2.1 Materials and reagents
P. sibiricum was purchased from Hunan and Henan Province of China. Sephacryl-300 HR and DEAE-52 cellulose were bought from GE Healthcare (Gothenburg, Sweden). Taq DNA Polymerase and gel/PCR Extraction Kit were obtained from Tiangen (Beijing, China). The compounds, α-Diphenyl-β-picrylhydrazyl (DPPH), and dimethyl sulfoxide (DMSO) were obtained from Sigma-Aldrich (Shanghai, China). Dulbecco's modified eagle medium (DMEM, high glucose), fetal bovine serum (FBS), trypsin and phosphate buffered saline (PBS) were bought from Thermo Fisher Scientific (Beijing, China). BALA/c mice were purchased from Shandong University laboratory animal center. Bacterial Physiological and Biochemical Identification Reaction Tube were obtained from Binhe Co. Ltd. (Hangzhou, China).
2.2 Isolation and identification of the endophytic bacteria from Polygonatum sibiricum
After the surface of Polygonatum sibiricum root was disinfected, the internal tissues were placed on the separation plate evenly and cultivated in an incubator (37°C, several days). The single colonies were picked according to the colony morphology, amplified and conserved by a conventional method. Specifically, the monoclonal colony was selected in the LB solid medium containing NaCl 10 g/L, yeast 5 g/L, tryptone 10 g/L and agar 15%, respectively. To isolate the targeted strains, plates were incubated in incubator (37°C, 48-72 h). The isolated single colonies were cultivated in LB liquid medium on a shaker (37°C and 200 rpm, 72 h).
The bacterium named as B3 exhibited the highest production of EPS was identified based on morphologic, physiological and biochemical features. After that, the 16S rDNA fragment was synthesized by PCR with two universal primers 9F (5’-GGTTACCTTGTTACGACTT-3') and 1492R (5’-AGAGTTTGATCCTGGCTCAG-3') [17]. Furthermore, it was sequenced (Beijing Genomics Institute, Beijing, China) and compared with the 16S rDNA sequences of BLAST database online. Its evolutionary with other bacteria was analyzed by MEGA (version 6.1) software through the 16S rDNA sequence analysis [18].
2.3 Preparation of the EPS-B3
Endophytic bacterium Bacillus sp. B3 was cultured on a shaker (200 rpm, 37°C and 72 h). And fermentation broth was centrifuged (8000 g, 10 min) to remove cells. The supernatants were precipitated in ethanol (1:4, v/v) at 4°C for 12 h and then centrifuged (8000 g, 10 min). Precipitates were gathered and freeze-dried to obtain crude polysaccharides. In addition, the proteinase was added to remove the extra proteins in the supernatant using the savage method [19]. After decoloration by hydrogen peroxide, desalting through dialysis, the sample was further purified with the DEAE column and Sephacryl-300 HR chromatography as previous research [20]. Beyond that, polysaccharide content of the purified sample was analyzed as previously reported [21] and the fractions were combined and lyophilized after desalting.
2.4 Molecular Weight Determination of EPS-B3
High-performance gel permeation chromatography (HPSEC) and multi-angle laser light scattering (MALLS) spectrometer (Wyatt, DAWN HELEOS-II) were used to analyzed the homogeneity and average molecular weight (Mw) of EPS-B3 were analyzed as previously reported [20, 22]. Before 250 μL samples (5 mg/mL) was added into MALLS system at flow velocity of 0.5 mL/min, the EPS sample was completely dissolved in 0.2 mol/L NaNO2 solution which contained 0.02% NaN3.
2.5 Analysis the Monosaccharide composition of EPS-B3
Before monosaccharide ingredient of the sample was analyzed by ion chromatography (IC) (Dionex, Sunnyvale USA), 10 mg EPS-B3 was hydrolyzed with 3 M of trifluoroacetic acid (TFA) in a total volume of 1 mL at 110°C for 6 h. After the excess acid was discarded, 1 mL acid hydrolyzed sample (10 mg/L) was analyzed by IC using carbopac PA10 column (4 mm × 250 mm, 10 μm) (Dionex) with 10 mM NaOH at a 0.3 mL/min flow rate. Finally, the monosaccharide mixtures (containing L-fucose, L-rhamnose, D-galactose, D-glucose, D-mannose and D-fructose) were used as standard sugars and the content of each component was analyzed according to the relative area of the peak.
2.6 FT-IR determination
Fourier transform infrared (FT-IR) spectral of the purified sample was analyzed by using FT-IR spectrum (Bruker ALPHA-T). The EPS-B3 was mixed with KBr powder (sample: KBr approximately 1:100) and compressed into pellet for FT-IR determination between wave numbers 450 cm−1 and 4000 cm-1.
2.7 Antioxidant property analysis of EPS-B3 and PSP
2.7.1 DPPH free-radical scavenging activity
DPPH free-radical scavenging ability of PSP and EPS-B3 were investigated as previous research [23] with slight modifications [20]. Briefly, 250 μL ethanol solution including 0.02% DPPH was added to the different concentrations (0, 2, 4, 6, 8, and 10 mg/mL) of sample solutions (1 mL). After the mixed solution was kept away from light for 6 min, absorbance of each group at 517 nm was measured. All groups were performed in triplicate and the scavenging activities of all groups were calculated by the formula followed:
DPPH free-radical scavenging activity (%) = (Ac + Ab– As) / Ac × 100
Where As was the absorbance of experimental group; Ac was the absorbance of the group without samples; Ab was the absorbance of the group without DPPH solution.
