In this work, we focused on the COVID-19 patients with Omicron variant strain at Shanghai Lingang Makeshift Hospital to explore the correlation between their symptoms and the time required for nucleic acid negativity. The results showed that symptoms of throat pain were often accompanied by a significantly prolonged negative time for COVID-19 nucleic acids, and there was a significant correlation between the two. Furthermore, the 7-day NNACR was significantly lower in patients presenting with both throat pain and diarrhea, underscoring the impact of different symptoms on the nucleic acid negative conversion timeline.
The global SARS-CoV-2 pandemic has presented significant challenges to human health. Nucleic acid detection is the primary method of diagnosing COVID-19 infection 8–12. The time of nucleic acid conversion to negative has become an important indicator of disease progression, patient recovery, and public health decision-making. This " time of nucleic acid conversion to negative" is defined as the interval from the first positive test to the first negative result. Research indicates that this period varies based on individual differences and disease severity, typically ranging from 1 to 3 weeks. However, various factors can affect this process, resulting in different lengths of time for nucleic acids to turn negative. Studies have found that the length of time for COVID-19 to become negative is closely related to the viral load, patient age, underlying diseases, health status, treatment measures, and living environment. Patients with a higher initial viral load usually take longer to clear the virus from the body18, thus prolonging the nucleic acid transition to a negative state. Older patients have relatively weak immune function, resulting in a slower virus clearance rate and a prolonged nucleic acid transition time. Children and young people generally recover faster with shorter nucleic acid transition times 7. Patients with chronic conditions like diabetes, hypertension, cardiovascular disease 7, or immune deficiencies tend to experience longer durations before achieving negative nucleic acid test results. The early use of antiviral drugs and effective symptomatic treatment can significantly shorten the negative nucleic acid transition time 22–25. The strength of an individual's immune system directly affects the viral clearance rate. An immune overreaction (such as a cytokine storm) may lead to a severe inflammatory response 17, prolonging the negative nucleic acid transition time. Additionally, good nutritional support, a healthy lifestyle, and vaccination are conducive to the normal functioning of the immune system 7, shortening the negative nucleic acid time. In clinical practice, developing a personalized treatment plan based on each patient's unique conditions is essential. This approach helps accelerate the negative conversion of nucleic acids, minimizes the risk of transmission, and ensures the health and well-being of the patient.
According to clinical observations and research, the symptoms of COVID-19 are diverse and show individual differences and complexities. This work focuses on the symptoms of COVID-19 patients to gain insight into the clinical manifestations and the COVID-19 characteristics. Respiratory symptoms are prevalent among COVID-19 patients, which include sore throat, headache, nasal congestion, runny nose, dry cough, dyspnea, and chest tightness. Additionally, digestive symptoms such as nausea, vomiting, and diarrhea are also relatively common 31–34. These symptoms may have resulted from an inflammatory response caused by a virus invading the intestine 35. Additionally, some patients with COVID-19 experience muscle soreness, fatigue, taste loss, abnormal taste, and excessive sweating. Previous studies have shown a correlation between fever, gastrointestinal symptoms, chest tightness, and negative nucleic acid transition time in patients 27–28.
Fever is the predominant symptom observed in patients with SARS-CoV-2 36,37. Studies have indicated that fever might serve as a clinical marker for poor prognosis, as it is associated with the release of inflammatory mediators by the body during febrile episodes 38,39. These inflammatory mediators can induce tissue damage and organ dysfunction by promoting the production of toxic oxygen derivatives. This suggests that individuals infected with SARS-CoV-2 who experience fever may have an extended time to achieve negative nucleic acid test results 40,41. Several studies have discovered that the angiotensin-converting enzyme 2 (ACE2), the receptor for SARS-CoV-2, is present in both the upper and lower gastrointestinal tracts, with expression levels nearly 100 times higher than those in respiratory organs 42,43. Patients exhibiting digestive symptoms often have higher concentrations of intestinal viruses 44, which can lead to damage to the intestinal mucosa. Ya Yang et al27 observed that digestive symptoms, including nausea and diarrhea, were associated with an extended duration of nucleic acid conversion to negative in COVID-19 patients.
This study showed that throat pain symptoms often experience a significantly prolonged negative time for COVID-19 nucleic acid transition, and there is a significant correlation between the two. Additionally, patients with throat pain and diarrhea had a significantly lower rate of negative transformation 7 days after COVID-19. Throat pain commonly arises from the release of inflammatory mediators in the airway triggered by SARS-CoV-2 infection, which impacts the sensory nerves in the throat tissue 45. This indicates more severe upper respiratory tract inflammation 46,47 and slower disease recovery. Moreover, The symptom of throat pain can impact a patient’s ability to eat and rest properly, potentially compromising their immune system’s effectiveness against the virus. This could account for the observation that COVID-19 patients experiencing throat pain symptoms often require a longer time to achieve a negative nucleic acid test result. Additionally, diarrhea is a frequently observed symptom in COVID-19 infections. Its occurrence indicates that the virus not only affects the respiratory system but may also invade the digestive tract 35, increasing the complexity and scope of the infection and thus prolonging the negative nucleic acid time. Diarrhea can lead to fluid and electrolyte imbalances and intestinal flora disorders, weakening the immune system's function and reducing the body's efficiency in fighting viruses. This condition is often accompanied by diarrhea, which may further reduce the body's natural immune defenses. Therefore, it usually takes longer for COVID-19 patients with diarrheal symptoms to achieve a negative nucleic acid transition. Treating patients with throat pain and diarrhea may be an effective strategy to accelerate the negative nucleic acid transformation process in COVID-19 patients. Therefore, in clinical practice, it is crucial to closely monitor and intervene in patients' symptoms, particularly those that have a significant impact on the time it takes for nucleic acid tests to return negative. Effective treatment measures should be taken to improve patients' cure rate and recovery speed.
This study had limitations. First, it was conducted during an outbreak primarily driven by the Omicron BA.5.2 variant of the coronavirus, which means the research focused exclusively on this specific strain. Consequently, the effects of other COVID-19 variants on clinical symptoms and outcomes are not addressed by this study. Second, only asymptomatic and mild patients were admitted to the Shanghai Lingang Makeshift Hospital, while ordinary and severe patients were treated in designated hospitals. Therefore, we could not evaluate the correlation between clinical symptoms and nucleic acid-negative times in normal and severely ill patients. Third, due to the retrospective observational study design, our inferences may be prone to residual confounding bias.
Future research should include clinical trials focusing on various COVID-19 strains, involving larger sample sizes, extended time periods, and multiple geographic regions. These studies could offer deeper insights into how clinical symptoms influence the negative conversion of COVID-19 nucleic acids, thereby providing a more comprehensive reference and guidance for the diagnosis and treatment of COVID-19 patients.