Patients and breast tumors
The study included 126 breast tissue samples from 89 patients who were retrospectively identified to have undergone benign tumorectomy (63 samples), or lumpectomy or mastectomy for primary breast cancer without neoadjuvant systemic therapy (63 samples) at Osaka University Hospital between March 2022 and January 2024 (Table 1). Two benign tumors were resected in one patient, and three benign tumors were resected at the same time as mastectomy for breast cancer. Thirty-three normal breast gland tissue samples were obtained from distant breast tissue in the patients with breast cancer who underwent mastectomy. In total, FNAB examinations were performed for 126 breast tissue samples (63 breast cancers, 30 benign breast tumors, and 33 normal breast glands) and subjected to both the CTS assay and PAP staining. The breast tissues were fixed in 10% buffered formalin, embedded in paraffin, and diagnosed by histopathological examination of permanent sections (PS analysis).
Reagents
Four micrograms of the CTS probe were dissolved in 1 µL of dimethyl sulfoxide. Next, 4 µL of Hoechst 33342 dye (Dojindo, Kumamoto, Japan), 4 µL of Hoechst 33258 dye (Dojindo), and 490 µL of phosphate-buffered saline were added to create a CTS probe solution with a final concentration of 12 µM. For each analysis, 25 µL of the CTS probe was combined with 25 µL of encapsulating agent and placed on a glass slide. ProLong Live Antifade Reagent (Thermo Fisher Scientific, Fresno, CA, USA).
Synthesis of the CTS probe
The CTS probe was synthesized using a method that has been reported elsewhere [16]. First, 5(6)-TAMRA-succinimidyl ester (101.8 mg, 0.193 mmol, 1.0 eq) was added to 2,6-diisopropyl-4-aminomethyl aniline (39.8 mg, 0.193 mmol, 1.0 eq) in dimethylformamide (2.0 mL). The reaction mixture was then stirred under a nitrogen atmosphere for 24 hours. The resulting solution was concentrated to dryness under reduced pressure to give the precursor CTS as a black-purple crude compound (Supplementary Fig. 1). ESI-HRMS m/z calcd for C38H43N4O4 ([M+H]+) 619.3279, found 619.3275.
The crude compound was then dissolved in acetic acid and water in a ratio of 9 to 1 (2.0 mL). Next, sodium nitrite (41.4 mg, 0.600 mmol, 3.11 eq) and sodium azide (36.7 mg, 0.565 mmol, 2.93 eq) were slowly added to the solution at 0°C. After stirring for 30 min, the solution was concentrated to dryness under reduced pressure. The mixture was purified by reversed-phase high-pressure liquid chromatography (RP-HPLC) to give the second-generation CTS probe (in TFA salt form) as a dark purple solid (92.8 mg, 64% in two steps). The RP-HPLC conditions were as follows: column, Cosmosil 5C18-AR300 (Nacalai Tesque, Inc., Kyoto, Japan), 20 × 250 mm; mobile phase A, 0.1% TFA in H2O; mobile phase B, 0.1% TFA in CH3CN; gradient elution, 0–4 min at 85% B, 4–9 min at 85%–100% B, and 9–10 min at 100% B; flow rate, 10 mL/min; and UV detection at 254 nm. ESI-HRMS m/z calcd for C38H41N6O4 ([M+H]+) 645.3184, found 645.3186. 1H NMR (400 MHz, CD3CN) δ 8.76–7.39 (m, 3H), 7.21 (d, J = 33.1 Hz, 2H), 7.11 (dd, J = 9.5, 4.9 Hz, 2H), 6.92 (d, J = 9.1 Hz, 2H), 6.84 (s, 2H), 4.54 (dd, J = 33.0, 5.4 Hz, 2H), 3.36 (tq, J = 13.7, 6.8 Hz, 2H), 3.24 (s, 12H), 1.23 (dd, J = 22.2, 6.8 Hz, 12H).
Mechanism via which the CTS probe detects acrolein
We also determined the mechanism via which acrolein can be visualized in cancer cells using the CTS probe (Supplementary Fig. 1). Our findings indicate that the CTS probe is taken up by cells via endocytosis, with the TAMRA scaffold playing an important role in internalization. In healthy cells, the CTS probe remains inactive and is excreted back into the extracellular environment by exocytosis. However, in cancer cells, the CTS probe undergoes a [3+2] cycloaddition reaction upon encountering intracellular acrolein, resulting in formation of a diazo derivative. This derivative then reacts with the nearest organelle in the cancer cells, leading to covalent attachment of the TAMRA fluorophore to the organelle [19], allowing for labeling and imaging of cancerous tissue at the cellular level.
