Audic, S., Claverie, J.M., 1997. The significance of digital gene expression profiles. Genome Res. 7(10), 986-995.
Avshalumov, M.V., Chen, B.T., Marshall, S.P., Pena, D.M., Rice, M.E., 2003. Glutamate-Dependent Inhibition of Dopamine Release in Striatum Is Mediated by a New Diffusible Messenger, H2O2. The Journal of Neuroscience. 23(7), 2744-2750.
Bączek-Kwinta R., Juzoń K., Borek M., Antonkiewicz J., 2019. Photosynthetic response of cabbage in cadmium-spiked soil. Photosynthetica, 57(3)3, 731-739.
Baker, B.J.M., Reeves,R.D., HAjar, A.S.M., 1994. Heavy metal accumulation and tolerance in British populations of the metallophyte Thlaspi caerulescens J. & C. Presl (Brassicaceae). New Phytol. 127, 6l-68.
Bert, V., Bonnin, I., Saumitou-Laprade, P., Patrick de Laguérie, P.d., Daniel Petit, D., 2002. Do Arabidopsis halleri from nonmetallicolous populations accumulate zinc and cadmium more effectively than those from metallicolous populations? New Phytol. 155, 47-57.
Cao, F.B., Chen, F., Sun, H.Y., Zhang, G.P., Chen, Z.H., Wu, F.B., 2014. Genome-wide transcriptome and functional analysis of two contrasting genotypes reveals key genes for cadmium tolerance in barley. BMC GENOMICS. 15(1), 1-15.
Conesa, A., Götz, S., García-Gómez, J.M., Terol, J., Talón, M., Robles, M., 2005. Blast2GO, a universal tool for annotation, visualization and analysis in functional genomics research. BIOINFORMATICS. 21(18), 3674-3676.
Dong, T., Xu, Z.Y., Park, Y., Kim, D.H., Lee, Y., Hwang, I., 2014. Abscisic acid uridine diphosphate glucosyltransferases play a crucial role in abscisic acid homeostasis in Arabidopsis. Plant PHYSIOL. 165(1), 277-289.
Emamverdian, A., Ding, Y.L., Mokhberdoran, F., Xie, Y.F., 2015. Heavy metal stress and some mechanisms of plant defense response. THE SCIENTIFIC WORLD J.
Ernst, J., Bar-Joseph, Z., 2006. STEM, a tool for the analysis of short time series gene expression data. BMC BIOINFORMATICS. 7(1), 191-202.
Fan, J.L., Wei, X.Z., Wan, L.C., Zhang, L.Y., Zhao, X.Q., Liu, W.Z., Hao, H.Q., Zhang, H.Y., 2011. Disarrangement of actin filaments and Ca²+ gradient by CdCl2 alters cell wall construction in Arabidopsis thaliana root hairs by inhibiting vesicular trafficking. J PLANT PHYSIOL. 168, 1157-1167.
Fan, S.K., Fang, X.Z., Guan, M.Y., Ye, Y.Q., Lin, X.Y., Du, S.T., Jin, C.W., 2014. Exogenous abscisic acid application decreases cadmium accumulation in Arabidopsis plants, which is associated with the inhibition of IRT1-mediated cadmium uptake. FRONT PLANT SCI. 721(5), 1-8.
Farinati, S., DalCorso, G., Varotto, S., Furini, A., 2010. The Brassica juncea BjCdR15, an ortholog of Arabidopsis TGA3, is a regulator of cadmium uptake, transport and accumulation in shoots and confers cadmium tolerance in transgenic plants. New Phytol. 185(4), 964-978.
Gao, C.Q., Wang, Y.C., Jiang, B., Liu, G.F., Yu, L.L., Wei, Z.G., Yang, C.P., 2011. A novel vacuolar membrane H+-ATPase c subunit gene (ThVHAc1) from Tamarix hispida confers tolerance to severalabiotic stresses in Saccharomyces cerevisiae. MOL BIOL REP. 38, 957-963.
Gao, J., Sun, L., Yang, X.E., Liu, J.X., 2013. Transcriptomic analysis of cadmium stress response in the heavy metal hyperaccumulator Sedum alfredii Hance. PLOS ONE. 8(6), 1-10.
