Antibodies
Information on all commercial primary and secondary antibodies is included in Supplementary Table 1.1 and 1.2 respectively.
Rabbit anti-CXCL10 was produced against CLNPESKTIKNL by ZoonBio BioTech (Nanjing, China) and purified by affinity purification.
Mice Model
All experimental procedures involving animals were approved by the Institutional Animal Care and Use Committee (IACUC) of Nanjing Medical University (Approval No., IACUC-2205056) and Anhui Medical University (Approval No., LLSC-20232253). All mice were housed under standard specific pathogen-free (SPF) conditions of the animal core facility (ACF). To acquire the ovaries and other tissues, mice were anesthetized with CO2 and then sacrificed by cervical dislocation. Three mouse models were created as follows.
1). WCV and PD-1 monoclonal antibody immunotherapy in B6 mice
Immunotherapy mouse modeling was established as published (18). Four groups were set up: the CTR group, the M (MCA205) group, the VM (WCV + MCA205) group, and the PM (anti-PD-1 antibody + MCA205) group.
For CTR group, female C57BL/6 mice aged 7–8 weeks was injected with 100 µL PBS s.c. (subcutaneous) once daily. For M group, female C57BL/6 mice aged 7–8 weeks received subcutaneous injections of 1 × 106 MCA205 cells, a malignant cell line from mouse fibrosarcoma. Tumor diameters were measured with digital calipers at multiple time points (days 3, 5, 7, 9, and 11), and the tumor area (in mm2) was calculated with the following formula: Area = 3.14 × Width × Length/4. For VM group, on day − 12, tumor cells were pre-treated with 2 µM MTA (mitoxantrone) for 16 h (Whole cancer cell vaccine, WCV), washed with PBS, and injected s.c. (1 × 106 WCV cells in 100 µL PBS) into naive C57BL/6 mice, then on day 0, tumor cells were injected as in M group. For PM group, on day 0, tumor cells were injected as in M group, then on day 5 (When tumor size reached 25–45 mm2), 8, 11 respectively (3 injections totally for one time of modeling), mice were injected i.v. (intravascularly) with 10 mg/Kg anti-PD-1 mAb (in 100 µL PBS, clone RMP1-14, BioXCell, New Hampshire, USA).
2). CXCL10 antibody injection in tumor-bearing mice
For this, three groups were set up: the CTR group, the M (MCA205) group, and the CM (anti-CXCL10 antibody + MCA205) group.
For CTR or M group, the treatment was as above. For CM group, on day 0, tumor cells were injected as above; then on day 5 (When tumor size reached 25–45 mm2), 8, 11 respectively (3 injections totally for one time of modeling), mice were injected i.v. (intravascularly) with 10 mg/Kg anti-CXCL10 antibody (in 100 µL PBS).
3). Competitive peptide injection in tumor-bearing mice
For this, three groups were set up: the CTR group, the M (MCA205) group, and the CI-M (CIBB + MCA205) group.
For CTR group, the treatment was as above. For M group, tumor cells were injected as above, plus 6 mg/Kg control CPP (cell-penetrating peptide) TAT (trans-acting activator of transcription of HIV, CYGRKKRRQRRR) injection daily (in 100 µL PBS). For CI-M group, on day 0, tumor cells were injected as above; then from the next day, mice were injected i.p. (intraperitoneally) with 6 mg/Kg CIBB peptide daily (in 100 µL PBS).
For CIBB design that inhibits the interaction between CXCL10 and IL18R1, the protein structure of CXCL10 interacting with IL18R1 was predicted by AlphaFold. The sequences in CXCL10 that bound to IL18R1 in the top two prediction models were the M1 sequence (CLNPESKTI) and the M2 sequence (IGKLEIIPASLSCPRVEIIATMK). The Flag sequence (DYKDDDDK) and TAT sequence were fused with the M1 or M2 sequence and synthesized by Shanghai Bootech Bioscience & Technology (Shanghai, China). The combination of M1 and M2 was named CIBB (CXCL10-IL18R1 Binding Blocker), which was dissolved in 10% DMSO (dimethyl sulfoxide, Sigma, Saint Louis, USA) to a stock concentration of 5 mg/mL. The stock peptide was diluted with PBS to a final concentration of 0.5 mg/mL, and the injection dosage was 6 mg/Kg.
