Chemical and reagents
Anti-IKBKE (#3416P), anti-phospho-AKT (Ser473, #4058S), and anti-AMPK (#5831S) antibodies were purchased from Cell Signaling Technology, Inc (Shanghai China). Anti-mTOR (#35373), anti-phospho-mTOR (Ser2448, #11221), and anti-caspase-3 (#27525) antibodies were purchased from Signalway Antibody (College Park, MD, USA). Anti-AKT (#A18675), anti-Bcl2 (#A19693), and anti-Bax (#A7626) antibodies were purchased from ABclonal (Boston, MA, USA). Anti-phospho-AMPK (Ser172, # ARG51678) antibody was purchased from Arigo (Taiwan, China). Goat anti-mouse IgG-HRP, goat anti-rabbit IgG-HRP and GAPDH antibodies were purchased from Utibody (Tianjin, China). Amlexanox was purchased from Selleck.cn (Shanghai, China), and TMZ was purchased from Solarbio Science & Technology (Shanghai, China). Both components were dissolved in dimethyl sulfoxide (DMSO) (Louis, MO, USA) to prepare a stock concentration of 100 mM (TMZ) and 500 mM (amlexanox), respectively, and stored at -20°C.
Cell culture
The GBM cell line (U87 MG) was kindly provided by professor Chunsheng Kang, and was maintained in Dulbecco's modified Eagle's medium (DMEM, HyClone, Logan, UT, USA) supplemented with 10% fetal bovine serum (FBS, Gibco, Thermo Fisher Scientific, Inc., Waltham, MA, USA) and 100 U/mL penicillin/streptomycin (Solarbio Science & Technology, Co., Ltd., Shanghai, China), and cultured in a 95% humidified atmosphere with 5% CO2 at 37°C.
Primary human glioblastoma cells
After obtaining informed consent, fresh tumor samples, classified as grade IV of astrocytoma based on the World Health Organization (WHO), were obtained from a patient undergoing surgical treatment at Tianjin Medical University General Hospital. Within 1 h of removal, a part of the resected tissues was washed and enzymatically digested with collagenase at 37°C for 1 h.. Then, the undigested tissues were removed through centrifugation, and the rest of the sample was mixed with F12 (Gibco, Thermo Fisher Scientific, Inc.) medium supplemented with 10% FBS and 100 U/mL penicillin/streptomycin and maintained at 37°C in a 5% CO2 incubator.
Cell viability assay
The Cell Counting Kit-8 (CCK-8) assay (Dojindo EU GmbH, Beijing, China) was used to evaluate cell viability. In brief, both cells (U87 MG cell and primary GBM cell) in the log growth phase were seeded in 96-well plates at the density of 3×103 cells per well and incubated overnight in 200µl DMEM media. Then, the cells were treated with designated concentration of TMZ or amlexanox alone or both for 24, 48, 72 h and compared with negative control (NC) treated with DMSO. After incubation, 10 µl CCK-8 was added to each well according to the manufacturer’s instructions, and the cells were incubated for 2 h at 37°C. Finally, the OD value was determined at 450 nm (OD450) by a microplate reader (Synergy2, BioTek, VT, USA).
Colony formation assay
The assay included four groups: NC, TMZ, Amlexanox, and TMZ+amlexanox group. In brief, five hundred U87 MG or primary GBM cells were seeded in six-well plates. After incubation overnight, both cell types were treated with DMSO, desired concentration of TMZ and amlexanox, alone or in combination, and the medium was changed once every 5 days for 2 weeks. When cells in colony were almost more than 50 cells, methanol and crystal violet were used to fix and stain cell colonies, and colonies with more than 50 cells were counted by using an inverted microscope (Olympus, Japan). The number of colony in each group was statistically analyzed.
Apoptosis assay
As the same groups as colony formation assay, there were four groups in this assay. Annexin V-fluorescein isothiocyanate (FITC)/propidium iodide (PI) apoptosis kit (Dojindo EU GmbH, Beijing, China) was used to detected apoptosis cells. In brief, both U87 MG and primary GBM cells (1-1.5×105 cells/well) in the log growth phase were plated in six-well plates. After treated with DMSO, desired concentration of TMZ and amlexanox, alone or in combination, for 48 h, both cells were harvested through trypsinization without EDTA and washed with ice-cold phosphate-buffered saline (PBS). Next, cells were re-suspended in 500 µl binding solution containing 5 µl annexin-V and 5 µl PI according to manufacturer’s instruction. After incubating for 15 min at room temperature, cells apoptosis was immediately analyzed by a FACScan flow cytometer (BD Biosciences), and further statistical analysis of apoptotic cells was conducted using FlowJo software.