Grabherr, M.G., Haas, B.J., Yassour, M., Levin, J.Z., Thompson, D.A., Amit, I., Adiconis, X., Fan, L., Raychowdhury, R., Zeng, Q.D., Chen, Z.H., Mauceli, E., Hacohen, N., Gnirke, A., Rhind, N., di Palma, F., Birren, B.W., Nusbaum, C., Lindblad-Toh, K., Friedman, N., Regev, A., 2011. Full-length transcriptome assembly from RNA-Seq data without a reference genome. NAT BIOTECHNOL. 29(7), 644-652.
Guo, Q., Meng, L., Zhang, Y,N., Mao, P.C., Tian, X.X., Li, S.S., Zhang, L., 2017. Antioxidative systems, metal ion homeostasis and cadmium distribution in Iris lactea exposed to cadmium stress. ECOTOX ENVIRON SAFE. 139, 50-55.
Gupta, D.K., Pena, L.B., Romero-Puertas, M.C., Hernández, A., Inouhe, M., Sandalio, L.M., 2017. NADPH oxidases differentially regulate ROS metabolism and nutrient uptake under cadmium toxicity. PLANT CELL ENVIRON. 40, 509-526.
Halimaa, P., Lin, Y.F., Ahonen, V.H., Blande, D., Clemens, S., Gyenesei, A., Häikiö, E., Kärenlampi, S.O., Laiho, A., Aarts, M.G., Pursiheimo, J.P., Schat, H., Schmidt, H., Tuomainen, M.H., Tervahauta, A.I., 2014. Gene expression differences between Noccaea caerulescens ecotypes help identifying candidate genes for metal phytoremediation. ENVIRON SCI TECHNOL. 48(6), 3344-3353.
Hamada, T., Nakano, S., Iwai, S., Tanimoto, A., Ariyoshi, K., Koide O., 1991. Pathological study on beagles after long-term oral administration of cadmium. TOXICOL PATHOL. 19(2), 138-147.
He, Z., Li, Z., Lu, H., Huo, L., Wang, Z., Wang, Y., Ji, X., 2019. The NAC Protein from Tamarix hispida, ThNAC7, confers salt and osmotic stress tolerance by Increasing reactive oxygen species scavenging capability. Plants (Basel). 8(7), 221.
Herbette, S., Taconnat, L., Hugouvieux, V., Piette, L., Magniette, M.L.M., Cuine, S., Auroy, P., Richaud, P., Forestier, C., Bourguignon, J., Renou, J.P., Vavasseur, A., Leonhardt, N., 2006. Genome-wide transcriptome profiling of the early cadmium response of Arabidopsis roots and shoots. BIOCHIMIE. 88(11), 1751-176 5.
Hsu, Y.T., Kao, C.H., 2003. Role of abscisic acid in cadmium tolerance of rice (Oryza sativa L.) seedlings. Plant, Cell and Environment. 26, 867-874.
Hsu, Y.T., Kao, C.H., 2005. Abscisic acid accumulation and cadmium tolerance in rice seedlings.PHYSIOL PLANTARUM. 124, 71-80.
Ji, X., Nie, X., Liu, Y., Zheng, L., Zhao, H., Zhang, B., Huo, L., Wang, Y., 2016. A bHLH gene from Tamarix hispida improves abiotic stress tolerance by enhancing osmotic potential and decreasing reactive oxygen species accumulation. Tree Physiol. 36(2), 193-207.
Ji, X.Y., Zheng, L., Liu, Y.J., Nie, X.G., Liu, S.N., Wang, Y.C., 2014. A transient transformation system for the functional characterization of genes involved in stress response. PLANT MOL BIOL REP. 32(3), 732-739.
Jiang, Y.P., Cheng, F., Zhou, Y.H., Xia, X.J., Mao, W.H., Shi, K., Chen, Z.X., Yu, J.Q., 2013. Hydrogen peroxide functions as a secondary messenger for brassinosteroids-induced CO2 assimilation and carbohydrate metabolism in Cucumis sativus. J Zhejiang Univ-Sci B (Biomed & Biotechnol). 13(10), 811-823.
Khalili, M., Hasanloo, T., Safdari, Y., 2014. Hydrogen peroxide Acts as a Secondary Messenger for Production of Silymarin in Ag+ Elicited Silybum marianum Hairy Root Cultures. Journal of Medicinal Plants and By-products. 1, 35-40.