RNA sequencing and analysis
RNA samples were obtained from the ovaries of the mice. The process involved isolating RNA, conducting high-throughput sequencing, and analyzing the data. This was performed by Seq Health Technology (Wuhan, China) following standard protocols. The library products were then sequenced on a DNBSEQ-T7 sequencer (MGI Tech, Shenzhen, China) with the PE150 model. The original sequence datasets were submitted to the NCBI Sequence Read Archive database and assigned an accession number. Specifically, for the RNA-seq in Fig. 3A, the accession number was GSE248829. Gene with an absolute value of the log2 (treated/control) ratio greater than or equal to 1.2 and a q-value of less than 0.001 was determined as a DEG (differentially expressed gene).
Multiplex immunoassay
Mutiplex immunoassay was operated by Shanghai Universal Biotech (Shanghai, China). Blood plasma was collected from the CTR group, the M group, the VM group, and the PM group (five repeats each group). 50 µL of the collected sample was utilized to measure cytokines using Luminex magnetic beads according to the Mouse LX-MultiDTM-31 protocol (Bio-RAD, Hercules, USA, Cat. No. 12009159). The information was gathered with a Bio-Plex 200 system (Bio-RAD) with high-throughput fluidics (HTF) and analyzed using Bio-Plex Manager software version 6.1 (Bio-RAD).
Tissue dissociation and single-cell suspension preparation
The ovarian tissues were preserved in the GEXSCOPE tissue preservation solution (Singleron Biotech, Nanjing, China) and shipped to the Singleron lab with ice pack. The specimens were washed 3 times with HBSS (Hanks Balanced Salt Solution, Gibco, Cat. No. 14025-076) and shred into 1–2 mm pieces. Then the tissue debris were submitted to the digestion with 2 mL GEXSCOPE tissue dissociation solution (Singleron) at 37°C for 15 min in 15 mL centrifuge tube with sustained agitation. Cells were filtered through 40-micron sterile strainers and centrifuged at 300 g for 5 min. Then the supernatant was removed, and the pellets were resuspended in 1 mL PBS. To remove the red blood cells, which were frequently a significant portion of the cells produced, 2 mL RBC lysis buffer (Roche, Indianapolis, USA, Cat. No. 11814389001) was added to the cell suspension according to the manufacturer’s protocol. Next, the cells were centrifuged at 500 × g for 5 min at 15–25°C and resuspend in PBS. The sample from the cell mixture was stained with trypan blue (Bio-RAD, Cat. No. 1450013), counted, and the cell density was adjusted to 1 × 105 cells/mL. Once the cell viability exceeded 80%, subsequent sample processing could be performed.
Single-cell RNA sequencing and data analysis
Single-cell suspensions with 1 × 105 cells/mL in PBS were prepared. Single-cell suspensions were then loaded onto microfluidic devices and scRNA-seq libraries were constructed according to Singleron GEXSCOPE protocol by GEXSCOPE Single-Cell RNA Library Kit (Singleron), which included cell disruption, mRNA trapping, cell labeling (with barcode) and mRNA labeling (with UMI), reverse transcription of mRNA into cDNA and amplification, cDNA fragmentation, and finally cDNA fragments cloning. Individual libraries were diluted to 4 nM and pooled for sequencing. Pools were sequenced on Novaseq 6000 (Illumina, San Diego, USA) with 150 bp paired end reads. Raw reads were processed with fastQC and fastp to remove low quality reads. Poly-A tails and adaptor sequences were removed by cutadapt. After quality control, reads were mapped to the reference genome GRCm38 (ensembl version 99 annotation) using STAR. Gene counts and UMI counts were acquired by featureCounts software. Expression matrix files for subsequent analyses were generated based on gene counts and UMI counts. We selected the genes expressed in more than 10% of the cells in either of the compared groups of cells and with an average log (Fold Change) value greater than 1 as DEGs. Adjusted p value was calculated by benjamini-hochberg correction and the value 0.05 was used as the criterion to evaluate the statistical significance.
