2.1. Cell culture and transfection
OC cells OVCAR3, SKOV3 and CAOV3 were cultured in DMEM (Hyclone) containing 10% fetal bovine serum (FBS) in a humidified incubator with 5% CO2 at 37℃. OVCAR3, SKOV3 and CAOV3 cells were transfected with shFZD5 lentivirus (GV112/hU6- MCS-CMV-Puromycin, Genechem, China) to stably knockdown FZD5 expression. Puromycin (2 µg/ml, Sigma) was used to select cells at 48 hours after infection. The target sequence for shFZD5-1 is 5′-CGGCATCTTCACGCTGCTCTA-3′, for shFZD5-2 is 5′-GGCCACCTTCCTCATCGACAT-3′, and for control is 5′-TTCTCCGAACGTGTCACGT-3′. FZD5-knockdowned cells was transfected with ALDH1A1 overexpression plasmid (GV219/CMV-MCS-SV40-Neomycin, Genechem, China), using Lipofectamine 3000 (Invitrogen) according to the manufacturer's instructions.
2.2. Western blot
Cells are lysed using RIPA lysis buffer containing 1% PMSF for 1 hour on ice. The cell lysates were centrifuged at 12,000×g for 40 minutes at 4℃. The protein concentration of the supernatant was determined using a BCA assay. Total protein lysate (30µg) was separated by gel electrophoresis on a 12% SDS-PAGE gel and transferred to a PVDF membrane. The membranes were blocked in Tris-buffered saline-Tween 20 (TBST) containing 5% skimmed milk for 2 hours at room temperature. The membranes were incubated with primary antibodies at 4℃ overnight. Subsequently, the membranes were washed 3 times with TBST and then incubated with secondary antibodies for 2 hours at room temperature. The chemiluminescence (ECL) detection system (Tanon 5200, Shanghai, China) was applied for the imaging of the target protein expression. The following primary antibodies were used: FZD5 (Cell Signaling Technology, #5266, USA, 1:1000), E-cadherin (Cell Signaling Technology, #3195, USA, 1:1000), ALDH1A1 (Santa Cruz, sc-374076, USA, 1:500), BRCA1 (Cell Signaling Technology, #9010, USA, 1:1000), RAD51 (Abcam, ab133534, UK, 1:1000), active β-catenin (Cell Signaling Technology, #8814, USA, 1:1000), Akt (Cell Signaling Technology, #9272, USA, 1:1000), pAkt (Cell Signaling Technology, #9271, USA, 1:1000), pErk1/2 (Cell Signaling Technology, #4370, USA, 1:1000), and pJnk1/2 (Cell Signaling Technology, #9251, USA, 1:1000).
2.3. Immunofluorescence
Cells were inoculated on slides in 24-well plates at 40–50% confluence and grown in an incubator at 37℃ for 24 hours. Then the cells were fixed with paraformaldehyde for 20 minutes and washed with PBS 3 times. Cells were permeabilized with 0.5% Triton X-100 for 5 minutes at room temperature, then blocked with 5% donkey serum for 1 hour at room temperature and incubated with primary antibody at 4℃ overnight. Subsequently, the slides were incubated with fluorescent secondary antibody for 2 hours. The nuclei were stained with DAPI in the dark and visualized using a laser scanning confocal microscopy. The following primary antibodies were used: E-cadherin (Cell Signaling Technology, #3195, USA, 1:200), EPCAM (Immunoway, YM6053, USA, 1:100), γH2AX antibody (Cell Signaling Technology, #9718, USA, 1:400), and active β-catenin (Cell Signaling Technology, #8814, USA, 1:800).
2.4. Phalloidin staining
Cells were fixed with 4% paraformaldehyde at room temperature for 10 minutes. The slides were washed with PBS 3 times, and incubated with 0.5% Triton X-100. Then the slides were incubated with TRITC-conjugated Phalloidin solution (YEASEN, Shanghai, China) at room temperature for 30 minutes. The nuclei were stained with DAPI. Cell morphology was visualized by a laser scanning confocal microscopy.
2.5. Correlation analysis of gene expression
Gene expression at mRNA levels in a panel of human OC cell lines was investigated in CCLE database. Correlation analysis among genes, including FZD5, CDH1, EPCAM, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH1L1 and ALDH1L2, was performed by Pearson statistics.
2.6. Cell proliferation assay
Cells (OVCAR3: 103; SKOV3: 2×103; CAOV3: 103) were resuspended with 100µl medium, seeded into 96 wells plates and incubated for the indicated length of time. Then cells were treated with a 10µl Cell Counting Kit-8 reagent (CCK8, Dojindo Molecular Technologies, Japan) and incubated at 37℃ for 4 hours. Absorbance values at 450 nm were measured at different time points using a microplate reader (Bio-Rad Laboratories, USA).
2.7. Colony formation
2×103 cells were seeded and cultured in 3.5cm culture dishes for 2 weeks until visible colonies formed. Cells were then fixed with 4% paraformaldehyde for 20 minutes. Colonies were washed with PBS, stained with 1% crystal violet for 20 minutes, counted and photographed.
