Diagnosis of De Novo Mosaic Balanced Translocation t(1;3)(q42;q25) in a Fetus Conceived Using Pre-implantation Diagnosis Due to Presence in the Father of a Different Balanced Translocation

doi:10.21203/rs.3.rs-736014/v1

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Diagnosis of De Novo Mosaic Balanced Translocation t(1;3)(q42;q25) in a Fetus Conceived Using Pre-implantation Diagnosis Due to Presence in the Father of a Different Balanced Translocation

https://doi.org/10.21203/rs.3.rs-736014/v1

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Introduction

Preimplantation genetic testing (PGT) had widely been applied in reciprocal translocation carriers to improve the clinical outcome of assisted reproduction. De novo mosaicism balanced reciprocal translocations in fetus conceived using PGT from a balanced translocation carrier parent has been rarely reported, and the driving mechanism is not clearly.

Methods

Chromosomal microarray analysis (CMA) , karyotype analysis and fluorescent in situ hybridization (FISH) were performed to verify the type and heredity of the rearrangement. STR analysis was used to identify potential contamination as well as kinship verification and identification.

Results

A rare de novo mosaicism balanced reciprocal translocation t(1,3)(q42;q25) in fetus conceived using PGT-SR from a t(12;14)(q22;q13) balanced translocation carrier father was been diagnosed by multiplatform genetic techniques. At 31 weeks and 2 days of gestation, premature delivery was caused by uncontrollable uterine contractions. At the 21-months follow up, infant has achieved all psychomotor development milestones as well as growth within the normal reference range.

Conclusion

PGT cases still need close observation in prenatal diagnosis and long-term follow-up.

Molecular Genetics

Pre-implantation diagnosis

PGT-SR

prenatal diagnosis

balanced reciprocal translocation mosaicism

Balanced reciprocal translocations (BRT) are common structural chromosomal rearrangement in humans, with an incidence rate of approximately 1/500 ~ 1/625 in newborns¹. Most BRT carriers have the normal phenotype but a high risk of abortion, infertility, or birth defects in offspring. Most reciprocal translocations are unique. A few to several percent of translocations disrupt haploinsufficient genes or their regulatory regions and result in clinical phenotypes. Balanced translocations from patients with clinical phenotypes have been valuable in mapping disease genes and in illuminating cis-regulatory regions ². Couples in whom one partner has a balanced translocation or inversion may have an overall miscarriage rate as high as 49% resulting from unbalanced gametes ³. Mosaicism for BRT (BRTM) has been rarely reported, most of the previously reported cases had been diagnosed by cytogenetic analysis investigation prescribed by infertility, miscarriages, and/or unbalanced chromosome rearrangement in the offspring ⁴. Furthermore,most of BRTM demonstrated in lymphocyte cultures, have been described ⁵.

Currently, although there are insufficient data indicating that preimplantation genetic testing (PGT) improves the live birth rate in couples with recurrent miscarriage (RM) carrying a structural chromosome abnormality ³, PGT is still an established alternative to invasive prenatal diagnosis and as such may avoid adverse pregnancy in couples with structural chromosome abnormalities, and also for a high risk of transmitting genetic disorders^6–8. Although an accurate projection of the anticipated number of unbalanced embryos is not possible at present, confirmation of normal/balanced status results in high pregnancy rates and diagnostic accuracy⁹.

It is well known that PGT for structural rearrangements (PGT-SR) can hardly further distinguish between the balanced translocation and structurally normal embryo, so the embryos may still be carriers of BRT inherited from their parents. However here we report a very rare case of mosaic de novo BRT t(1,3)(q42;q25) in fetus conceived using PGT-SR in a t(12;14)(q22;q13) BRT carrier father

2.1 Statement

Patients and their families agree to donate remaining samples and data to scientific research, technical innovation and clinical application after removing the identifiable personal information, and the informed consent was gained from the patient.

