Mice
Experiments were performed in male C57BL/6 mice (age, 8 ± 0.2 weeks; weight, 28.2 ± 2 g) obtained from an in-house colony (Monash Animal Research Platform, Clayton Australia) where they were placed on a 12h light-dark cycle with ad libitum access to food and water.
DCAL
Transient global forebrain hypoxia (30 minutes) was induced using DCAL, as described previously[17]. Briefly, mice are anaesthetised and left carotid artery is exposed and a calibrated flow probe is placed around the artery to measure blood flow velocity. After 10 min, the right carotid artery is permanently sutured to block blood flow in the artery. The left carotid artery is then transiently clamped for a period of 30 min (and cessation of blood flow is confirmed), and reperfusion is triggered.
Treatment Administration
We had previously determined that VCAM-1 was significantly upregulated 3 hours[17]. We tested anti-VCAM-CD39 at various doses and determined that the optimum therapeutic dose was 0.125mg/kg, which we administered intravenously 3 hours post-surgery. The corresponding dose of the controls (non-targeted CD39; equi-active- 1.5 mg/kg; and anti-VCAM-inactive CD39- 0.5 mg/kg) was similarly administered. Mice were assigned a random sample number, and all mouse groups were blinded during subsequent assessment. All animals were left to recover on the heat pad for at least 4 hours after procedure. Animals were separated and given supportive treatment and left on the heat rack overnight[17].
Euthanasia and tissue harvesting
At 24 hours post-surgery, mice were anaesthetized with Lethabarb (Pentobarbitone, 90mg/kg, Australia), and transcardially perfused with phosphate buffered saline (PBS) pH 7.4. Unless otherwise stated, a 6mm section of the infarcted brains was dissected and homogenised to 300mg wet weight of tissue per 1ml of Lysis Buffer (10mM Hepes pH 7.4, 10% Sucrose, 2mM EDTA, 0.1% CHAPS, 5mM DTT, 10ug/ml Aprotinin).
Functional Assessment
Neurological assessment was done through Bederson scoring as described previously[17, 33] 20–24 hours post-surgery.
Magnetic resonance imaging
At 24 hours post-stroke, in-vivo MRI Imaging was performed using a 9.4 T/20 cm Bruker MRI with actively decoupled volume transmit and surface-receive coils as described previously[34]. Refer to supplementary methods for further information.
Caspase-3/7 activity assay
The fluorogenic substrate (N-Acetyl-Asp-Glu-Val-Asp-7-amido-4-trifluoromethylcoumarin (Ac-DEVD-AFC) was used to measure caspase-3/7 activity as previously described[17]. The injured (ipsilateral) and uninjured (contralateral) cortices were dissected and homogenized to 300mg wet weight of tissue per ml of Caspase lysis Buffer (10mM HEPES pH 7.4, 10% Sucrose, 2mM EDTA, 0.1% CHAPS, 5mM DTT, 10µg/ml Aprotinin). 10µL of lysate was diluted in 90µl of Caspase reaction Buffer (40mM HEPES pH 7.4, 200mM NaCl, 2mM EDTA, 0.2% CHAPS, 0.1% Sucrose, 3mM DTT) along with Fluorogenic Caspase-3 Substrate Ac-DEVD-AFC (Final concentration 13µM) in a black 96 well plate (Perkin Elmer, Australia). The reaction was allowed to take place at 37°C and the fluorescence generated by the release of the fluorogenic group AFC on cleavage by caspase 3 was measured kinetically every 2 min for 200 minutes (Ex 400 nm and Em505 nm) using a BMG FLUOstar Omega Microplate Reader (BMG Labtech, Australia).
Blood brain barrier permeability assay
Albumin content in the brain was determined using the Mouse Albumin ELISA Quantitation Set (Bethyl Laboratories, USA) according to the manufacturer’s instructions and as described[17, 35]. Albumin in the brain parenchyma is reflective of the extent of BBB damage as published[35]. Total protein was quantitated using the BCA protein assay (Pierce). The amount of albumin (ng) per microgram protein in each sample was calculated from the standard curve. Albumin extravasation was calculated as difference in albumin in the ipsilateral and contralateral cortex for each animal for mice.
Determination of plasma ATP and Adenosine levels
ATP and Adenosine levels in the plasma was determined as previously described[15].
Real-Time (RT)-PCR
Sections of ischemic brain tissue were dissected and kept in RNAlater (Thermo Fisher Scientific, Australia) for 24 hours before being stored at -80°c until use. For RNA extraction, tissues were homogenised in RLT lysis buffer (Qiagen, Hilden, Germany) and DNA-free RNA was prepared using RNeasy Mini Kit and DNase I set (Qiagen, Hilden, Germany) according to manufacturer’s protocols. Identical amounts of total RNA (1µg per sample) were reverse transcribed to generate cDNA and real-time PCR was performed as previously described[17].
Measurement of cytokine levels in plasma
25µL of plasma was analysed in duplicates using the LEGENDplex™ Mouse Inflammation Panel (BioLegend, United States) according to manufacturer’s instructions.
Oxygen Glucose deprivation (OGD) of Cells
To simulate HIBI, confluent monocultures of immortalised mouse brain endothelial cells (bEND3; ATCC, BSL1) were subjected to OGD. Confluent bEND3 cells seeded on a 12-well plate (7.5 x 104 cells per well) were washed once and equilibrated at 37°C before cells were subjected to oxygen glucose deprivation (OGD) in Stimulation media (DMEM in 0.5%FBS) for 6 hours before collection. anti-VCAM-CD39 (10µg/mL), ±adenosine receptor antagonist CGS-15943 (200nM) (Sigma Aldrich, Australia), was then added. Next, cells were transferred to a hypoxic chamber (Modular Incubator Chamber; Billups-Rotheburg, Del Mar, CA, USA) which was flushed (6 min) with 100% nitrogen. The hypoxic chamber was kept humidified at 37°C for the duration of the experiment (6 hours). Anaerobic conditions were confirmed with the Anaerotest strip (Merck Millipore, Germany).
Cell death assay
Necrotic cell death was assessed by the lactate dehydrogenase (LDH) assay. Media and lysates of cells were collected and the LDH assay was run according to manufacturer protocol (Roche, Australia).
Statistical analysis
was performed using Prism 9 software (GraphPad, US). Normality tests were run to determine subsequent statistical test. Confirming normality, comparison of experimental datasets was performed by one-way ANOVA with Dunnett’s post-hoc correction or two-way ANOVA with Sidak’s or Dunnett’s post-hoc correction as stated. Non-normal datasets were compared with Kruskal-Wallis test with Dunn’s multiple comparisons test. Differences between two groups were assessed by two-tailed student t-tests (unpaired or unpaired with Welch’s correction for parametric data and Mann-Whitney test for non-parametric data). P < 0.05 was considered significant.