The thymic microenvironment plays a key role in T cell development [10, 11]. This specialised environment ensures the proper differentiation and selection of T lymphocytes, thus securing their functionality in the immune system. This is vital for developing a strong adaptive immune response against pathogens and tumors without causing autoimmune disease [11].
The thymus is highly sensitive to various environmental factors, particularly radiation and chemical agents. For example, hematopoietic stem cell transplantation (HSCT) can acutely damage the thymus due to the application of chemotherapy, radiotherapy, and antibody therapies [12]. This can be further exacerbated by infections that an immunodeficient patient may acquire, and in the case of allogeneic HSCT, thymic graft-versus-host disease (GVHD) [13, 14]. However, after the acute damage subsides, the thymus has the capacity for intrinsic regeneration, though this process is hindered by the natural involution of the thymus.
Thymic epithelial cells (TECs) are crucial for T cell development, but the cellular mechanisms that maintain TECs in adults are still poorly understood. Most of the supporting tissue of the thymus consists of epithelial cells that form a unique cytoreticulum [15]. This cytoreticulum is inhabited by blast lymphocytes derived from the bone marrow. When these cells (T lymphocyte precursors) reach the thymus, their immunological education begins. Thymic epithelial cells can be classified into different populations that vary in distribution, structure, function, and their ability to synthesise thymic hormones such as thymulin, thymopoietin, thymosin, and thymic humoral factor [16]. These cells play a key role in regulating the maturation of lymphoid progenitors and immune responses. Morphologically, thymic epithelial cells can be divided into two main subtypes—cortical (cTEC) and medullary (mTEC) [17]—both of which are essential for the development of the T cell repertoire. Immunohistochemically, thymic epithelial cells can be classified into four subtypes: subcapsular, cortical, medullary, and Hassall’s corpuscles, each with a specific role in the organisation of the thymus and its immune function [18]. Strong evidence suggests that during fetal development and in the perinatal thymus, there is a bipotent progenitor that can generate both cTECs (cortical thymic epithelial cells) and mTECs (medullary thymic epithelial cells) [19].
In this study, the presence of epithelial cells was demonstrated by staining with Monoclonal Mouse p63. This antigen is predominantly expressed in thymic epithelial cells, especially in cortical epithelial cells (cTEC) [20]. The postnatal thymic cortex contains several distinct microenvironments, including the subcapsular region, central cortex, and perimedullary cortex [21]. Staining with monoclonal antibodies, microscopic morphology, and location within the thymic cortex revealed at least four different subtypes of cortical thymic epithelial cells (cTEC) [22]. However, the functional distinction between these four cTEC subtypes remains unclear. A global gene expression analysis of the subcapsular region, central cortex, and perimedullary cortex showed variability in gene expression profiles across these regions [21, 23]. These cells play a crucial role in T lymphocyte maturation, where p63 contributes to their development and maintenance. One isoform of p63, ΔNp63, is particularly important for the proliferation and differentiation of thymic epithelial cells, which are key to the proper development and function of the thymus [24]. These cells are essential for the positive selection of T lymphocytes during their maturation in the thymus. Specifically, ΔNp63 aids in the proliferation and differentiation of epithelial progenitor cells in the thymus, which is vital for maintaining the structural integrity and function of this organ [20, 25].
The role of ΔNp63 has been investigated in the context of its regulation of signaling pathways such as FgfR2 and Jag2, which are critical for proper thymic epithelial formation [25]. Disruptions in this regulation can lead to reduced epithelial cell proliferation, negatively impacting T cell development and resulting in decreased thymic functionality, especially in mice with experimental models that exclude ΔNp63 [26]. Additionally, studies have shown that ΔNp63 influences the long-term maintenance of thymic epithelial cells, enabling the creation of an appropriate microenvironment for T lymphocytes, which is crucial for a normal immune response [21, 26]. Furthermore, cTECs express various self-antigens that are presented via major histocompatibility complex (MHC) molecules. These antigens also play a significant role in the positive selection of T cells, a process that determines the diversity of the T cell repertoire [27].