2.2 Sample information

A 31-year-old pregnant woman, gravida 1 para0, and her husband 32 years old, suffered from primary infertility for several years. The husband with karyotype 46,XY,t(12;14)(q22;q13) was diagnosed as asthenospermia, while the pregnant woman’s karyotype was normal. Subsequently, the couple underwent in vitro fertilization and embryo transfer (IVF-ET) and PGT-SR in other hospitals. In routine protocols, a chromosome karyotype "balanced" embryo was transferred and resulted in a successful pregnancy.

At 11 weeks of pregnancy, the pregnant woman came to our hospital for registration and agreed to accept interventional prenatal diagnosis (amniocentesis) in the second trimester of pregnancy after informed consent. Both karyotype and SNP-array analysis were performed at 19 weeks of gestation in order to evaluate. Short tandem repeat (STR) markers were used for rough identifying relationship testing and potential maternal contamination.

3.1Cell culture and karyotype analysis

The karyotype of this family was reanalyzed in our laboratory. Cell culture and G-band karyotype analysis were performed according to standard cytogenetic methods. Fetal cells obtained from amniotic fluid and cord blood were cultured with double-line using standard methodologies. At least twenty metaphases chromosomes were counted and three metaphases chromosomes were analyzed in each line by two independent laboratory technicians¹⁰.

3.2 CMA

Affymetrix CytoScan 750K array platforms were used to detect copy number variants was performed as described in previous research¹⁰,

3.3 FISH

The balanced reciprocal translocation was confirmed by pter (1,3,12 pter Subtelomere FISH Probe) green and qter (1,3,12,14 qter Subtelomere FISH Probe) red probes, according to the BlueFish Probes Labeling Protocol (BlueGnome, Cambridge, UK).

3.4 STR

STR analysis was used to exclude maternal contamination and to identify family affinities by using a 5-dye fluorescent technology and a co-amplification method to detect 21 loci (20 STR loci and Amelogenin, Supplemental Table 1) (Microreader^™ 21(Direct) ID System, Microread Genetics, China) according to the operating procedure. Among 21 STR loci, heterogenic contamination was judged when at least 3 loci have more than two alleles.

A routine cytogenetic analysis of the fetus suggested a mosaic de novo BRT with the karyotype mos 46,XY,t(1,3)(q42;q25)[40]/46,XY[39], whereas the father's karyotype was 46,XY,t(12;14)(q22;q13), and only the pregnant woman had normal karyotypes 46,XX(Fig.1A).The results of FISH showed that the fetus was the carrier of translocation between the subtelomere of chromosome 1 and chromosome 3, with the mosaic rate of 40%. However, no translocation was found in the subtelomeres probes of chromosome 12 and 14 (Fig.1B). Genome wide SNP-array analysis detected no copy number variants (CNVs) in the genomic DNAs of fetal amniotic fluid cells, excluding cryptic genomic imbalances at translocation breakpoints (Fig.2). According to all methods used, the fetal karyotype could be written as 46,XY,t(1,3)(q42;q25)[40]/46,XY[39].ish t(1;3)(1p+,3q+;3p+,1q+),12p13q24.3(12p×2,12q×2),14p13q32(14q×2)[8]/1p36.3q44

(1p×2,1q×2),3p26q29(3p×2,3q×2),12p13q24.3(12p×2,12q×2),14p13q32(14q×2)[12].arr[GRCh37](1-22)×2,(XY)×1

At the same time, the STR results excluded the possibility of exogenous contamination, and all the tested STR loci were inherited by either parent indicating genetic compatibility of father and son.

Ultrasonography at 30 weeks of gestation showed no abnormal fetal development. At 31 weeks and 2 days of gestation, premature delivery was caused by uncontrollable uterine contractions. The birth weight of the newborn was 1680g and the length was 42cm. The Apgar scores of 10 at 1 minute, 5 minutes and 10 minutes. Neonatal echocardiography was normal except for patent foramen ovale. The results of chromosome karyotype in neonatal umbilical cord blood were mos 46,XY,t(1;3) [50]/46,XY[50], which was basically consistent with amniotic fluid. Placental pathology showed no idiopathic abnormality.

