Participants The study consecutively enrolled 25 newly diagnosed, treatment-naive PD individuals among those referring in the years 2015–2016 to the Centre for PD, Neurology Unit, University Hospital in Pisa, Italy. Inclusion criteria were onset of suggestive symptoms not later than 12 months, age < 80 years, no previous specific treatment, no previous personal history of any neurological disease, including ischemic stroke, no previous history of systemic inflammatory or immunological disease, no anti-inflammatory drugs assumed in the three months preceding the enrolment. Diagnosis matched the UK Parkinson’s Disease Society Brain Bank [20]. All patients performed cerebral SPECT with tracer for Dopamine Transporter, that showed a nigro-striatal degeneration, and brain MRI in order to exclude cerebrovascular complications. An age- and sex-matched control group (CTL, n = 25) was formed, on a volunteer basis, by the spouse of the probands participating in the study.
The day of the study (T0) patients underwent a complete clinical evaluation and a blood routine analysis. Motor symptoms were evaluated by the Unified Parkinson’s Disease rating scale (UPDRS), the cognitive state by Mini Mental State Examination (MMSE) and the disease was staged according to the HoehnYahr scale [21]. Blood samples were collected from an antecubital vein to assess serum/plasma aliquots (frozen at -20 °C until required for quantitation) and circulating lymphomonocytes isolation.
Biochemistry and Mononuclear cells analysis Biochemical parameters (fasting glucose, lipid profile, serum creatinine, uric acid) were measured by standard methods in the biochemistry laboratory of the University Hospital in Pisa.
Lymphomonocytes were isolated from fresh blood samples by density gradient centrifugation (Fycoll Paque, GE Healthcare, Uppsala Sweden), according to the manifacturer’s standard protocol. The resulting cells were immediately frozen (for RNA/protein extraction) or plated 400 × 103 in two-chamber slides and left to adhere for 1 h in incubator; after a fixation step (10 min) in PFA 4% and 3 wash with PBS, the cells were ready for the immunofluorescence experiments.
RNA extraction and quantitative real-time PCR RNA extraction from human cells and animal tissues was performed with QIAcube (Qiagen, Hilden, Germany), a robotic workstation for automated purification of nucleic acids, using RNeasy mini kit (Qiagen) and following the manufacturing protocol. Real Time PCR was performed on an Eco real time instrument (Illumina Inc., San Diego, CA, USA) according to the standard procedure. Transcripts were quantified by TaqMan Gene Expression Assays (TermoFisher-LifeTechnologies). The following primers were used: for human samples, P2 × 7R: Hs00175721_m1; NRLP3: Hs00918082_m1; Caspase-1: Hs00354832_m1; NF-kB: Hs00765730_m1; Amplifications were normalized by GAPDH (Hs02758991_g1); for mouse samples, Parkin: Mm01323528_m1; α-synuclein: Mm01188700_m1; NRLP3: Mm00840904_m1; GAPDH: Mm99999915_g1.
Immunofluorescence and Quantitative analysis of immunofluorescence images The immunofluorescence experiments in human lymphomonocytes and mouse brain tissues were performed overnight at 4 °C with the following antibodies: P2 × 7R (1:100, APR-004 Alomone, Jerusalem, Israel), NRLP3 (1:200, AG-20B-0014 Adipogene, Liestal, Switzerland), α-synuclein (1:100, ab212184 abcam, Cambridge, UK), GFAP (1:500, ab7260 abcam), Iba1 (1:100, sc-32725 S.Cruz), TH (1:200, ab75875 abcam); the next day, specific immunoreactivity was revealed with Alexa Fluor 594-goat anti rabbit and 488-goat anti mouse antibodies (Invitrogen, Thermo Fisher Scientific, Waltham, MA, USA). The images used for the quantitative analysis of immunofluorescence were acquired with a Leica TCS SP8 confocal microscope. After a preliminary analysis of different samples to establish the best conditions for the instrument, the confocal setting was held constant within all experimental sessions. All image analyses were performed using ImageJ (public domain software developed at the NIH). For human lymphomonocytes, stacks of optical sections were collected in three different fields for each patients, and 30 immuno-positive cells were assessed for the quantification. Each single cell area was traced (avoiding the background) and the mean value of signal intensity was calculated; one hundred immuno-positive cells were assessed for each experimental group. In the mouse brain, similar stacks of optical sections were acquired for each animal. Threshold area was established on the base of average background signal. Briefly, for each image transformed in grey scale, the grey value in 3 different non-signal area was measured, and the average value was used to set the threshold; in the obtained binary image, the percentage area of positive pixel was calculated. In the case of not specific green signal in vessels, these parts were masked before calculating the threshold area.