Lymphoid progenitor cells enter the postnatal thymus via blood vessels, typically localised around the corticomedullary junction. Upon entering the thymus, lymphoid progenitor cells, or immature CD4-CD8 double-negative thymocytes, migrate to the subcapsular region of the thymic cortex, where they begin to proliferate and differentiate into T-lineage cells [21]. This is why p63 + cells are most abundant in this region, as confirmed in our study through qualitative data analysis.
Although it is known that cTEC cells belong to endodermal epithelial cells and are neither lymphoid nor hematopoietic, cTEC cells are a crucial component of the adaptive immune system because they express molecules, including b5t and MHC class II, whose functions are primarily significant in the adaptive immune system and whose expression is detectable only in vertebrates with adaptive immunity [21, 28].
While cTECs are responsible for positive selection during T lymphocyte maturation, medullary epithelial cells (mTECs) are responsible for negative selection during T lymphocyte development. Thymic epithelial cells, particularly mTECs, play a key role in the three-dimensional organisation of the thymus structure [29]. This three-dimensional network allows for proper T lymphocyte selection, which is crucial for maintaining central immune tolerance and preventing autoimmune diseases. mTECs express a wide range of tissue-specific antigens (TRAs) that facilitate the negative selection of autoreactive T lymphocytes. mTECs express a different set of self-antigens that enable the elimination (negative selection) of autoreactive T cells that bind to these antigens with high affinity, thereby establishing central tolerance [27, 30]. Additionally, the self-antigens expressed by mTECs regulate the production of regulatory T cells (Tregs), which suppress immune responses in peripheral tissues, a process known as peripheral tolerance [27, 31].
In this study, the analysis of epithelial cell density revealed that their density decreases during fetal development. A greater number of epithelial cells are present in the thymic medulla and in the subcapsular region. Research by Wang and colleagues shows that during fetal thymic development, the number of epithelial cells significantly increases as the organ matures and forms the structure necessary for T lymphocyte development [20]. In the early stages of development, cortical epithelial cells (cTECs) dominate, while medullary epithelial cells (mTECs) appear later and become key for negative lymphocyte selection [20]. However, our study assessed epithelial cell density, which showed that epithelial cell density decreases during fetal development. This decrease can be explained by the faster growth of thymic tissue compared to the rate of epithelial cell division. Our results suggest that the rapid growth of thymic tissue outpaces the proliferation rate of epithelial cells, resulting in lower epithelial cell density in the later stages of fetal development.
Hassall's corpuscles (HC) (also known as thymic corpuscles) are specific structures found in the thymic medulla and are formed by type VI epithelial cells, which are arranged concentrically [32]. HCs are unique, antigen-specific, functionally active, multicellular components of the non-lymphocytic cellular microenvironment of the thymic medulla and are involved in the physiological activities of both prenatal and adult thymus, crucial for thymus function and immune regulation [33]. Although the function of Hassall's corpuscles is not completely understood, it is known that they produce cytokines, which contribute to the maturation of dendritic cells and the induction of regulatory T cells, important for maintaining immune tolerance [34]. Recent research has revealed that these corpuscles may play a role in the pathogenesis of various autoimmune diseases, such as type 1 diabetes, rheumatoid arthritis, and multiple sclerosis [34, 35]. It has also been found that they synthesise chemokines that affect other cells in the thymic medulla, but the relationships between Hassall's corpuscles and other thymic cells (such as dendritic and neuroendocrine cells) have not yet been fully explored [34]. Some studies suggest that Hassall's corpuscles participate in the negative selection of lymphocytes, the removal of autoreactive T lymphocytes, and the production and storage of antibodies and antigens [5].
During thymic ontogeny, HCs appear when lymphopoiesis is already established, and the cortex, medulla, and corticomedullary junction become capable of conducting positive and negative selection of T lymphocytes, which undergo progressive maturation [33]. HCs are structurally organised from reticular epithelial (RE) cells with lamellar keratinisation, which usually undergo hypertrophy before becoming part of the outer layer of corpuscle cells [36]. Observations by Bodey et al. showed that the greatest developmental progress and primary organisation of HCs occur between the 45th and 54th days of gestation in dogs and between the 6th and 10th lunar months in humans [33].
