1. Isolation and culture of human DMSCs and BMSCs
Human decidual samples were collected from healthy women aged 20–35 years old who underwent selective vaginal surgery to terminate early pregnancy. Human decidual tissue was washed with saline, and blood clots were removed. All samples were stored in phosphate-buffered saline (PBS) containing 1% penicillin/streptomycin, cut into small pieces (1–2 mm), digested with 0.25% trypsin and 0.2% collagenase IV (Yeasen, Shanghai, China) for 1 h. Cell digests were collected every 15 min and passed through a nylon mesh (200 µm) to remove large particulate matter. Then, complete medium containing 10% fetal bovine serum (FBS; Sciencell, Sandiego, CA, USA) was added to terminate digestion. After centrifugation, DMSCs were cultured overnight in DMEM/F12 (Hyclone, South Logan, Utah, USA) containing 10% FBS. BMSCs were derived from female patients (20–35 years old) who underwent median sternotomy during open-heart surgery. Equal volumes of the lymphocyte separation solution and bone marrow were mixed and centrifuged, and the mononuclear cell layer was collected and washed twice with PBS. BMSCs were seeded in culture flasks with DMEM/F12 (HyClone) containing 10% FBS (ScienCell). A follow-up experiment was performed using the third-generation DMSCs/BMSCs. All the participants provided informed consent. All procedures performed in the experiments involving animals complied with the ethical standards of the First Affiliated Hospital of Anhui Medical University.
2. Morphology and identification of MSCs
The morphology and number of cells were observed under a light microscope (Leica, Germany) to determine the growth status of MSCs. To identify the MSC phenotypes, the cell suspension was mixed with CD73-PerCP, CD90-FITC, CD105-APC, CD34-FITC, and CD45-PerCP antibodies and incubated for 30 min in the dark. Stained cells were analyzed using flow cytometry (BD, USA).
3. Comparison of MSC proliferation capacity
DMSCs and BMSCs were cultured in a medium containing 10% serum at a density of 1 × 103 in 96-well plates, followed by incubation for 12, 24, 48, and 72 h. The rate of cell proliferation was determined using a Cell Counting Kit-8 (Dojindo, China). DMSCs and BMSCs were seeded at densities of 250 and 500 cells/well, respectively, in six-well plates for two weeks. Cells were fixed with 4% paraformaldehyde for 15 min, rinsed with PBS, stained with crystal violet for 10 min, and rinsed again. Colonies containing > 20 cells were manually counted as clonal colonies.
4. MLE-12 and mouse lung fibroblast (MLF) isolation and culture
The murine lung epithelial type II cell line MLE-12 was purchased from the American Type Culture Collection. Upon thawing, the cells were cultured in DMEM/F12 (HyClone) containing 10% FBS (ScienCell). Primary MLFs were extracted from the lung tissues of 4-week-old C57BL/6J mice. Briefly, mice were sacrificed after being anesthetized with an intraperitoneal injection of tribromoethanol (500 mg/kg) to collect lung tissues. Lung tissues were washed with PBS and placed on a clean dish. Under aseptic conditions, lung tissues were trimmed into blocks approximately 1 mm in diameter. The tissue blocks were transferred to DMEM/F12 (HyClone) containing 10% FBS (ScienCell) for 72 h. MLFs were purified from macrophages by passage, and cells at passage five were used for the experiments.
5. Coculture experiments
MLE-12 cells were seeded into the lower chamber, MLE-12 cells were treated with BLM (5 ng/mL; Selleck, China) in DMEM/F12 medium for 24 h, and DMSCs or BMSCs (1:1 ratio) were added to the upper chamber of a 6-well transwell apparatus (Corning Costar). Four groups were established as follows: control group, MLE-12 cells; BLM group, MLE-12 cells treated with BLM; BMSC group, MLE-12 cells treated with BLM and cocultured with BMSC; and DMSC group, MLE-12 cells treated with BLM and cocultured with DMSC. Similarly, MLFs were seeded into the lower chamber, MLFs were treated with tumor growth factor (TGF)-β1 (3 ng/mL; Thermofisher, China) in DMEM/F12 medium for 24 h, and DMSCs or BMSCs (1:1 ratio) were added into the upper chamber of a 6-well transwell apparatus. Four groups were distributed as follows: the control group, MLFs; the TGF-β1 group, MLFs treated with TGF-β1; BMSC group, MLFs treated with TGF-β1 and cocultured with BMSC; and DMSC group, MLFs treated with TGF-β1 and cocultured with DMSC.