2.7.2 Superoxide radical scavenging ability
The superoxide radical scavenging activities of samples were estimated by monitoring the inhibition of pyrogallol autoxidation as previous method [24]. 1 mL sample at different concentrations (0, 2, 4, 6, 8 and 10 mg/mL) was added into the test tube which contains 4.5 mL PBS (0.05 M, pH 8.2) preheated to 25°C. Afterward, pyrogallol solution (0.4 mL, 45 mmol/L) was added into the mixture and test tube was incubated (25°C, 15 min) in water bath. Finally, 3mL HCl solution (8 M) was added to interrupt the reaction and the absorbance of solutions at 320nm was analyzed. The superoxide radical scavenging activity could be calculated by the formula followed:
scavenging effect (%) = (A0− As)/ A0× 100%
Where A0 was the absorbance of group without the sample, while As was the absorbance of the experimental group.
2.7.3 Hydroxyl radical scavenging ability
The ·OH scavenging effect was analyzed via the Fenton’s reaction [20, 25]. Firstly, the mixture of 1, 10-phenanthroline (1.0 mL, 0.75 mM), FeSO4·7H2O (1.0 mL, 0.75 mM), PBS buffer (2 mL, pH 7.4) and various concentrations (0, 2, 4, 6, 8, 10 mg/mL) of samples solution (1.0 mL) was generated. Before the reactions were incubated (37°C, 90 min), 1.0 mL H2O2 (0.01% v/v) was added into solutions to start the interaction. The absorbance of all groups at 510 nm was recorded. The ·OH scavenging effect was analyzed as follows:
Scavenging effect (%) = [(As- A0)/ (Ab – A0)] ×100
Where As was the absorbance of experimental group; A0 was the absorbance of group containing H2O2 without samples; Ab was the absorbance of group without H2O2.
2.7.4 Ferric reducing activity
The Ferric reducing abilities of EPS-B3 and PSP were assessed by previous modified method [20]. Briefly, samples (1 mL) at different concentrations (0, 2, 4, 6, 8, and 10 mg/mL) were added into 5 mL PBS (0.2 M, pH 6.6) which contained K3Fe(CN)6 (5%, w/v) and incubated (50°C, 20 min) in water bath. Next, 2.5 mL TFA (10%, w/v) was added to interrupt the reaction and the mixture was centrifuged at 1200 g for 10 min. Then, 3.0 mL H2O containing FeCl3 (0.0167%, w/v) were added into the supernatant (2.5 mL) and incubated (50°C, 10 min). The absorbance of the mixture was measured at 700 nm. The equal volume of H2O instead of polysaccharide solution was used as control. The absorbance of reaction solution at 700 nm was positively correlated with the Ferric reducing power.
2.8 Determination of antitumor activity
2.8.1 Determination of antitumor activity in vitro
EPS-B3 and PSP at various concentrations (2.5-80 μg/mL) were incubated with S180 tumor cells, respectively. The blank group was treated with only the CCK8 solution without either polysaccharides or culture medium. The control group was treated with the CCK8 solution in culture medium without polysaccharides. After incubated in an incubator (37°C, 4 h), the absorbance of mixture at 450 nm was measured. The inhibition rate for S180 tumor cells was calculated as follows:
The inhibition rate (%) = (Ac-Ae) / (Ac-A0) ×100
Where Ae signified the absorbance of experimental group; Ac signified the absorption of blank group; A0 signified the absorbance of control group.
2.8.2 Determination of antitumor activity in vivo
The tumor-bearing mouse model was established by injecting 0.2 mL PBS buffer containing 4 × 105 S180 cells into the right armpit of the mice. 7 days later model was constructed. The mice were divided randomly into four groups: a control group (PBS), a group of PSP and two groups for EPS-B3 at dosages of 100, 300 mg/kg, respectively. The mice were treated with above solution through single intragastrical administration every day in 24 days.
To monitor growth of tumors, the length and width of the tumor in armpit of S180 tumor-bearing mice were accurately measured every 4 days. The volumes and inhibition rate (TIR) of tumor were analyzed and plotted as formula follows:
Tumor volume = (Tumor length × tumor width × tumor height)/2
TIR (%) = (M−NM) ×100
Where M signified the percentage of tumor weight to mouse weight in control group; and N signified the percentage of tumor weight to mouse weight in the PSP or EPS-B3 treatment groups
2.9 Determination anti-polysaccharide antibody titers
Antibody titers of anti-PSP and anti-EPS-B3 in serum of S180 tumor-bearing mice were detected by ELISA. 2.5 μg/mL (100 μL/well) of PSP and EPS-B3 in 0.05 M Na2CO3 (pH 9.6) buffer was added into ELISA plates and incubated at 4°C overnight. 250 μL/well wash buffer (PBS including 0.1% Tween 20) was used to wash plates for four times and 200 μL/well PBS (containing 1% BSA) was used to block plates at 37°C for 2 h. 100 μL serum dilutions from 1:100 to 1:102400 in PBS (containing 0.05% Tween 20, pH 7.4) were added into the plates and incubated at 37°C for 2 h. 250 μL/well wash buffer was used to wash plates for four times again. 100 μL/well PBS containing Horseradish peroxidase-conjugated polyclonal goat (HRP-Goat) anti-mouse IgG (1:3000, 0.05% Tween 20) were added into the plates and incubated at 37°C for 1 h. After the plates were washed as mentioned above, 100μL/well 3, 3, 5, 5-tetramethyl benzidine (TMB, Thermo fisher) was added and incubated at 25°C for 15 min in the dark. 100 μL H3PO4 (1 mol/L) was added to interrupt the reaction, and absorbance of the mixture at 450 nm was measured. The absorbance values of test samples were matched into the linear regression curve of a calibrated control (reference serum) to analyze the titers.