2.8. Cell cycle assay
1×106 cells were collected, washed with PBS and fixed with 70% ethanol at 4℃ overnight. Then cells were treated with 500ul PI/RNaSeA staining solution (KeyGEN BioTECH, China) for 1 hour at room temperature in the dark. The samples were analyzed by an FACS Calibur Flow Cytometer (BD, USA).
2.9. Real-time PCR
RNAiso Plus (Takara, China) was added to the collected cells to extract total RNA following the standard instructions. After RNA quantification, reverse transcription was performed with the cDNA synthesis Kit (Takara, RR047A, China) with 1µg RNA. Then Real-time PCR was performed with a TB Green™ Premix Ex Taq II kit (Takara, China) and an ABI PRISM 7300 Sequence Detection system (Applied Biosystems, USA). GAPDH was used as internal control. Gene expression was analyzed by 2−ΔΔ Ct method. The primers are listed in Table 1.
Table 1
Primers for real-time PCR
genes | Primers (5′–3′) |
FZD5-forward FZD5-reverse ALDH1A1-forward ALDH1A1-reverse RAD51-forward RAD51-reverse BRCA1-forward BRCA1-reverse GAPDH-forward GAPDH-reverse | TCCTCTGCATGGATTACAACC GACACTTGCACACGAACG GACAATGCTGTTGAATTTGCAC AAGGATATACTTCTTAGCCCGC TGGCAGTGGCTGAGAGGTATGG GGTCTGGTGGTCTGTGTTGAACG AGGTCCAAAGCGAGCAAGAGAATC CTGTGGGCATGTTGGTGAAGGG CAGGAGGCATTGCTGATGAT GAAGGCTGGGGCTCATTT |
Table 2
OC HR CSCs PARPi GPCR EMT | ovarian cancer homologous recombination cancer stem-like cells PARP inhibitor G protein-coupled receptor epithelial-mesenchymal transition |
2.10. ALDH+ subpopulation assay
1×106 cells were suspended in 1ml ALDEFLUOR™ Assay Buffer (STEMCELL Technologies, USA). 5µl ALDEFLUOR™ Reagent was added in each tube. Then the mixture was divided into two equal parts. Diethylaminobenzaldehyde (DEAB) was added into one part as negative control. After incubation at 37℃ for 45 minutes and centrifugation, cells were re-suspended in 500µl ALDEFLUOR™ Assay Buffer. The samples were analyzed by an FACS Calibur Flow Cytometer (BD, USA).
2.11. Extreme limiting dilution analysis
Cells (100, 50, 25, 10/well) were cultured in complete MammoCultTM Human Medium (STEMCELL Technologies, USA) in 96-well ultra-low-attachment plates (Corning, USA) for 7 days. Stemness was evaluated in https://bioinf.wehi.edu.au/software/elda/.
2.12. HR repair assay
Cells were transiently co-transfected with DR-GFP and I-SceI plasmids (Genechem, China) using Lipofectamine 3000 (Invitrogen) according to the manufacturer's instructions. Then cells were cultured for 3 days. The percentage of GFP+ cells was analyzed by an FACS Calibur Flow Cytometer (BD, USA).
2.13. Cytotoxicity assay
After inoculation into 96-well plates at a density of 5000/well overnight, cells were treated with Cisplatin or Olaparib at different concentrations for 48 hours. Then cells were treated with 10µl CCK8 reagent (Dojindo, Japan) and incubated at 37℃ for 4 hours. Absorbance values at 450nm were measured using a microplate reader (Bio-Rad Laboratories, USA)
2.14. Tumorisphere toxicity assay
5×103 cells were treated with or without Cisplatin (5µM) in complete MammoCultTM Human Medium (STEMCELL Technologies, USA) in 6-well ultra-low-attachment plates (Corning, USA) for 7 days. Tumor spheres were counted in randomly selected 5 fields.
2.15. Apoptosis assay
1×106 cells were collected and washed with PBS. Annexin V-PE/7- AAD Apoptosis Kit (KeyGEN BioTECH, China) was used to analyze cell apoptosis. Cells were incubated in 500µL binding buffer with 5µL 7-AAD at room temperature in the dark for 15 minutes. The number of apoptotic cells was measured by an FACS Calibur Flow Cytometer (BD, USA).
2.16. Mice and in vivo study
Female BALB/c nude mice (5 ~ 6 weeks of age, 18–20 g) were purchased from Weitong Lihua (Beijing, China), and all mice were maintained in the SPF-grade facility of the Department of Animal Experimentation of China Medical University. All studies involving mice were approved by the Animal Ethics Committee of China Medical University. After resuspension with 100ul PBS, 1×106 OC cells were injected subcutaneously into lateral flanks of the mice (n = 5 per group). Tumor volume was calculated by formula: V = 1/2×length×width2. Tumor length and width were measured every 3 days using a vernier caliper. 4 weeks after inoculation, the mice were euthanized and the tumors were harvested. For in vivo chemo-sensitivity assay, mice were given Cisplatin (5mg/kg, intraperitoneal injection) for five consecutive days, once the tumor volume reached approximately 50mm3.
2.17. Statistical analysis
Data were presented as mean ± SD and were analyzed using GraphPad Prism 9. Differences were analyzed by two-sided Student’s t-test, one-way or two-way ANOVA. P value < 0.05 was considered significant.