6. Apoptosis detection
The viability of BLM-treated MLE-12 cells was evaluated using live/dead staining. A live/dead cell staining kit (Solarbio, Beijing, China) was used according to the manufacturer’s instructions. The Calcein-AM was added to the plate and incubated for 20 min, 5 µL of propidium iodide (PI) was added, and incubation continued for 5 min. After washing with PBS, photographs were taken under an inverted fluorescence microscope, and live (green fluorescence, 488 nm) and dead (red fluorescence, 550 nm) cells were simultaneously detected.
Apoptosis in BLM-treated MLE-12 cells and TGF-β1-treated MLFs were determined using flow cytometry with annexin V/PI double staining (Beyotime, Shanghai, China). MLE-12 cells were cocultured with MSCs for 24 h, digested with pancreatin, and incubated with annexin V and PI. After washing with PBS, the cells were suspended in PBS, and flow cytometry was performed.
7. Clonogenic, scratch, and transwell invasion assays
MLE-12 cells were seeded in 6-well plates at a density of 1000 cells/well in four different groups and cultured for four days. Cells were fixed with 4% paraformaldehyde for 15 min, rinsed with PBS, stained with crystal violet for 10 min, and rinsed again. Colonies containing > 20 cells were manually counted as clonal colonies.
The coculture medium was used to observe healing in the scratched areas. For this assay, MLE-12 cells were seeded into 6-well plates in coculture medium and grown to 80–90% confluency. Then, a wound track was introduced by scraping the cell monolayer with a 100-µL yellow pipette tip. The monolayer wound areas were measured at 0 and 48 h after treatment.
The cell invasion assay was performed using 24-well transwell plates (Costar) coated with Matrigel (BD BioSciences) according to the manufacturer's instructions. The MLE12 cells were suspended in a serum-free medium and plated into the upper chamber of the transwell system with a pore size of 8 µm. The bottom chamber was filled with the coculture medium. After incubation for 12 h, the migrating cells in the bottom chambers were fixed with 4% paraformaldehyde, stained with crystal violet, and counted under a microscope.
8. Enzyme-linked immunosorbent assay (ELISA)
Using a transwell chamber coculture experiment system, a coculture experiment was performed in the chambers of 24-well plates (Corning, USA). DMSCs (1 × 104) and BMSCs were inoculated into the upper chamber, and MLFs (1 × 104) were cocultured in the lower chamber for 24 h. MLFs without hMSCs treatment were used as the controls. The secretion levels of interleukin (IL)-10, IL-1β, and IL-6 were measured using ELISA kits (Cusabio, China) according to the manufacturer’s instructions.
9. Immunofluorescence staining
MLFs were cocultured with DMSCs or BMSCs for 24 h using a transwell chamber coculture experimental system. MLFs were rinsed with PBS, fixed with 4% paraformaldehyde at room temperature, permeabilized with Triton X-100 for 5 min, and blocked with 3% bovine serum albumin in PBS for 1 h at room temperature. Then, the MLFs were incubated with anti-α-smooth muscle actin (SMA) (Abcam, China) at 4°C overnight, followed by incubations with Alexa Fluo-635-conjugated goat anti-mouse antibodies for 1 h. The coverslips were washed once with PBS and mounted with a DAPI solution. Images were obtained under a fluorescence microscope (Leika, Germany) and quantified using ImageJ software.
10. BLM-induced pulmonary fibrosis and MSC transplantation
To induce pulmonary fibrosis, the C57BL/6J mice were anesthetized with intraperitoneal tribromoethanol (500 mg/kg). Then, mice were administered intratracheally once with BLM (3 mg/kg) at day 0 and subsequently received 5 × 105 MSCs in 500 µl of PBS via tail vein injection in two and seven days after BLM treatment; this group was referred to as the BMSC or DMSC group. Mice injected with an equal volume of PBS were referred to as the BLM group, and normal C57BL/6J mice served as blank controls.
11. Bronchoalveolar lavage fluid and blood analyses
After anesthesia, blood was drawn from the hearts of the mice into heparinized tubes. Serum samples were separated through immediate centrifugation at 1500 rpm for 10 min. The serum levels of IL-10, IL-1β, IL-6, and TGF-β1 were measured using ELISA kits (Cusabio, China) according to the manufacturer’s instructions. After blood collection, the chest cavity of the mice was opened, the right lung was ligatured, the left lung was lavaged three times through the bronchus with 0.4 mL of PBS, and the liquid was pulled away slowly. The bronchoalveolar lavage fluid (BALF) levels of IL-10, IL-1β, IL-6, and TGF-β1weres measured using ELISA kits. BALF cytospins were prepared, slides were fixed in acetone, and then Wright–Giemsa staining was performed. Finally, an optical microscope was used to count the total number of leukocytes at high magnification.