CTS assay
We used the CTS assay to analyze 126 breast tissue samples as well as fluorescence microscopy analysis using both CTS probe fluorescence staining (red) and Hoechst 33342 and 33258 fluorescence staining (blue) (Fig. 1). Each live breast tissue sample was obtained by FNAB using a 22-G needle and a 10-mL syringe. The contents of the syringe were then placed on a glass slide, after which 50 μL of the CTS probe with Hoechst dye and encapsulating agent were immediately dripped onto the slide. Finally, a glass coverslip was applied and the slide was imaged using a fluorescence microscope. Whole-slide fluorescence images with a range of 2 × 1 cm were captured in a low-power field (40×). Images of cell clusters stained red by the CTS probe were also captured in high-power fields (200×, range, 5 mm × 5 mm/400×, range, 2.5 mm × 2.5 mm) for morphological examination (Supplementary Fig. 2). The mean time required for diagnosis using the CTS assay was 5 min per tissue sample, and only one person was required to perform the assay.
Analysis of CTS images
CTS images were analyzed in accordance with the diagnostic criteria outlined in the CTS assay flow chart (Fig. 2) and categorized into four groups. Representative fluorescence and PAP stained images for each category are shown in Fig. 2. Category 4 was diagnosed as malignant (positive) and categories 1–3 as benign or normal (negative). In Figure 2, representative fluorescence microscopy images obtained by the CTS assay and by PAP staining revealed invasive ductal carcinoma (category 4), fibroadenoma (category 2–3), a mucocele-like lesion (category 2), and normal breast tissue (category 1). PAP staining identified the invasive ductal carcinoma as malignant (Fig. 2B4) and the fibroadenoma and normal breast tissue as benign (Fig. 2B1–2B3).
In category 4, fluorescent aggregated cells (≥5) were red in the cytoplasm with enlarged nuclei (≥10 μm) and had a high nuclear/cytoplasmic (N/C) ratio and irregular nucleus. We investigated the major axis of the nuclei of cells stained with Hoechst dye (blue) (Fig. 2A4). The criterion for defining cells with enlarged nuclei (≥10 μm) as malignant was based on an examination of the major nuclear axis of 20 cancer cells and 20 normal or benign ductal epithelial cells stained with Hoechst dye (blue) in which the CTS assay established 10 μm as the threshold for differentiation between malignant and benign/normal cells (Supplementary Fig. 3).
In category 3, although fluorescent aggregated cells (≥5) were red in the cytoplasm, they had a low nuclear cytoplasmic (N/C) ratio and smaller nuclei, were <10 μm in size, and had a regular shape (Fig. 2A3). In category 2, epithelial cells without fluorescent aggregated cells (<4) were detected (Fig. 2A2). In category 1, the CTS assay did not identify any epithelial cells with cytoplasmic staining (Fig. 2A1).
Three blinded diagnosticians working independently visually evaluated each CTS image to determine whether it was positive or negative. CTS images were deemed to be positive when diagnosed by two or three diagnosticians as positive using the CTS assay and to be negative when diagnosed as positive by zero or one diagnostician. The diagnosticians registered their findings in the Research Electronic Data Capture (Redcap) system hosted at Osaka University using a HIPAA-compliant secure web application [23]. Access to servers and systems is restricted by user accounts and passwords, and a full audit trail is recorded.
Papanicolaou staining
We performed FNAB twice for each lesion. The second samples were fixed in ethanol and subjected to PAP staining, after which they were compared with the samples subjected to the CTS assay (Fig. 1). The PAP staining protocol was performed following the same procedure as that used in the Pathology Department at Osaka University. PAP staining was interpreted by skilled experienced cytopathologists and specialists using International Academy of Cytology Yokohama system-compliant categories.
Measurement of fluorescence intensity of the CTS assay
Regions of cellular aggregation were excised from the CTS images and analyzed by Nikon NIS-Elements image analysis software with 200× magnification. The median fluorescence intensity of the areas that were stained red was measured in each cell.
Statistical analysis
The diagnostic accuracy of the CTS assay was compared with that of PAP staining by PS analysis. The McNemar test was used to assess the relationship between the results of the CTS assay and those for PAP staining. The Mann–Whitney test was used to compare the fluorescence intensity of the CTS assay between malignant and benign/normal breast tissue. All statistical analyses were performed using R version 4.0.2 (R Foundation for Statistical Computing, Vienna, Austria). A P-value <0.05 was deemed to be statistically significant.
Ethics statement
The study protocol was approved by the medical ethics committee of Osaka University (approval number 20197). In view of the retrospective observational nature of the research, the requirement for written informed consent was waived. However, informed consent was obtained via the opt-out route on the hospital’s website.