Due to the great increase in the non-thermal plasma (NTP) bio-applications, especially thanks to its antimicrobial properties, many types of NTP generating devices have been developed recently. However, a comparison of these devices is difficult due to the differences in the setup of studies testing them, e.g., in species of microorganisms used and sample preparations. In this study, we propose a unified protocol and use it to compare seven different NTP generating devices in terms of technical parameters and sporicidal properties. To our knowledge, a comparative study of this extent has not been published to date. For this purpose, we optimized a robust and reproducible standard protocol using Bacillus subtilis spores. Inhibition zones determined using the Aurora software and the complete inhibition of bacteria growth induced by the NTP treatment were analyzed to determine both local and overall effects, respectively. The presented protocol is based on an established bacterial method and can therefore serve as a general standard for an effective comparison of NTP sources across laboratories worldwide.