Insects and plants
B. minax larvae and citrus fruits were collected on 31st July, 2018 from San Douping (N 30°821, E 111°051), Hubei Province, China. Healthy and active B. minax larvae were reared in unripe citrus fruits at 23°C in the laboratory.
Citrus fruits with and without infestation by B. minax larvae were considered treatment and control samples, respectively. These samples were collected on Sept 1st and Oct 1st, corresponding to B. minax first instar larvae and second instar larvae, respectively. The pulp was separated from citrus fruits, immediately placed into liquid nitrogen and then stored at −80°C.
RNA isolation, cDNA synthesis and qRT-PCR
Total RNA was isolated using RNA TRIzol (Takara, Japan) following the manufacturer's instructions. First-strand single-strand cDNA was prepared using a PrimerScriptTM RT Reagent Kit (TaKaRa Bio, Dalian, China) according to the manufacturer’s instructions. Samples of 1st-, 2nd- and 3rd-instar larvae were used for stage-specific expression profiles, while different tissues of the 2nd-instar larvae were used for tissue-specific expression profiles.
The mRNA levels were measured by quantitative real-time polymerase chain reaction (qRT-PCR) using SYBR® Premix Ex Taq™ II (Tli RNaseH Plus, TaKaRa Bio) with StepOnePlus™ (Thermo Fisher Scientific). Real-time PCRs were performed in technical triplicates under the following procedures: a holding cycle of 95 ℃ for 30 s, followed by 40 cycling stages of 95℃ for 5 s, 55℃ for 30 s, and 72℃ for 31 s. The relative expression was calculated based on the 2−ΔΔCT method (Livak and Schmittgen, 2001).
Analysis of citrus fruit metabolomics based on LC-MS data
The citrus pulp was ground by zirconia beads in a Mixer mill (MM 400) for 1.5 min at 30 Hz. One hundred milligrams of powder and 1.0 ml of 70% aqueous methanol were mixed and incubated overnight at 4°C for extraction. Before LC-MS analysis, the extracts were absorbed by centrifugation at 10000 g for 10 min and filtered through a microporous membrane (0.22 µm pore size).
Samples (2 μl) were injected into an LC-ESI-MS/MS system (HPLC, Shim-pack UFLC SHIMADZU CBM30A), and a column (Waters ACQUITY UPLC HSS T3 C18, 1.8 µm, 2.1 µm*100 mm) was used to analyse the sample extracts. The solvent system included water (0.04% acetic acid) as solution A and acetonitrile (0.04% acetic acid) as solution B following the gradient program. The A:B (v/v) gradient was 95:5 at 0 min, 5:95 at 11.0 min, 5:95 at 12.0 min, 95:5 at 12.1 min, and 95:5 at 15.0 min. The flow rate was kept at 0.40 mL/min, and the temperature was maintained at 40°C.
A triple quadrupole-linear ion trap mass spectrometer (Q Trap), API 4500 QTrap LC/MS/MS system, equipped with an ESI Turbo Ion-Spray interface, was used to perform linear ion trap (LIT) and triple quadrupole (QQQ) scans. The ESI source operation parameters were carried out following Chen et al. (2013). In brief, the electrospray ionization temperature was 500°C, ion spray voltage (IS) was 5500 V, and ion source gas I (GSI), gas II (GSII), and curtain gas (CUR) were set at 55, 60, and 25.0 psi, respectively. Ten and 100 μmol/L polypropylene glycol solutions under QQQ and LIT modes were used for instrument tuning and mass calibration, respectively. QQQ scans were acquired as MRM experiments with collision gas (nitrogen) set to 5 psi. DP and CE for individual MRM transitions were performed with further DP and CE optimization. A specific set of MRM transitions was monitored for each period according to the metabolites eluted within this period.
Plant allelochemical feeding assays
Second-instar B. minax larvae were used to detect the expression levels of detoxification genes. Synchronous larvae were fed artificial diets supplemented with 6 plant secondary metabolites. The control larvae were fed an artificial diet with the same amount of DMSO/H2O. Twenty larvae were fed an artificial diet containing compounds. After 72 h, active larvae were collected for RNA extraction and qRT-PCR.
dsRNA preparation and microinjection
dsRNA was synthesized by a Transcript Aid T7 High Yield Transcription Kit (Thermo). The dsRNA DNA template (Table S1) was amplified by primers containing the T7 RNA polymerase promoter at both ends, and the purified DNA template (1 μg) was used to synthesize dsRNA. The quality and size of dsRNA were verified by 1% agarose gel electrophoresis and spectrophotometer (Thermo). Approximately 2 μg dsRNA was injected into the abdomens of the second instar larvae by the microinjection method. After injection, the B. minax larvae were placed in green citrus, which remained consistent with the natural environment. The survival rate was statistically significant after 72 h, and lively larvae were collected to detect RNAi efficiency. This experiment was replicated 6 times.
Statistical analysis
SPSS 22.0 and R software were used for statistical analysis. The heat maps and Venn diagrams of the transcriptome and metabolome were examined with an online R package (http://www.ehbio.com/ImageGP/index.php/Home/Index/PHeatmap.html). The gene expression level and survival rate were analysed with SPSS 22.0 software by independent Student’s t-test. The data are presented as the means ± SEM, and significance levels were set at *P < 0.05, **P < 0.01, and ***P < 0.001.