification, and fluorescent intensity was quantified using ImageJTM software (n=50).
Statistical Analysis
The data are expressed as average ± standard deviation. For qRT-PCR, monolayer IF, and mitochondrial potential data analyses, one-way ANOVA followed by post-hoc Sidak’s multiple comparison test was used. One-way ANOVA with post-hoc Dunnett’s multiple comparison test was used to analyze data collected from western blot and hydrogel IF. The graphs were generated using GraphPad Prism software. Statistical significance was established as follows: p<0.05 (denoted as *), p<0.01 (denoted as **), p<0.001 (denoted as ***), p<0.0001 (denoted as ****).