Flow cytometric analysis
Six mouse ovaries were used for each sample. The freshly dissected ovaries were immediately placed into ice-cold PBS, then carefully dissected, and minced by scissors. Next, the ovaries were digested with 3 mL of digestion buffer containing RPMI-1640 medium, 4 mg Collagenase IV (Sigma, Saint Louis, USA, Cat No. AC5138), and 0.25 mg Deoxyribonuclease I (Sigma, Cat No. DN25) for 40 min on a shaker at 120 RPM and 37°C. Next, the digestion was stopped by 1 mL of PBS containing 20% FBS (fetal bovine serum).
The cell pellets were centrifuged 10 min at 600 g and 4°C, resuspended in FACS (Fluorescence-Activated Cell Sorting) buffer (PBS with 0.5% BSA (Bovine Serum Albumin) and 5 mM EDTA), and filtered through a 70 µm nylon mesh filter (Biosharp, Beijing, China, Cat No. BS-70-CS).
Cells were stained for live/dead viability using Zombie Violet™ Fixable Viability Kit (Biolegend, Beijing, China, Cat No. 423113) for 20 min, followed by incubation with anti-CD16/CD32 monoclonal antibody (Biolegend, Cat No. 156603) to block non-specific antibody staining. Cells were incubated with cell surface antigen-specific antibodies, such as CD45 antibody (Biolegend, Cat No. 103116), F4/80 antibody (Biolegend, Cat No. 123110), CD11b antibody (Biolegend, Cat No. 101206), and CD86 antibody (Biolegend, Cat No. 105014), on ice for 60 min. After washing, cells were retained approximately 100 µL residual volume, fixed with 100 µL IC fixation solution (Thermo Fisher, Waltham, USA, Cat No. 88-8824-00) for 60 min. Cells were washed twice with 2 mL permeabilization solution, then incubated with CD206 antibody (Biolegend, Cat No. 141712) for 60 min. Finally, cells were resuspended in 500 µL PBS and passed through a 70 µm nylon mesh filter for analysis on the Cytoflex LX cell analyzer (Beckman, Miami, USA) using CytExpert software.
After being gated, CD45+, F4/80 + and CD11b+, CD86+/CD206- cells were analyzed as M1 macrophage while CD86-/CD206 + cells were analyzed as M2 macrophage. The gating strategy is in supplementary Fig. 5.
Expression and purification of IL18R1 in SF9 cells
IL18R1 protein, fused with EGFP-Strep II, was cloned and expressed through a Bac-to-bac system (Themo Fisher). In short, the corresponding sequence (Supplementary Table 2) was cloned into pFastBacHTA (Supplementary table 4) and then transformed into DH10Bac (Vazyme, Nanjing, USA) competent E.coli. The bacmid was isolated from the E. coli using the QIAFILTER plasmid purification specimen (QIAGEN, Tegelen, Netherlands) and then transfected into Sf9 cells (Genetimes ExCell Technology, Shanghai, China, Cat. No. ATCC CRL-3357) with Cellfectin II Transfection reagent (Thermo Fisher) to produce first-round baculovirus. The fresh Sf9 cells were infected with the first-round baculovirus for 48 h for second- and third-round of virus amplification. Twenty µL of the third-round virus supernatant was used to infect 500 mL (SFM900-II medium, with 5% FBS, Thermo Fisher) Sf9 cells (1.5 x 106/mL) for protein expression in an orbital shaker (Shanghai Zhichu Instrument) at 27°C and 200 RPM. The infected cells were resuspended in a lysis buffer (containing 50 mM Tris, 10% sucrose, 50 µM ATP, 1 mM phenylmethylsulfonyl fluoride (PMSF), 5 mM dithiothreitol (DTT), 1% NP40, 10 mM imidazole, 1 × protease inhibitor and phosphatase inhibitor, pH 7.0 by HCl). Cell lysate was further lysed with high-pressure cell disrupter (Union Biotech, Shanghai, China) and centrifuged; the lysate supernatant was incubated with 1 mL Ni-NTA Superflow resin (QIAGEN) for 1 h at 4°C. The resin was then transferred into a 5 mL chromatography column (Biocomma, Shenzhen, China) and washed with four column-volume of wash buffer (40 mM imidazole, with PMSF free). Finally, the protein was eluted with resuspension buffer (500 mM imidazole, without PMSF). The eluted protein was concentrated by a size-exclusion spin column and exchanged into BRB80 buffer (80 mM HEPES, 1 mM MgCl2 and 1 mM EGTA, pH 6.8 by KOH) with 10% glycerol, 50 µM ATP and 5 mM DTT. The protein was aliquoted and kept at − 80 ˚C for future use. The conc. of IL18R1 was determined by comparing its intensity with 0.4 mg/mL BSA (Fig. 4C)
