Preparation of Nutrient-Enriched Probiotic Feed
The probiotic functional diet, designed to provide essential nutrients for juvenile tilapia, utilized feed materials sourced from CP Aquaculture (India) Pvt Ltd at 104, GNT Road, Nallur, Red Hills, Chennai, Tamil Nadu, India. The materials underwent crushing and sieving before meticulous blending. Dried ingredients were thoroughly mixed before the addition of liquid components. Employing a feed processing machine, the feed was produced, cut into appropriate sizes, and subjected to a two-hour oven-drying at 60°C. After cooling, the feed was sealed in plastic bags for storage until required (Table 1).
Table 1
PFF nutritional preparation and organic composition (g/kg).
Ingredients | CPF1 | PFF2 | PFF3 | PFF4 |
Soybean meal | 448 | 448 | 448 | 448 |
Yellow corn | 170 | 170 | 170 | 170 |
Corn gluten | 60 | 60 | 60 | 60 |
Rice bran | 100 | 100 | 100 | 100 |
Wheat bran | 150 | 150 | 150 | 150 |
Fish meal | 40 | 40 | 40 | 40 |
Soya oil | 1 | 1 | 1 | 1 |
Fish oil | 1 | 1 | 1 | 1 |
Vitamin C | 5 | 5 | 5 | 5 |
Vitamin & Mineral mix | 25 | 25 | 25 | 25 |
Chemical analysis (g/kg) |
Dry matter | 895.3 | 895.3 | 895.3 | 895.3 |
Crude Protein | 293.2 | 293.2 | 293.2 | 293.2 |
Crude Lipid | 60.6 | 60.6 | 60.6 | 60.6 |
Fiber | 257 | 257 | 257 | 257 |
Ash | 50.7 | 50.7 | 50.7 | 50.7 |
200g of Rossellomorea marisflavi sp. (DAS-SCF02) | 0 | 1×104 | 0 | 0 |
200g of Agrococcus sp. (RKDAS1) | 0 | 0 | 1×106 | 0 |
200 + 200g of Dual strain mix (Rossellomorea marisflavi sp. (DAS-SCF02) + Agrococcus sp. (RKDAS1) | 0 | 0 | 0 | 1×107 |
Probiotics culture preparation
The probiotics were derived from two novel strains of bacteria: Agrococcus spp. RKDAS1 and Rossellomorea marisflavi spp. DAS-SCF02, which were isolated from Indian Snakehead fish (Channa straiata) in freshwater lakes and the Tamiraparani River at Tirunelveli, and sludge from the Muttukadu boat house in Kanchipuram, Tamil Nadu. Isolates of Agrococcus spp. RKDAS1 and Rossellomorea marisflavi spp. DAS-SCF02 were cultivated for a full day in NB (nutrient broth) to produce the probiotic cultures. The probiotic cells were centrifuged, cleaned, and suspended in 0.85% saline solution. Using a spectrophotometer, their concentrations were then adjusted to an absorbance OD of 600. Then, the washed probiotic strain suspensions were added to the basal feeds in a ratio of 20: 100 (w/w) between probiotic strain suspensions and basal supplementations for sustaining probiotics viability [25, 26].
Experimental Grouping and Preparation of Probiotic-Enriched Feeds
The study involved the production of four distinct feed types: Probiotic feeds PFF2, PFF3, and PFF4 incorporated probiotic isolates, namely Agrococcus spp. RKDAS1 and Rossellomorea marisflavi spp. DAS-SCF02, along with dual probiotic strains mix containing Rossellomorea marisflavi spp. DAS-SCF02 and Agrococcus spp. RKDAS1, respectively. The control feed (CF1) served as the baseline without probiotic additives. Each experimental group consisted of three replicates, with each tank accommodating ten tilapia fish. The base feed underwent autoclaving, and subsequent blending with the prepared probiotic culture was followed by serial dilution with a 0.85% sterile saline solution to quantify the probiotic concentration in the feed. To enumerate viable probiotics, 100 µL samples from specified dilutions were cultured on nutrient agar plates and incubated for 24 hours. After preparation, all feeds were stored under refrigeration to maintain the probiotic dosage integrity [27].