At the 21-months follow up, the growth and development of the infant were normal, he raised his head, turned over and sitted on schedule. He walked steadily when 18 months old. Now he can walk, run and jump freely, and have better language ability than his peers, according to his parents' description.

Chromosomal BRT was found in 3.2% of couples with recurrent implantation failure ¹¹. PGT had widely been applied to improve the assisted reproduction outcome of reciprocal translocation carriers. However, current techniques have the same limitation, and therefore, it is hard to distinguish between the balanced translocation and structurally normal embryo. To solve this problem, Hu et al¹² established a clinical applicable approach to identify precise breakpoint of reciprocal translocation and to further distinguish normal embryos in PGT. Recently, Zhang et al demonstrate a highly efficient approach for preimplantation genetic haplotyping in clinical application of balanced translocation carriers. Unfortunately, these techniques have to be performed based on the carrier’s locus information, so they do not appear to solve the de novo BRTM as our case. Our case as one of the few de novo BRTM carriers detected by prenatal analysis and confirmed after birth.

De novo apparently BRT are detected in approximately 1/800~1/1000 prenatal tests^{13, 14}, a preferential involvement of chromosomes 22, 7, 21, 3, 9 and 11 and a less involvement of chromosomes X, 19, 12, 6 and 1 was observed. Nonrandom distribution of the breakpoints across chromosomes was noticed. Association in the location of recurrent breakpoints and fragile sites was observed for chromosomes 11, 7, 10 and 22, while it was not recorded for chromosome 3¹⁴. In the present case, we confirmed the break points at 1q34 and 3q25, this finding partly coincides with the involved chromosome as above literature described, but with different breakpoints.

BRT mosaicism had been rarely reported⁴ mainly observed in subjects with a normal phenotype accompanied by reproductive failure. Estimated frequencies in the postnatal and prenatal populations examined were calculated to be 5.7 × 10⁻⁵ and 4.1 × 10⁻⁵ by Opheim et al¹⁵. Recently, as described by Garzo et al ⁴, just 25 cases had been reported in previous research, and they described 10 new cases of balanced reciprocal translocation mosaicism, and suggest that carrier individuals might be more frequent than expected. To date the incidence of BRTM is poorly defined, may be explained by that there are few reported cases, which are not convenient for statistics. Another reason is due to the missed or inaccurate diagnosis of BRTM in the detection process, such as low proportion mosaicism, lack of technical means to detect micro-abnormal of chromosome. Finally, the size of the recombination fragment, the resolution of chromosome bands and the number of cell counts were all related to the accurate diagnostic of BRT mosaicism. Indeed, mosaicisms must be confirmed in at least two different cultures or in different tissues to exclude the possibility of in-vitro origin of the chromosomal rearrangement¹⁶. In this study, fetal chromosomal abnormalities were observed in two separate initial cultures of both amniotic fluid and cord blood, with the similar mosaicisms rate.

The origin of BRTM is still obscure. The plausible driving mechanism has been postulated to be either postzygotic¹⁷ or to occur in the prezygotic¹⁸. There are two hypothetical mechanisms for postzygotic events: mosaicisms (which occurs in mitosis of single zygotes) and chimerism¹⁹ (fusion of two zygotes). Chimerism can be distinguished from mosaicism by evaluation of the extent of genotypic differences, such as STR. Indeed, in mosaicism one paternal allele and one maternal allele should be found at all loci, whereas in chimerism two alleles for one or both parental contribution(s) should be observed at least at one locus¹⁹. As indicated in Figure 3, an apparently STR result showed that one paternal allele and one maternal allele were found at all loci. Considering that the mosaicisms proportion of our case was close to 50% in both amniotic fluid cells and umbilical cord blood, the mechanism of BRTM in our case was plausible due to a de novo mitotic error may originate in a zygote within the first or early cell divisions, which results in a mosaic embryo with the variant present in a half proportion of cells, and this mosaicism can affect somatic and/or gonadal tissues²⁰.However, due to the growth deviation of different cell types in the process of cells culture, the mosaic ratio of different fetal tissues may be different.