12. Immunohistochemistry and Masson’s trichrome staining
Lung tissues were isolated and fixed with 4% paraformaldehyde (Biosharp, Shangh ai,China) for 48 h before being embedded in paraffin to prepare 5-mm tissue sections. The tissue sections were deparaffinized and rehydrated using graded levels of xylene and ethanol, placed in a pressure cooker with sodium citrate, boiled, and cooled gradually to room temperature to complete antigen repair. Endogenous peroxidases were blocked with 3% H2O2 for 10 min and incubated with 3% bovine serum albumin in PBS for 1 h at room temperature. The sections were treated with TGF-β1, α-SMA, Col1a1, and fibronectin antibodies overnight at 4℃, following by incubation with horseradish peroxidase-conjugated secondary antibodies (Beyotim e,Shangh ai,China) for 60 min followed by diaminobenzidine, and counterstained with hematoxylin. Immunohistochemical staining was performed using a standard light microscope. Masson’s trichrome and hematoxylin and eosin staining were performed according to the manufacturer’s instructions (Solarbio, Beijing, China), and pathological changes in the lung tissue were assessed using an optical microscope.
13. Determination of hydroxyproline
The collagen and hydroxyproline contents of the lung tissue were determined using the hydroxyproline method, and approximately 45 mg of the sample was weighed into test tubes according to the procedures described in the instructions of the hydroxyproline assay kit (Jiancheng, Nanjing, China). The supernatant was collected and added to a 96-well plate, and the absorbance of the supernatant was measured at 550 nm.
14. Measurements of lung function
Invasive pulmonary function tests were performed using the FlexiVent system (SCIREQ, Montreal, QC, Canada). Mice were anesthetized, their tracheas were cannulated under direct vision, and attached to a computer-controlled ventilator for forced oscillation measurements, s set at 150 beats/min with a tidal volume of 10 mL/kg. Each mouse was measured three times (coefficient of determination > 0.95), and the mean was used as the measured value for each mouse.
15. Micro-computed tomography (micro-CT) measurement validation
CT scanning was used to measure lung tissue density and degree of pulmonary fibrosis in each group of mice. A plain CT scan was performed as follows: mice were anesthetized with an intraperitoneal injection of tribromoethanol, placed in the supine position on the bed of the CT scanner, and the living lung tissue of the mice was scanned after setting the scanning parameters. The images were processed using a post-processing system workstation, all CT images were input into the software in the form of raw data, and the analysis results were obtained. To evaluate the severity of pulmonary fibrosis, both structural and morphological changes in lung tissue were observed.
16. Western blotting
Total protein was extracted from MLE12 cells, MLFs, BALF, and lungs using RIPA lysis buffer (Beyotime, Beijing, China) containing protease and phosphatase inhibitors. The protein concentration of the lysates was determined using the BCA assay (Beyotime, China).
Proteins were separated using sodium dodecylsulfate-polyacrylamide gel electrophoresis (10% gels) and transferred onto 0.22 µm polyvinylidene fluoride membranes (Millipore, China). Membranes were incubated with the primary antibody and then rocked gently overnight at 4°C, with anti-E-cadherin (Abcam, Shanghai, China), anti-N-cadherin (Abcam, Shanghai, China), α-SMA (Abcam, Shanghai, China), Col1a1 (Abcam, Shanghai, China), fibronectin (Abcam, Shanghai, China), surfactant protein C (SPC; Abcam, Shanghai, China), Smad3 (Abcam, Shanghai, China), BAX (Abcam, Shanghai, China), Bcl-2 (Abcam, Shanghai, China), cleaved casepase 9 (Affinity, Jiangsu, China), and cleaved casepase 3 (Affinity, Jiangsu, China). After incubation with horseradish peroxidase-labeled secondary antibodies (Abcam, Shanghai, China) at 37°C for 1 h, the protein bands were visualized using a Chemiluminescence Imaging System (Tanon, China).
17. Statistical analysis
All statistical analyses were performed using GraphPad Prism 5.0 software, and data are expressed as mean ± SD. A t-test was performed to compare two groups, anda one-way analysis of variance (ANOVA) was performed to compare multiple groups. P < 0.05 was considered statistically significant, and the experiments were repeated at least three times.