Cytokine levels Plasma levels of IL-1β, IL-18 and α-synuclein were measured by high sensitivity Quantikine enzyme-linked immunosorbent assay (ELISA) Kits (R&D Systems Inc, Minneapolis, MN, USA) following manufacturer’s instructions. The sensitivity of the assay was < 1 pg/ml− 1, with an interassay variability of 4.5%.
Circulating miRNAs Circulating miR-7 and miR-30, likely involved in the pathogenesis of PD [22, 23] were isolated by the robotic workstation QIACUBE (Qiagen) loaded with miRNeasy Serum/Plasma Kit (cat. 217184, Qiagen, Hilden, Germany). After an equilibration period at room temperature, samples were centrifuged to remove cryoprecipitates, and 200 µl of thawed serum were processed following the manufacturer’s instructions. For each patient, the cDNA templates was assessed from 2 µl of sample eluent; we used the TaqMan Advanced miRNA cDNA Synthesis kit (A28007, Applied Biosystems, Foster City, CA, USA). miR-7 and miR-30 expression was measured by TaqMan Advanced MicroRNA Assays (cat. A25576, Applied Biosystems); PCR reactions were run in triplicate, diluting 1:10 3–5 µl of cDNA template, and miRNAs levels were expressed as 2-ΔCt using two references miRNAs (miR-484 and miR-191-5p) selected on the basis of the scientific literature and checking their low variability in our samples.
Intracellular signalling Total proteins were extracted from lymphomonocytes of a subset of PD and CTL individuals to measure total and phosphorylated ERK 1/2, p38 and JNK by WB analysis. Twenty µg protein extracted from lymphomonocytes were diluted in sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) buffer and heated at 100 °C for 5 min. Samples were separated on Any kD Mini -Protean TGX gels (Bio -Rad) and transferred to a polyvinylidene difluoride (PVDF) membrane (Millipore, Billerica, MA, USA). After blocking and repeated washing, blots were incubated overnight with primary antibodies (Cell Signaling, Leiden, The Netherlands) against ERK 1/2 (9102/9101), p38 MAPK (9212/9211) and JNK (9252/9251), and their relative phosphorylated isoforms. After treatment with secondary antibodies, bands were identified by enzymatic chemiluminescence.
Follow up After baseline evaluation, patients underwent a personalized anti-Parkinson treatment on the basis of clinical indications and international guidelines; in detail, 13 patients received levodopa, 8 started dopamine-agonists (rotigotine, pramipexole, or ropinirole), 7 were treated with MAO-B inhibitors (rasagiline or selegiline). All participants were checked after one year of pharmacologic treatment, evaluating levodopa equivalent dose (LED: 319.4 ± 90.6), current medications, disease severity and cognitive status, and repeating the measurement of P2 × 7R, NLRP3 and Caspase-1 expression.
Studies in WT and P2 × 7 receptor KO mice Eight WT (strain C57BL6J, Charles River, Lecco, Italy) and eight P2 × 7R KO mice (Jackson Laboratory, through Charles River were used for the experiments, all carried out in accordance with the EU Directive 2010/63. The study protocol was approved by the Italian Minister for Animal Care (#943/2015-PR). Mice, housed in a germ-free stabularium, were treated for 16 weeks with a high fat diet (HFD) (PF4215, 60% of total calories from fat, from Research Diets Mucedola, Settimo Milanese, Italy), already shown to be able to induce PD [24, 25]. At the end of the 16-week period, mice were deeply anaesthetized with sevoflurane; brains were removed from the skull, and sagittally cut in two part; half part was fixed by immersion in 4% paraformaldehyde, rinsed in phosphate buffer containing 30% sucrose at 4 °C overnight, frozen and sectioned with a cryostat at 50 µ; the other one was immediately frozen on dry ice for RNA isolation.
Substantia Nigra analysis in mice Coronal brain sections (50 µm thick) cut in the cryostat and mounted on non-charged slides were immediately observed with a microscope and sections containing midbrain were recognized on the base of mouse brain atlas. For the subsequent RNA extraction, the ventral midbrain was dissected out from each section using a needle and the tissue was used to quantify NLRP3, Parkin and α-synuclein gene expression by realtime PCR (see RNA extraction and quantitative real-time PCR). A free-floating immunostaining was performed for P2 × 7R, NRLP3, Iba1, GFAP, TH: coronal sections through the substantia nigra were collected in PBS; after a post-fixation step (1 h at room temperature) in PFA 4% and three washes with PBS, serial sections were treated with specific antibodies (see Immunofluorescence).
Availability of data and materials Data shown and analysed in this paper are available from the corresponding author on reasonable request.
Statistical analysis
Results are expressed as mean ± SD. Statistical analysis was carried out using one-way analysis of variance with post-hoc Bonferroni correction, the Kruskal-Wallis test for non-parametric data and paired t-test for comparison between groups. A value of p < 0.05 was considered statistically significant.