2.1. Cell culture
The human cell lines HEK293A and SMMC-7721 were obtained as a gift from Jilin University, while the Huh7 cell line was maintained in the Prevention Laboratory of Tianjin Agricultural College. The HEK293A cell line was cultured in dulbeccos modified eagle medium (DMEM) medium (Hyclone, China) supplemented with 10% fetal bovine serum (Gibco, China), 100 U/mL penicillin, and 100 mg/mL streptomycin (Gibco). SMMC-7721 and L-02 cells were cultured in 1640 medium (Hyclone, China) supplemented with 10% fetal bovine serum (Gibco, China), 100 U/mL penicillin, and 100 mg/mL streptomycin (Gibco, China). All cells were maintained in a 37℃, 5% CO2 incubator.
2.2. Construction of a recombinant adenovirus shuttle vector and recombinant adenovirus packaging
The adenovirus shuttle plasmid GV314-EGFP was linearized by AgeⅠ and NheⅠ for adenovirus packaging and amplification. The target genes were seamlessly cloned, transferred to a linearized adenovirus shuttle vector, and identified through Polymerase Chain Reaction (PCR) and sequencing. The constructed adenovirus shuttle plasmid was co-transfected with the AdGloxde13cre plasmid into HEK 293A cells respectively. The cells were then incubated until a large number of them showed the cytopathic effect (CPE) phenomenon, and 50% of the cells were detached.
Briefly, HEK 293A cells were seeded at 2 × 105 cells into 6 cm culture plates (Corning, United States) in DMEM medium containing 10% Fetal Bovine Serum (FBS). After HEK293A cells adhered to the dish, 2 µg of adenovirus shuttle plasmid, 4 µg of AdGloxde13cre plasmid, and 8 µl of lipofectine were added to the culture media. The mixture was then incubated for 24 h at 37°C. Following incubation, the culture media were changed every 2–3 d. The infected HEK 293A cells exhibited a significant CPE on day 14. The cells were collected and cracked by repeated freezing and thawing between 37°C and -80°C three times to release the viral particles. The recovered virus was inoculated into HEK 293A cells with a 90% fusion. The CPE was observed and recorded three days post-incubation, and median tissue culture infective dose (TCID50) was calculated using the Karber method. The four recombinant adenoviruses constructed in this study were named Ad-TAT-apoptin, Ad-RGD-MEL, and Ad-TAT-Apoptin-RGD-MEL. The viruses were then collected and stored at -80°C for future use.
2.3. Reverse transcription-polymerase chain reaction
To confirm successful transcription of the target protein, RNA was extracted from SMMC-7721 cells infected with recombinant adenovirus and then reverted to cDNA. Using cDNA as a template, TAT-apoptin and RGD-MEL were amplified by PCR for validation (TAKARA, Japan). The primers were designed using the gene sequences provided in the National Center for Biotechnology Information Gene Bank and synthesized by Beijing Aoko Biological Engineering Co., Ltd. The sequence of primers is shown in Table 1.
2.4. Western Blot
SMMC-7721 cells were seeded in 24-well plates, and various recombinant adenoviruses were added for 36 h. Cellular proteins were extracted from the cell lysate, and the protein concentration was determined. Subsequently, the proteins were separated by electrophoresis using a 20% separating gel. Polyvinylidene fluoride (PVDF) membranes were blocked for 2 h and then incubated overnight at 4°C with anti-rabbit monoclonal antibody against Flag (1:5000, Abcam, USA) and goat anti-mouse monoclonal antibody against MYC (1:5000, Abcam, USA) . After washing with phosphate buffered saline(PBS), the cells were detected with either an anti-goat IgG secondary antibody or an anti-mouse IgG secondary antibody (1:5000, ZEN BIO, China) and exposed using a gel imaging system.
2.5. Indirect immunofluorescence
SMMC-7721 cells were seeded into 24-well plates until they reached 70% confluence. Subsequently, various recombinant adenoviruses were separately added and incubated for 36 h. After fixation with 4% paraformaldehyde and permeabilization with 0.5% Triton X-100, the cells were treated with 5% Bovine Serum Albumin Solution (BSA) (Solarbio, China) for 60 min at room temperature to block non-specific binding sites. Cells were incubated with anti-rabbit monoclonal antibody Flag (1:200, Abcam, United States) and goat anti-mouse monoclonal antibody MYC (1:200, Abcam, United States) overnight at 4°C in a humidified chamber. After being washed with PBS, cells were incubated with an anti-goat IgG secondary antibody or an anti-mouse IgG secondary antibody (1:250, ZEN BIO, China) at 37°C for 2 h in the dark. Cells were imaged using a fluorescence microscope (Revolve, Echo-Labs, United States).
2.6. Cell proliferation assays
A cell proliferation reagent kit (Beyotime, China) was used to determine the cell proliferation capacity of various cell lines. Cells were seeded in 96-well plates with a density of 5 × 103 cells/well. 0–1000 multiplicity of infection (MOI) of different recombinant adenoviruses were treated, and cell viability was assessed at 24 h, 48 h, and 72 h according to the manufacturer's instructions and compared between the different groups.
2.7. Wound healing assay
Cells were seeded in a 6-well plate. When cells reached confluency, each well was scratched with a 200 μl pipette tip, creating three lines across each well. The cells were infected with 1000 MOI of recombinant adenovirus, and images were captured using a microscope (Echo Revolve, United States) at 0 h, 3 h, 6 h, 9 h, 12 h, and 24 h after treatment.