Experimental design
Fish collection
Juvenile Oreochromis niloticus was obtained from the Freshwater Aquaculture Sector of the University of Fisheries, weighing 2.56 ± 1.26 g. Before the experiment, the general health of each animal was evaluated based on its swimming ability in the tank, regular feeding patterns, the absence of blemishes, the presence of undamaged and vibrant scales, the absence of protruding eyes, and the integrity of fins without tears or ragged edges
Feeding Practices and Maintenance Protocols in a Juvenile Fish Study
As part of Probiotic functional feed (PFF) trial, the fish were hand-fed a basal diet twice a day after being placed into ten twenty/100-L plastic tanks. They underwent a seven-day acclimatization phase to adapt to the experimental environment. The experiment divided into four groups, CPF-1 (control group, diet included solely of basal fish feed), the 20% of PFF2 (Rossellomorea marisflavi sp. (DAS-SCF02–1×104), PFF3 (Agrococcus sp. (RKDAS1-1×106), and PFF4- (DAS-SCF02–1×104 + RKDAS1 (1×107) respectively, were equally distributed among each treatment group. Each tank housed twenty juvenile fish in static water, with a routine refresh of approximately half the water volume through a flow-through aquarium system and clearing of accumulated excrement was conducted. The probiotics functional feeds (PFF2, PFF3, and PFF4) were administered for eight weeks, providing the animals with 3% of their daily feed allocation in three meals at 9:00, 15:00, and 21:00 [28].
Comprehensive Assessment of Hematological, Biochemical, and Environmental Parameters in Tilapia during Long-Term PFF Supplementation
At 20-days intervals, various hematological and biochemical indices were assayed, including total albumin, globulin, hemoglobin (Hb), albumin–globulin ratio, total serum protein, total leukocyte count (TLC), total erythrocyte count (TEC), acetylcholine esterase (AChE), alanine aminotransferase (ALT), lactate dehydrogenase (LDH), aspartate aminotransferase (AST), and total adenosine triphosphatase (ATPase). The water quality was maintained within acceptable limits, and environmental indices such as dissolved oxygen (O2), pH, ammonia, and nitrite were assessed using readily available kits (Water Quality Test Kit - HI3817) during the investigation. The water temperature was maintained between 28 and 29°C.
Hemato-biochemical indices assessment
In order to collect plasma and perform enzyme assays, the fish were anesthetized with 100 mg/L of 3-aminobenzoic acid ethyl ester (MS-222, Sigma-Aldrich, St. Louis, MO, USA) on days 20, 40, and 60 of the experiment. The first portion of the blood sample was obtained using an anticoagulant 10% ethylene diamine tetra acetate (EDTA) to estimate the hematocrit (Htc) and white blood cells (WBCs). To harvest plasma samples, five fish from each treatment duplicate were euthanized. Tissue homogenization was carried out in a cold sucrose buffer (0.25 M) using a Teflon-coated mechanical tissue homogenizer (Remi, India), the samples were centrifugation for 10 minutes at 5000 g at 4°C followed by lysis. The enzyme activity was assessed using the supernatant obtained as the enzyme resource. All steps of the enzyme synthesis process were conducted in a refrigerated environment, with sample dilution performed where necessary.
For blood extraction, a sterilized 2-milliliter BD syringe cleaned with EDTA buffer (2.7%) was utilized. Blood was drawn into small glass vials containing 20 µl of EDTA buffer (2.7%) as an anticoagulant.
The TEC and TLC were determined according to the method outlined by [29]. A hemocytometer (Feinoptik, Germany) was employed for cell counting, with results reported as follows:
\(\:RBC\:Count=\:\frac{NrX\text{10,000}}{{mm}^{3}}\)\(\:WBC\:Count=\:\frac{500}{{mm}^{3}}\)
Here, Nr represents the total number of RBC measured in each square of the hemocytometer, and Nw indicates the total amount of WBC determined in each square. The factor acquired after accounting for the initial dilution factors is 10,000.
The blood Hb content was determined using Darbkins fluid and the Cyanmethemoglobin technique with a commercial kit (Qualigens, Mumbai, India).