Kleczkowski, K., Schell, J., Bandur, R., 1995. Phytohormone conjugates, Nature and function. CRIT REV PLANT SCI. 14(4), 283-298.
Küpper, H., Lombi, E., Zhao, F.J., McGrath, S.P., 2000. Cellular compartmentation of cadmium and zinc in relation to other elements in the hyperaccumulator Arabidopsis halleri. PLANTA. 212, 75-84.
Li, R.Q., Yu, C., Li, Y.R., Lam, T.W., Yiu, S.M., Kristiansen, K., Wang, J., 2009. SOAP2, an improved ultrafast tool for short read alignment. BIOINFORMATICS. 25(15), 1966-1967.
Liu, J.P., Zhang, C.C., Wei, C.C., Liu, X., Wang, M.G., Yu, F.F., Xie, Q., Tu, J.M., 2016. The RING Finger Ubiquitin E3 Ligase OsHTAS Enhances Heat Tolerance by Promoting H2O2-Induced Stomatal Closure in Rice. Plant physiology. 170, 429-443.
Liu, T.M., Zhu, S.Y., Tang, Q.M., Tang, S.W., 2015. Genome-wide transcriptomic profiling of ramie (Boehmeria nivea L. Gaud) in response to cadmium stress. Gene. 558(1), 131-137.
Livak, K.J., Schmittgen, T.D., 2001. Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCT method. Methods. 25(4), 402-408.
Luo, J.S., Yang, Y., Gu, T.Y., Wu, Z.M., Zhang, Z.H., 2019. The Arabidopsis defensin gene AtPDF2.5 mediates cadmium tolerance and accumulation. PLANT CELL ENVIRON. 1-15.
Martin, F., Bovet, L., Cordier, A., Stanke, M., Gunduz, I., Peitsch, M.C., Ivanov, N.V., 2012. Design of a tobacco exon array with application to investigate the differential cadmium accumulation property in two tobacco varieties. BMC GENOMICS. 13(1), 674-690.
Mazel, A., Levine, L., 2002. Induction of glucosyltransferase transcription and activity during superoxide-dependent cell death in Arabidopsis plants. PLANT PHYSIOL BIOCH. 40, 133-140.
Mittler R. 2002. Oxidative stress, antioxidants and stress tolerance. Trends Plant Sci. 7: 405-410.
Moller IM. 2001. Plant Mitochondria and oxidative stredd: Electron transport, NADPH turnover, and metabolism of reactive oxygen species. Annu Rev Plant Physiol Plant Mol Biol. 52: 561-591.
Milner, M.J., Mitani-Ueno, N., Yamaji, N., Yokosho, K., Craft, E., Fei, Z.J., Ebbs, S., Clemencia Zambrano, M., Ma, J.F., Kochian, L.V., 2014. Root and shoot transcriptome analysis of two ecotypes of Noccaea caerulescens uncovers the role of NcNramp1 in Cd hyperaccumlation. PLANT J. 78(3), 398-410.
Oono, Y., Yazawa, T., Kawahara, Y., Kanamori, H., Kobayashi, F., Sasaki, H., Mori, S., Wu, J.Z., Handa, H., Itoh, T., Matsumoto, T., 2014. Genome-wide transcriptome analysis reveals that cadmium stress signaling controls the expression of genes in drought stress signal pathways in rice. PLOS ONE. 9(5), 1-14.
Priest, D.M., Ambrose, S.J., Vaistij, F.E., Elias, L., Higgins, G.S., Ross, A.R.S., Abrams, S.R., Bowles, D.J., 2006. Use of the glucosyltransferase UGT71B6 to disturb abscisic acid homeostasis in Arabidopsis thaliana. PLANT J. 46(3), 492-502.
Qin, L., Wang, L., Guo, Y., Li, Y., Ümüt, H., Wang, Y., 2017. An ERF transcription factor from Tamarix hispida, ThCRF1, can adjust osmotic potential and reactive oxygen species scavenging capability to improve salt tolerance. Plant Sci. 265, 154-166.
Rajkumar, A.P., Qvist, P., Lazarus, R., Lescai, F., Ju, J., Nyegaard, M., Mors, O., Børglum, A.D., Li, Q.B., Christensen, J.H., 2015. Experimental validation of methods for differential gene expression analysis and sample pooling in RNA-seq. BMC GENOMICS. 16(1), 548-556.