Expression and purification of CXCL10 in Ecoli, GST-pulldown, and mass spectrometry
The construct containing pGEX-6P1-CXCL10-StrepII was propagated in BL-21 E.coli (Vazyme, Cat. No. C504). 10 mL overnight culture was added into 1000 mL LB medium and the E.coli grew on an orbital shaker at 27°C and 200 RPM till the OD600 reached 0.6. Then the E.coli culture was induced with 0.1 mM IPTG (Isopropyl-β-d-thiogalactoside, Yeasen, Shanghai, China, Cat. No. 10902ES10) at 16°C for 16 h. Next, the E.coli culture were collected by centrifugation for 10 min at 3500 RPM and 4°C, washed with ice-cold PBS at pH 7.3, and lysed in 25 mL lysis buffer (PBS, pH 7.3, 1 mM DTT (Dithiothreitol, Amresco, Framingham, USA, Cat. No. M109), 1 mM phenylmethylsulfonylfluoride (PMSF, Amresco, Cat. No. M145), 1:100 InStab™ protease inhibitor cocktail (Yeasen, Cat. No. 20124ES10), 1:100 InStab™ phosphatase inhibitor cocktail (Yeasen, Cat. No. 20109ES20), 1% Triton X-100). After standing on ice for 15 min, the E.coli were broken by a high-pressure crusher, and the supernatant was collected by centrifugation at 4°C. The fusion protein was captured with 600 µl glutathione agarose resin (BBI Life Science, Shanghai, China, Cat. No. C600031-0010) at 4°C for 30 min and then collected by low-speed centrifugation. To purify the fusion protein, the GST beads were washed with 20 mL washing buffer three times. The conc. of CXCL10 was determined by comparing its intensity with 0.4 mg/mL BSA (Fig. 3H).
To identify CXCL10-interacting proteins in ovaries, the ovarian tissue of the mice was lysed in the lysis buffer (Yeasen), and the ovarian lysate was incubated with CXCL10-bound glutathione agarose beads at 4°C for 4 h. The beads were washed with lysis buffer and washing buffer, then the antibody immunocomplex was sent to Biotech-Pack (Beijing, China) for mass spectrometry analysis of CXCL10-interacting proteins. The raw data generated by mass spectrometry were submitted to the ProteomeXchange Consortium (http://proteomecentral.proteomexchange.org) through the iProX partner repository and can be accessed using the dataset identifier PXD047305.
Cell culture, plasmid transfection, and co-immunoprecipitation
Mouse fibrosarcoma cells (MCA205) were obtained from the National Cancer Institute (Shanghai Yu Bo Biotech, Shanghai, China, Cat. No. YB867). Cells were cultured in RPMI-1640 with 10% FBS. MCA205 cells were transfected with pcDNA3.1(+)-IL18R1-EGFP-StrepII and pcDNA3.1(+)-CXCL10-TagRFP-Flag for immunoprecipitation. A total of 2 × 106 cells were lysed in 250 µL IP buffer, and protein A/G beads (Yeasen) were pre-incubated at 4°C for 4 h to remove nonspecific binding. Next, 3 µg of mouse anti-Strep II-Tag monoclonal antibody or rabbit anti-DDDDK-tag (Flag) monoclonal antibody, along with rabbit or mouse control IgG, were coupled to the protein A/G beads in 250 µL IP buffer at 4°C for 4 h on a rotating wheel. Subsequently, the protein A/G-coupled control IgG or specific antibodies were incubated with pre-cleaned MCA205 cell lysates at 4°C overnight. Finally, after washed three times in IP buffer, protein blot analysis was conducted on the immunocomplexes bound to the anti-Strep II-Tag monoclonal antibody or rabbit anti-DDDDK-tag (Flag) monoclonal antibody.