Hematic indices
The blood collection procedure involved using a 2 mL BD sterilized syringe with 0.2 mL of anticoagulant, drawing blood from the caudal part of the fingerling fish, and transferring it to a fresh 1.5 mL Eppendorf centrifuge tube. The blood was permitted to clot for 45 minutes at room temperature with the tube tilted, followed by a 30-minute incubation at 4°C. Subsequently, the tube was centrifuged for 10 minutes at 3000g at 4°C. Blood plasma was then collected in sterile Eppendorf centrifuge tubes and analyzed using Qualigens diagnostic kits in a semi-automated analyzer (AR 601, Qualigens, Mumbai, India) for various serum indices. The examined serum indices included LDL, HDL, triglyceride, albumin (using the bromocresol green binding method) (ALB), cholesterol (CHO), and total serum protein (using the biuret method employing biuret reagent and buffered dye reagent). Globulin - albumin ratios were calculated by dividing albumin concentration by globulin content, and globulin content by albumin concentration.
Immunological evaluates
Lysozyme activity
Lysozyme performance was evaluated with slight modifications following the procedure outlined by Parry et al., 1965 [30]. In brief, a 96-well microplate was filled in triplicate with 25 µL of plasma. Subsequently, each well received 0.2 mg mL− 1 of Micrococcus lysodeikticus solution in a buffered sodium phosphate solution (pH 6.2), totaling 175 µL. The reaction was monitored using a spectrophotometer set to measure reactions at 540 nm, with readings taken and recorded every minute for ten minutes. The blood activity of lysozyme was quantified as a 0.001 min− 1 reduction at 540 nm and reported in units of mL− 1.
Intracellular superoxide anion (SOA)
The assessment of intracellular superoxide anion (SOA) and respiratory burst activity involved conducting NBT (nitroblue tetrazolium) reduction reactions, adapted from the Secombes method (Secombes, 1990). In brief, microplates (96-well) were utilized to contain three batches of WBCs (6 × 10^6 cells). To each well, 25µL of NBT was added, and the plates were protected at room temperature for two hours. After the incubation, 150µL of absolute methanol was introduced to each well, and the residual fluid was discarded. Subsequently, the wells underwent repeated cleaning with a 70% methanol solution. Finally, 100µL of DMSO and 150µL of 2M KOH were added to each well. Following thorough mixing, the absorbance value, indicative of the reaction, was measured at 540 nm using a UV-Vis spectrophotometer (201/220, Thermo Scientific).
Production of reactive nitrogen species (RNS) analysis
The Griess reagent technique, which is related to the change of nitrite from nitric oxide, was used to assess the nitric oxide (NO) in the plasma of tilapia [31]. Using a conventional curve representing the level of nitrate in the serum of tilapia, the amount of nitrite present was determined.
MPO (myeloperoxidase)
The MPO activity in plasma was assessed using [32]. An absorption change was considered to be one unit, and the activity was represented as U mg plasma− 1.
Immune-related gene expression
Isolation of RNA and cDNA Construction
For total RNA isolations, liver samples were dissected from three animals per treatment group. A concentration of 20 ng µL− 1 was targeted for liver RNA. Total RNA was isolated using a commercial Kit (RNA mini kit, Cat No. 74,104, Qiagen, Germany) according to the manufacturer's guidelines. The purity of the RNA was assessed through gel electrophoresis (1.2% agarose gel) and NanoDrop spectrophotometry (NanoDrop 2000, Thermo Scientific). Subsequently, cDNA synthesis was performed using a cDNA RT Kit (Applied Biosystems, Cat# no. 4368813, USA), adhering to the manufacturer's instructions.
Quantitative (qPCR) RT-PCR examination
Quantitative RT-PCR analysis was conducted using the Applied Biosystems 96 Real-time qPCR System, USA, to assess the expression of genes, including β-actin household genes, hsp70, IL-1β, IC3, TNF-α, IFN-γ, GF1, GH, IL-1, and Lyz. The DNA primer sequences used for amplification are presented in Table 2. The SYBR green technique with the SensiFast SYBR Lo-Rox kit (Bioline) was employed for RT-PCR. Amplification conditions consisted of 45 cycles: 10 seconds at 95°C, 30 seconds at 63°C, and 30 seconds at 72°C. Subsequently, the 2−∆∆CT method was applied to determine the relative expression levels of the target genes.
Table 2
List of primers employed to quantify immune relative gene expression.