In this study, histological analysis of a sample from the 14th gestational week (GW) revealed only one Hassall's corpuscle. This finding aligns with previous studies that showed no HCs appeared in the 12th GW, with the first corpuscle observed between the 12th and 14th GW, and after this period, the number and diameter of the corpuscles increased during fetal development [37]. Our research also indicates that the average areas of Hassall's corpuscles significantly increase with fetal age, as confirmed by a 2022 study, in which the largest difference was observed between the 16–19 week age group and the 20–23 week group [32]. Another study found that the number and size of Hassall's corpuscles increased between the 17th and 24th weeks [38]. In our study, the largest increase in HC area was recorded between the 19th and 28th gestational weeks. Additionally, it was found that the number of HCs gradually increases during fetal development, with the most intense increase occurring between the 29th and 38th GWs. These results suggest the continuous development and growth of Hassall's corpuscles as the fetus approaches the later stages of gestation.
Nearly all thymocytes (95–97%) are removed through apoptosis during T cell development in the thymus [39]. Macrophages play the role of "cleaners," removing many thymocytes that undergo apoptosis due to failure in positive selection or as a result of negative selection [40]. These cells are important for the efficient phagocytosis of dead thymocytes, as well as for supporting the immune microenvironment in T cell development [6, 41]. Additionally, thymic macrophages play a significant role in tissue repair, especially after injuries such as radiation, which is applied in some oncology patients. They secrete cytokines, growth factors, and other molecules that promote epithelial regeneration and maintain thymic structure after injury [6, 42].
For many years, thymic macrophages were not well- characterised or understood due to technical limitations in analysing these cells and conducting functional studies. There are only a few well-known macrophage markers identified on thymic macrophages (ED1 and ED2 in rats, CD68, F4/80, and CD11b in mice), making it difficult to study the origin of these macrophages and identify their heterogeneity in the thymus [43, 44]. Macrophages in the fetal thymus originate from various hematopoietic progenitors. Some derive from the yolk sac and fetal liver, while others come from bone marrow progenitors. Studies show that different populations of thymic macrophages develop at different stages of the fetus, with each having a specific function in the organisation and development of the thymus [45]. Thymic macrophages predominantly come from two populations: Timd4 + cells, of embryonic origin, located in the thymic cortex, and Cx3cr1 + cells, derived from adult hematopoietic progenitors, located in the medulla [45]. Since macrophages are recruited from different sources, including hematopoietic progenitors from the fetal liver and yolk sac, their number significantly increases during fetal development [45]. As the thymus becomes more active during fetal development, its volume increases, as does the number of apoptotic thymocytes, leading to an increase in macrophage density. Our study shows similar results. During the fetal period, macrophage density continuously rises until the end of fetal development, with a higher macrophage density observed in the thymic medulla. These findings confirm the role of macrophages in eliminating apoptotic cells and supporting thymic immune function during development.
The limitations of this study include a relatively small sample size, which may limit the generalisability of the results to a broader population. The study is retrospective in nature, and it depends on the quality and availability of previously collected samples and documentation, which may introduce certain biases. The samples were collected exclusively during standard fetal autopsies, so the quality of the samples may vary. Finally, the study did not consider possible additional factors such as fetal sex or health status, which could have influenced the results.
Further research on the thymus is needed as its microenvironment plays a crucial role in generating functional cellular immunity. Disruptions in this environment can impair T lymphocyte education and weaken the adaptive immune response, increasing the risk of autoimmune diseases. While thymic involution is often associated with aging, new data suggest the influence of sex hormones, obesity, infections, and oxidative stress [46]. Studies have also shown that thymectomy in adults can lead to an increased risk of cancer and reduced immunity, highlighting the importance of preserving the thymus [47, 48].