2.8. Transwell invasion and cell migration test
The Matrixgel thawed slowly on the ice and was diluted with a serum-free medium at a ratio of 1:8. Transwell chambers, which contained a polycarbonate membrane with 8.0 μm pores (Corning, United States), were placed in a 24-well plate. An amount of 200 μl of diluted Matrixgel was added to the transwell chamber and incubated at 37℃ for 2 h. Then, the residual medium was removed. The cell concentration was diluted with RPMI-1640 medium without FBS. Subsequently, 150 μl of cell suspension was added to each transwell chamber with the BD Matrigel Basement Membrance Matrix, and 600 μl of RPMI-1640 medium containing 10% FBS was added under the 24-well plate. The cells were then cultured in the incubator for 48 h. Then, the cells in the upper compartment were wiped with cotton swabs, fixed with methanol for 30 min, and stained with 0.1% crystal violet dye for 10 min. The membrane was removed, fixed on a slide, and randomly photographed under a microscope. In the cell migration experiment, all other conditions were identical to those in the invasion experiment, except for the absence of BD Matrigel Basement Membrance Matrix.
2.9. Scanning electron microscopy (SEM)
Cells grown on slides were washed with a PBS buffer and fixed with 2.5% glutaraldehyde at 4°C overnight. The sample was dehydrated using a gradient of ethanol concentrations (50%, 70%, 80%, 95%, and 100%). The sample was then sputter-coated with gold-palladium and imaged using a scanning electron microscope (Gemini 300, ZEISS, Germany).
2.10. Flow cytometry analysis
SMMC-7721 cells were infected with different recombinant adenoviruses. After 36 h of infection, each group of cells was digested with 0.25% trypsin. The digestion process was terminated by adding a culture medium, and the cells were washed twice with PBS. Cells were collected by centrifugation and suspended in 500 μl of binding buffer. An amount of 5 μl of Annexin APC and 5 μl of 7AAD (Annexin V-APC/7-AAD double-stained apoptosis detection kit, Key GEN Bio Tech, China) were added to the mixture, and cells from each group were incubated in the dark for 15 min. Uninfected SMMC-7721 cells were used as a blank control. The apoptosis rate was determined by flow cytometry (Verse, BD, United States).
2.11. Reactive oxygen species staining
The reactive oxygen species (ROS) was detected using a ROS assay kit (Key GEN Bio Tech, China) according to the manufacturer's protocol. The cells were collected and suspended in DCFH-DA. After incubation at 37℃ for 20 min, the cells were observed under a fluorescence microscope (Revolve, Echo-Labs, United States).
2.12. TdT-mediated dUTP nick end labeling
TdT-mediated dUTP nick end labeling (TUNEL) staining of SMMC-7721 cells began by seeding the cells on a 6-well plate and treating them with 1000 MOI recombinant adenovirus for 48 h. After the cells were fixed in 4% paraformaldehyde for 30 min, a 1% Triton X-100 permeable solution was promoted at room temperature for 3–5 min. The endogenous peroxidase-blocking solution was incubated at room temperature for 10 min. Terminal nucleotidyl transferase (TdT )enzyme reaction solution was added and incubated in the dark at 37℃ for 1 h, followed by the addition of Streptavidin-Horseradish Peroxidase working solution, which was also incubated in the dark at 37℃ for 30 min. The Diaminobenzidine (DAB) working solution was color-developed at room temperature for 0.5–5 min. After washing with PBS, the sample was observed under the microscope and photographed.
TUNEL staining of tumor tissues was performed by dewaxing tumor sections in water, washing with PBS, adding Proteinase K working solution, and incubating at 37℃ for 30 min. Equilibration buffer was added to the 1 × equilibration buffer and incubated at room temperature for 10–30 min. An amount of 50 μL of TdT solution was added to the slices, incubated at 37℃ for 1 h, and washed with PBS three times for 5 min each time. After DAPI staining, the film was sealed and observed under a fluorescence microscope.
2.13. Animal xenograft model
SMMC-7721 cells (1 × 107/100 μl) were injected subcutaneously into the right axilla of BALB/c nude mice (Charles River, Beijing, China). When the tumors grew to an average diameter of 5 mm, the animals were randomized into five groups and received intratumoral injections of either PBS (100μl), AdTA (2 × 108pfu/100μl), AdRD (2 × 108pfu/100μl), AdTARD (2 × 108pfu/100μl), or Cisplatin (DDP) (60μg/kg), respectively, every two days. The tumor size was measured with a Vernier caliper every two days. Tumor volume was calculated using the formula: V = length × width2 ÷ 2. All experiments were approved by the Ethics Committee of the Institute of Radiation Medicine, Chinese Academy of Medical Sciences. All manipulations were carried out in accordance with the requirements of the Regulations of the Experimental Animal Administration of China.
2.14. Hematoxylin-eosin staining
The samples were fixed with 10% formalin, dehydrated through a graded series of alcohol (50%, 70%, 80%, 95%, and 3 × 100%), embedded in paraffin, and cut at a thickness of 5 µm using a microtome. The slides were stained with hematoxylin and eosin (H&E). The HE-stained slides were visualized under a light microscope (Echo Revolve, United States) at 400× magnification. Cell nuclei in the HE stain appeared to be blue.
2.15. Statistical analyses
GraphPad Prism 6 (GraphPad, San Diego, United States) was used to generate figures. All quantitative experiments were performed in triplicate and/or repeated three times. Data were expressed as mean ± standard deviation (SD). The statistical significance between groups was determined by a t-test of variance. A value of P < 0.05 was considered statistically significant, while a value of P < 0.01 was considered highly statistically significant.