Rodriguez-Serrano, M., Romero-Puertas M.C., Pazmino, D.M., Testillano, P.S., Risueno, M.C., del Rio, L.A., Sandalio, L.M., 2009. Cellular response of pea plants to cadmium toxicity, cross talk between reactive oxygen species, nitric oxide, and calcium. Plant PHYSIOL. 150, 229-243.
Salt, D.E., Wagner, G.J., 1993. Cadmium transport across tonoplast of vesicles from oat roots. Evidence for a Cd2+/H+ antiport activity. The journal of Biological Chemistry. 268(17), 12297-12302.
Saxena, I., Srikanth, S., Chen, Z., 2016. Cross Talk between H2O2 and Interacting Signal Molecules under Plant Stress Response. Frontiers in Plant Science. 7, 1-16.
Sepulveda-Jimenez, G., Rueda-Benıtez, P., Porta, H., Rocha-Sosa, M., 2004. A red beet (Beta vulgaris) UDP-glucosyltransferase gene induced by wounding, bacterial infiltration and oxidative stress. J EXP BOT. 1-7.
Sharma, S.S., Kumar, V., 2002. Responses of wild type and abscisic acid mutants of Arabidopsis thaliana to cadmium. J PLANT PHYSIOL. 159, 1323-1327.
Suwazono, Y., Kido, T., Nakagawa, H., Nishijo, M., Nogawa, K., 2009. Biological half-life of cadmium in the urine of inhabitants after cessation of cadmium exposure. Biomarkers. 14(2), 77-81.
Tognetti, V.B., Van Aken, O., Morreel, K., Vandenbroucke, K., Van de Cotte, B., De Clercq, I., Chiwocha, S., Fenske, R., Prinsen, E., Boerjan, W., Genty, B., Stubbs, K.A., Inze, D., Breusegema, F.V., 2010. Perturbation of indole-3-butyric acid homeostasis by the UDP- glucosyltransferase UGT74E2 modulates Arabidopsis architecture and water stress tolerance. PLANT CELL. 22, 2660-2679.
Uraguchi, S., Mori, S., Kuramata, M., Kawasaki, A., Arao, T., Ishikawa, S., 2009. Root-to-shoot Cd translocation via the xylem is the major process determining shoot and grain cadmium accumulation in rice. J EXP BOT. 60(9), 2677-2688.
Vandesompele, J., De Preter, K., Pattyn, F., Poppe, B., Roy, N.V., Paepe, A.D., Speleman, F., 2002. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol Res. 3(7), 1-12.
Vogel-Mikus, K., Pongrac, P., Kump, P., Necemer, M., Regvar, M., 2005. Colonisation of a Z9(2), 362n, Cd and Pb hyperaccumulator Thlaspi praecox Wulfen with indigenous arbuscular mycorrhizal fungal mixture induces changes in heavy metal and nutrient uptake. ENVIRON POLLUT. 13-371.
Wan, L.C., Zhang, H.Y., 2012. Cadmium toxicity, effects on cytoskeleton, vesicular trafficking and cell wall construction. Plant Signaling & Behavior. 7, 345-348.
Wang, C., Gao, C., Wang, L., Zheng, L., Yang, C., Wang, Y., 2013. Comprehensive transcriptional profiling of NaHCO3-stressed Tamarix hispida roots reveals networks of responsive genes. Plant Mol Biol. 84, 145-157.
Wang, PL., Lei, XJ., Lü, JX., Gao, CQ., 2020. Overexpression of the ThTPS gene enhanced salt and osmotic stress tolerance in Tamarix hispida. J For Res.
Wei, S.H., Zhou, Q.X., Wang, X., 2005. Cadmium Hyperaccumulator Solanum nigrum L. and its accumulating characteristics. Environmental science. 26(3), 167-171.
Wu, F.B., Zhang, G.P., Dominy, P., Wu, H.X., Bachir, Dango.M.L., 2007. Differences in yield components and kernel Cd accumulation in response to Cd toxicity in four barley genotypes. CHEMOSPHERE. 70, 83-92.