Ovarian hematoxylin-eosin staining and follicle counting
To minimize the systematic errors caused by the estrus cycle, for all oocyte-related experiments and follicle counting, we used PMSG (5 IU per mice) to synchronize the cycle and promote follicle maturation. 48 h after PMSG injection, mice were sacrificed and the ovaries were harvested; one ovary was frozen in liquid nitrogen for protein sample preparation, and the other was washed with 0.9% NaCl solution, fixed with 4% paraformaldehyde (PFA) overnight, embedded in paraffin, and sectioned continuously at a thickness of 5 µm. The sections were deparaffinized in xylene, rehydrated gradually in a high to low concentration ethanol and distilled water, stained with hematoxylin and eosin, dehydrated in ethanol, cleared in xylene, and mounted with neutral resin (Solarbio, Beijing, China) for follicle counting under a microscope (Nikon Eclipse SI, Japan).
Every other section was counted because the distance between every three sections is approximately the size of an oocyte nucleus, and only visible and clearly identifiable follicles were included in the count. The follicle stages were classified according to the Pedersen criteria (19, 20). Primordial or primary follicles were surrounded by a single layer of flattened or cuboidal granulosa cells respectively, follicles that had multiple layers of cuboidal granulosa cells surrounding the oocyte were defined as secondary follicles, whereas follicles that had a clear cavity containing follicular fluid were defined as antral follicles (Fig. 1C).
Masson staining
Mouse ovaries were collected and washed with 0.9% NaCl solution, then soaked in 4% PFA (paraformaldehyde) and fixed overnight on a rotary shaker. The ovaries were embedded in paraffin and cut into 5 µm-thick sections. The sections were stained with the masson staining solution according to the manufacturer's protocol (SbjBio, Nanjing, China). In brief, the sections were dewaxed and incubated in Bouin's solution overnight at room temperature and were then stained with Aniline Blue and Scarlet to visualize collagen fibers and nuclei, respectively, under dark conditions at 4°C. After differentiation with Azure A, phosphomolybdic acid, and Fast Green, the sections were dehydrated, mounted, and observed under a microscope (Nikon Eclipse SI, Japan) after weak acid treatment.
Immunofluorescence and immunohistochemistry in paraffin sections
The paraffin sections were dewaxed and hydrated and then boiled in a citrate buffer for antigen retrieval. For immunohistochemistry, the sections were incubated in 3% hydrogen peroxide at room temperature for 15 min. The sections were circled with an immunohistochemical pen. After blocking with goat serum for 1 h, the paraffin sections were incubated with the primary antibody overnight at 4°C. For immunofluorescence, the next day, the secondary antibody and DAPI (4', 6-diamino-2-phenylpyridine) nuclear staining were applied to the paraffin sections, which were then mounted with an anti-quenching solution. For immunohistochemistry, the next day, the rabbit two-step detection kit (ZSGB-BIO, Beijing, China, Cat No. PV-9001) and Diaminobenzidine (DAB) chromogenic kit (ZSGB-BIO, Cat No. ZLI-9017) were employed according to the manufacturer’s instructions. The paraffin sections were counterstained with hematoxylin, dehydrated, cleared, and mounted with neutral resin (Absin Biotech, Shanghai, China, Cat No. abs9177). Fluorescence imaging was performed under a confocal microscope (Zeiss LSM 810, Germany or Nikon AXR, Japan), and immunohistochemistry imaging was performed under a microscope (Nikon Eclipse SI, Japan).
Oocyte collection and in-vitro maturation
For ovulated oocytes, mice were first injected with 5 IU PMSG (Pregnant Mare Serum Gonadotropin, Ningbo Second Hormone Factory (NSHF), Ningbo, China) I.P.; 48 h later, mice were injected with 5 IU HCG (Human Chorionic Gonadotropin, NSHF) to induce ovulation. 12 h later, mice were sacrificed and the ampulla of fallopian tube was torn open with two needles, the ovulated COCs (cumulus-oocyte complex) with maturated MII (metaphase II) oocytes were released into HEPES buffer.