Western blotting
Similarly, this assay were also divided into four groups: NC, TMZ, Amlexanox, and TMZ+amlexanox group. In brief, U87 MG and primary GBM cells were seeded in 10cm dishes (Falcon) and cultured overnight. After treated with DMSO, desired concentrations of TMZ and/or amlexanox for 48 h, cells were harvested and lysed in RIPA buffer (Beijing Solarbio Science & Technology Co., Ltd.) supplemented with a protease inhibitor mixture (APExBIO, USA). Then cells lysed fully were collected and centrifuged at 12000 r/min for 15 min. Supernatants were moved into another tube, and concentrations of the total proteins were determined using the bicinchoninic acid (BCA) assay kit (Thermo Fisher Scientific, Inc.) based on the manufacturer’s instructions. Equivalent amounts of proteins were separated by 6, 10 or 12% SDS-PAGE gels and then transferred to polyvinylidene fluoride (PVDF) membranes (Billerica, MA, USA). After blocking in 5% skim milk at 37°C for 1 h, the membranes were incubated with primary antibodies overnight at 4°C against rabbit anti-Bcl2 (1:1000 dilution), rabbit anti-Bax (1:1000 dilution), rabbit anti-active Casespase-3 (1:1000 dilution), rabbit anti-IKBKE (1:1000 dilution), rabbit anti-AKT (1:1000 dilution), rabbit anti-phospho-AKT (1:1000 dilution), rabbit anti-AMPK (1:1000 dilution), rabbit anti-phospho-AMPK (1:1000 dilution), rabbit anti-mTOR (1:1000 dilution), rabbit anti-pospho-mTOR (1:1000 dilution), followed by incubation with corresponding HRP-conjugated second antibodies (1:10000 dilution) for 1 h at room temperature. GAPDH was considered an internal reference for loading. Antigen-bound antibodies were detected using the SuperSignal West Pico Plus Chemiluminescent Substrate (Thermo Fisher Scientific, USA).
Migration assay
To assess the migration ability of U87 MG and primary GBM cells after treatment for 48 h, scratch wound healing assay was conducted. Groups were the same as above. In brief, treated cells (3× 105 cells/well) were seeded into six-well plates; when the cells reached 80-90% confluence in a monolayer, scratch wounds were made using a 200 µL pipette tip. Then, cell debris was removed, and a microscope was used to confirm the uniform scratch width of every group. After incubation at 0, 12 and 24 h, five different fields of each well were measured and photographed using a phase-contrast microscope. In addition, Transwell filters with 8-µm pores (Corning Costar, NY, USA) (without Matrigel) were also used to evaluate the migration ability of treated cells. The assay was conducted as described in a previous report [21].
Invasion assay
The invasion capacity of treated U87 MG and primary GBM cells was evaluated using Transwell assay with inserts of 8-µm pore size. The groups were also the same as above. In brief, after treated for 48 h, cells were resuspended in 200 µL serum-free DMEM, then seeded into the upper chamber covered with Matrigel (BD Bioscience), diluted with serum-free DMEM, and incubated for 24 h at 37°C. After removing non-invading cells with cotton swabs from the top well , the bottom cells were fixed in 5% methanol, stained with 0.1% crystal violet, and then three independent 200x regions were photographed randomly for each insert.
Immunohistochemistry (IHC) and hematoxylin-eosin (HE) staining
For histological analysis, the tissues were fixed in 4% formaldehyde for IHC and HE analysis. For IHC staining, the slides (5 µm) were dewaxed using xylene and rehydrated using graded alcohols. Antigen retrieval was performed with sodium citrate (pH=6) buffer at 92-99°C for 15 min, and then the slides were cooled at room temperature. Slides were washed three times for 5 min in PBS and incubated with 3% H2O2 for 30 min to block endogenous peroxidases. The slides were blocked using 1% BSA for 30 min at room temperature. Next, slides were incubated at 4°C overnight with primary antibodies against rabbit anti-IKBKE (1:100 dilution), rabbit anti-phospho-AKT (1:100 dilution), rabbit anti-phospho-AMPK (1:100 dilution), rabbit anti-pospho-mTOR (1:100 dilution) before being incubated using biotin-labeled secondary antibody (1:100 dilution) for 1 h at 37°C and incubated again with diaminobenzidine (DAB) (Solarbio Science & Technology, Beijing, China). Finally, slides were counterstained using hematoxylin and mounted. For HE analysis, slides (µm) were dewaxed and rehydrated as the same as IHC staining assay. Then the nuclei were attained using hematoxylin. After rinsed in running tap water, the sections were stained with eosin. Finally, the slides were dehydrated.
Xenograft models
All mouse experiments were conducted according to protocols approved by the Tianjin Medical University Animal Care and Use Committee and followed guidelines for animal welfare. Female BALB/c-nude mice (4 weeks old, approximately 12 g) were purchased from Beijing HFK Bioscience Co., Ltd. To establish an intracranial tumor model, primary GBM cells (5×104 cells) infected with luciferase-encoding lentivirus were stereotactically injected into the right hemisphere. A burr hole was located at a point situated 2 mm lateral from bregma and between bregma and fonticuli minor with a syringe under stereotactic guidance. Seven days after injection, the mice were divided randomly into 4 groups with 15 mice in each group: NC, TMZ alone, amlexanox alone and combination (TMZ and amlexanox) grorp. The NC group was treated with DMSO, and the treated groups were intraperitoneally given amlexanox alone (100 mg/kg, TMZ alone (5 mg/kg) or TMZ (5 mg/kg) and amlexanox (100 mg/kg), respectively, for 5 days. After 2 days without injections, the same dosing regimen was continuously repeated. Tumor growth was measured once every week using BLI at a designated time with the IVIS Spectrum Live Imaging System (PerkinElmer, USA). After 4 weeks post-injection, 3 mice in each group were sacrificed, and the brains were extracted and fixed in 10% formalin then embedded in paraffin for HE and IHC. The remaining mice were used for survival analysis.
Statistical analysis:
All experimental data are represented as the mean ±Standard deviation (SD). Statistical analysis was performed using GraphPad Prism 6 software. One-way analysis of variance (ANOVA) was carried out to assess differences between multiple groups. The Kaplan-Meier method was used to evaluate difference in survival among the groups. P < 0.05 was regarded as statistically significant.