At present, the relationship between phenotype and BRT mosaicism/chimerism (including tissue-specific mosaicism) was not clear. A long-term follow-up study suggested that children with prenatally diagnosed de novo apparently BRT have similar long-term health and developmental outcomes as children of the same age in the general population ²¹. However, a de novo apparently balanced translocation still may lead to the disruption of a gene and therefore be causative of abnormal phenotypic consequences ^{22, 23}. Except for premature delivery and low birth weight, there was no significant abnormality in prenatal ultrasound and postpartum physical examination in our case. And according to the 21-months follow up, infant has achieved all psychomotor developmental milestones as well as growth within the normal reference range. Certainly, long-term health and developmental follow-up is needed for this infant, when he reaches child-bearing age, sperm karyotype analysis can be used to determine the rate of gonadal mosaicism in order to guide his fertility, assisted reproductive technology will be recommended to avoid adverse pregnancy if necessary.

To the best of our knowledge, similar to our patient, only Kim et al²⁴ reported the first case of a de novo BRT conceived using PGT from a balanced translocation carrier mother. So our case is the second and unique case reported in the literature for prenatal diagnosis of a de novo BRT mosaicism t(1,3)(q42;q25) in fetus conceived using PGT-SR from a t(12;14)(q22;q13) balanced translocation carrier father. The most reasonable driving mechanism for BRT mosaicism in our case was that a de novo mitotic error may originate in a zygote within the first or early cell divisions, which results in a mosaic embryo with the variant present in a half proportion of cells. Therefore, was the de novo BRT an accidental event or was PGT induced cell damage leading to new translocation? This needs to be studied.

Acknowledgements

The authors would like to acknowledge and thank all the participators for their cooperation in this study. Thank Be reative lab (Beijing) for their expert laboratory work

Statement of Ethics

This report is a retrospective analysis of the patient's clinical test results and does not have an impact on the patient's clinical decision and management strategy. So ethics approval was not required.

Conflict of Interest Statement

The authors have no conflicts of interest to declare.

Written informed Consent for Publication of case:

Written informed consent was obtained from the patient for publication of the case details and accompanying images.

Availability of data and materials

All data generated or analysed during this study are included in this published article.

Funding statement: Not applicable

Author contribution

Shaoqin Zhang and Jianjiang Zhu clinically reviewed the patient and wrote the manuscript. LiRong Cai and Guodong Tang performed the experiments and interpreted the data. Limei Xu and Ran Meng carried out genetic counseling and interventional prenatal diagnosis for pregnant women. Hong Qi jointly conceived this studies and critically revised the manuscript. All authors approved the final version of the manuscript.

ORCID

Shaoqin Zhang: https://orcid.org/0000-0001-8465-8587

Jianjiang Zhu: https://orcid.org/0000-0003-4242-4904

Hong Qi: https://orcid.org/0000-0001-5282-5790

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You are reading this latest preprint version

Diagnosis of De Novo Mosaic Balanced Translocation t(1;3)(q42;q25) in a Fetus Conceived Using Pre-implantation Diagnosis Due to Presence in the Father of a Different Balanced Translocation

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Version 1

Abstract

Figures

1. Introduction

2. Materials

2.1 Statement

2.2 Sample information

3. Method

3.2 CMA

3.3 FISH

3.4 STR

4. Result

Discussion

Conclusion

Declarations

References

Supplementary Files

Status:

Version 1