For fully-grown GV (germ-vesicle) oocytes, ovaries were harvested as above, large antral follicles were punched with a syringe needle in HEPES (4-(2-Hydroxyethyl)-1-piperazineethanesulfonic acid) buffer and COCs were released; nude oocytes were separated from COCs by repeated blowing-and-suction with a mouth glass pipette (about 160 µm in diameter) in a MEM (Minimum Essential Medium) + medium (0.01 mM EDTA, 0.23 mM Na-pyruvate, 0.2 mM penicillin/streptomycin, and 3 mg/ml BSA in MEM, Thermo Fisher). Every 50 oocytes were cultured in 100 µL mini-drops of MEM + containing 20% FBS covered with mineral oil in an incubator with at 37.0°C, 5% O2, 5% CO2 in a humidified atmosphere. Before the experimental treatment, 2.5 µM milrinone was added to all media to inhibit the onset of meiosis.
Immunofluorescence staining of oocytes
After a brief rinse with PBS/0.05% PVP (polyvinylpyrrolidone, to prevent adhesion), oocytes were permeabilized with 0.5% Triton X-100/PHEM for 5 min, fixed in 3.7% PFA/PHEM (18.14 g Pipes ,6.5 g Hepes ,3.8 g EGTA ,0.99 g MgSO4,pH 7.0 w/ KOH) for 20 min, and washed three times (10 min each) with PBS/PVP. The oocytes were then incubated at room temperature in blocking buffer (1% BSA/PHEM, 100 mM glycine), followed by overnight incubation at 4°C with the primary antibody. After washed three times (10 min each) with PBST (PBS containing 0.05% Tween-20), the oocytes were incubated with a fluorescently labeled secondary antibody at room temperature for 45 min. The oocytes were stained with DAPI for 15 min, washed three times with PBST, and mounted on a glass slide with double-sided tape to secure the edges of the coverslip. Excess water was removed, an anti-quenching agent was added, and the coverslip was sealed with colorless nail polish around the edges. Imaging was performed under a confocal microscope (Zeiss LSM 810, Germany or Nikon AXR, Japan).
In vitro culture and treatment of mouse ovaries
Ovarian culture medium was α-MEM (Gibco, Cat No. C12571500BT) supplemented with 3 mg/mL BSA, 0.23 mM pyruvic acid, 50 µg/mL vitamin C, 0.03 U/mL FSH (Follicle Stimulating Hormone, Sigma, Cat No. F4021), 75 mg/L penicillin and 50 mg/L streptomycin. Gelatin sponges of an appropriate size were cut and placed in 24-well culture plates with about 100 µL culture medium. Mouse ovaries were obtained as above, separated, and cut into small pieces, then placed on the gelatin sponges. Ovary were treated 12 h. For Fig. 3P-S, the final conc. of purified recombinant CXCL10 and CXCL10 antibody were 1 µg/mL and 10 µg/mL respectively; for Fig. 6I-M, Fig. 7F-J, and Fig. 8G-M, the final conc. of purified recombinant CXCL10 and IL18R1 antibody were 1 µg/mL and 10 µg/mL respectively.
Image processing, measurement, and statistical analysis
The signal intensity in the original tif images (blot, DNA gel, immunofluorescence image, etc) were measured in image j. All statistical graphs showing western blots and DNA gels are based on three to six independent repetitions, follicle counting was based on five independent repetitions. Statistics on immunofluorescence image, masson staining, immunohistochemistry are based on three independent repetitions. Each dot on the graphs represents one data point. Detailed information about repeat times and number of data points are in figure legend. When the standard error of all individual data points in a group collected randomly was significantly smaller than the average value, the corresponding sample size was deemed appropriate and reliable. The data are presented as the mean ± standard error of the mean (SEM). For statistical comparison between two groups, we employed unpaired two-tailed t-test of GraphPad (Prism, San Diego, USA); for statistical comparison between three or more groups, we used ANOVA (one-way nonparametric analysis of variance, Prism). Statistical significance was determined at p-values less than 0.05.