Gene | Sequence (5′-3′) | GB. Accession No. | Annealing Temp. (°C) | R2 | Efficiency (%) | A. size (bp) |
β-actin | F:CAGCAAGCAGGAGTACGATGAG R: TGTGTGGTGTGTGGTTGTTTTG | XM_003455949.2 | 62 | 0.994 | 19.2 | 136 |
Interleukin-1β (IL-1β) | F:CAAGGATGACGACAAGCCAACC R: AGCGGACAGACATGAGAGTGC | XM_019365844.2 | 60 | 0.991 | 96.66 | 149 |
Interleukin-IL1 | F:CTGTGAAGGCATGGGTGTGGAG R:TCGCAGTGGGAGTTGGGAAG | NM_001279704.1 | 60 | 0.979 | 96.49 | 111 |
complement component (IC3) | F: GGTGTGGATGCACCTGAGAA R: GGGAAATCGGTACTTGGCCT | XM_013274267.2 | 60 | 0.998 | 97.22 | 196 |
Heat shock protein 70 (Hsp70) | F: CATCGCCTACGGTCTGGACAA R: TGCCGTCTTCAATGGTCAGGAT | FJ207463.1 | 62 | 0.995 | 99.15 | 238 |
Tumor necrosis factor- α (TNF-α) | F:AAGCCAAGGCAGCCATCCAT R:TTGACCATTCCTCCACTCCAGA | NM_001279533.1 | 58 | 0.993 | 98.67 | 184 |
Interferon (IFN-γ) | F: TGGGTGGTGTTTTGGAGTCG R: TAGCGAGCCTGAGTTGTTGG | NM_001287402.1 | 60 | 0.998 | 99.54 | 138 |
Growth factor (GF1) | F-AAGGGAAGCAGCAGCAGTTGTG R-CGTCCATGCCGTTAGCCTTGAG | NM_001279708.4 | 58 | 0.989 | 98.96 | 151 |
Growth hormone (GH) | F:ACATCATCAGCCCGATCGAC R:TCAGCAGCAAGATTCCCGTT | XM_003442542.5 | 62 | 0.994 | 98.38 | 183 |
Lysozyme (Lyz) | F-AGGGAAGCAGCAGCAGTTGTG R-CGTCCATGCCGTTAGCCTTGAG | XM_003460550.2 | 60 | 0.997 | 94.98 | 107 |
F: forward; R: Reverse; GB: Gene bank; Temp: Temperature |
Vibrio challenge
The Vibrio strains of V. harveyi and V. parahaemolyticus were isolated from the infected Tilapia fish at Ramayanpatti, in the Tamil Nadu district of Tirunelveli, India. The conventional morphological, biochemical, and pathogenicity assays identified the Vibrio bacterial isolates. The isolates were pre-enriched with an alkaline peptone solution (APS) before being diluted in conventional saline (0.85% NaCl w/v). Each isolate was surface dispersed on three agar media: TCBS (thiosulphate citrate bile salt sucrose agar), SWC (seawater complex agar), and Vibrio specific agar medium (VSAM). A dark room at 30°C was the perfect temperature for finding bio-luminous colonies on SWC agar. The Vibrio isolates were compared to strains of V. harveyi (MTCC 3438) and V. parahaemolyticus (MTCC 443) as positive and negative controls, respectively, and then further confirmed by PCR. The PCR confirmed Vibrio isolates were used in this study. To prepare separately fresh V. harveyi and V. parahaemolyticus, a single colony of Vibrio was inoculated into Nutrient Broth with 2% of NaCl and cultured for 24 h at 30°C. Cell harvesting was performed by centrifuge at 5,000 rpm and 4°C for 10 minutes, after that three washing and re-suspending of the cells in a 0.85% saline buffer. The suspension of V. harveyi and V. parahaemolyticus was modified to 106 CFU/ml with 0.85% saline buffer before injection. After the feeding trial, ten fish from each group were randomly selected and intraperitoneally injected with 0.1 ml of V. harveyi and V. parahaemolyticus (106 CFU/ml) based on the procedure outlined by Fatima et al., 2022 [33].
Statistical analyses
To assess variances among treatments, we employed an ANOVA (one-way analysis of variance) along with the Duncan multiple range test. A significance level of 0.05 was set for the analyses. The standard deviation was calculated using a similar approach.