Xu, S.S., Lin, S.Z., Lai, Z.X., 2015. Cadmium impairs iron homeostasis in Arabidopsis thaliana by increasing the polysaccharide contents and the iron-binding capacity of root cell walls. PLANT SOIL. 392, 71-85.
Xu, Z.J., Nakajima, M., Suzuki, Y., Yamaguchi, I., 2002. Cloning and characterization of the Abscisic acid-specific glucosyltransferase gene from Adzuki bean seedings. J PLANT PHYSIOL. 129, 1285-1295.
Yang, G.Y., Wang, C., Wang, Y.C., Guo, Y.C., Zhao, Y.L., Yang, C.P., Gao, C.Q., 2016. Overexpression of ThVHAc1 and its potential upstream regulator, ThWRKY7, improved plant tolerance of Cadmium stress. SCI REP-UK. 1-17.
Yang, J.L., Wang, Y.C., Liu, G.F., Yang, C.P., Li, C.H., 2011. Tamarix hispida metallothionein-like ThMT3, a reactive oxygen species scavenger, increases tolerance against Cd2+, Zn2+, Cu2+, and NaCl in transgenic yeast. MOL BIOL REP. 38, 1567-1574.
Yang, X.E., Long, X.X., Ye, H.B., He, Z.L., Calver, D.V., Stofflla, P.J., 2004. Cadmium tolerance and hyperaccumulation in a new Zn-hyperaccumulating plant species (Sedum alfredii Hance). PLANT SOIL. 259, 181-189.
Ye, J., Fang, L., Zheng, H.K., Zhang, Y., Chen, J., Zhang, Z.J., Wang, J., Li, S.T., Li, R.Q., Bolund, L., Wang, J., 2006. WEGO, a web tool for plotting GO annotations. NUCLEIC ACIDS RES. 34, 293-297.
Yue, R.Q., Lu, C.X., Qi, J.S., Han, X.H., Yan, S.F., Guo, S.L., Liu, L., Fu, X.L., Chen, N.N., Yin, H.Y., Chi, H.F., Tie, S.G., 2016. Transcriptome analysis of cadmium-treated roots in maize (Zea mays L.). FRONT PLANT SCI. 7, 1298-1309.
Zang, D., Wang, C., Ji, X., Wang, Y., 2015. Tamarix hispida zinc finger protein ThZFP1 participates in salt and osmotic stress tolerance by increasing proline content and SOD and POD activities. Plant Sci. 235, 111-121.
Zhang, P., Wang, R.L., Ju, Q., Li, W.Q., Tran, L.P., Jin, X., 2019a. The R2R3-MYB transcription factor MYB49 regulates cadmium accumulation. Plant PHYSIOL.
Zhang, X., Wang, L., Meng, H., Wen, H., Fan, Y., Zhao, J., 2011. Maize ABP9 enhances tolerance to multiple stresses in transgenic Arabidopsis by modulating ABA signaling and cellular levels of reactive oxygen species. PLANT MOL BIOL. 75, 365-378.
Zhang, Z.H., Zhou, T., Tang, T.J., Song, H.Q., Guan, C.Y., Huang, J.S., Hua, Y.P., 2019b. Multiomics landscapes uncover the pivotal role of subcellular reallocation of cadmium in regulating rapeseed resistance to cadmium toxicity. J EXP BOT. 1-19.
Zhou, B.R., Yao, W.J., Wang, S.J., Wang, X.W., Jiang, T.B., 2014. The Metallothionein Gene, TaMT3, from Tamarix androssowii Confers Cd2+ Tolerance in Tobacco. Int. J. Mol. Sci. 15, 10398-10409.
Zhou, Q., Guo, J.J., He, C.S., Shen, C., Huang, Y.Y., Chen, J.X., Guo, J.H., Yuan, J.G., Yang, Z.Y., 2016. Comparative Transcriptome Analysis between Low- and High- Cadmium -Accumulating Genotypes of Pakchoi (Brassica chinensis L.) in Response to Cadmium Stress. ENVIRON SCI TECHNOL. 50, 6485-6494.
Zuccarelli, R., Coelho, A.C.P., Peres, L.E.P., Freschi, L., 2017. Shedding light on NO homeostasis, light as a key regulator of glutathione and nitric oxide metabolisms during seedling deetiolation. NITRIC OXIDE-BIOL CH. 68, 77-90.