The eastern margin of the Japan Sea is located along an active convergent boundary between the North American and Eurasian tectonic plates. Okushiri Island, which is situated off the southwest coast of Hokkaido, is located in an active tectonic zone where many active submarine faults are distributed. Studying the records of past tsunamis on Okushiri Island is important for reconstructing the history and frequency of fault activity in this region, as well as the history of tsunamis in the northern part of the eastern margin of the Japan Sea. Five tsunami deposit horizons have been identified previously on Okushiri Island, including that of the 1741 tsunami, which are interbedded in the coastal lowlands and Holocene terraces. However, these known tsunami deposits date back only ~3,000 years. A much longer record of tsunami occurrence is required to consider the frequency of submarine fault activity. In this study, we cored from 7 to 25 m depth in the Wasabiyachi lowland on the southern part of Okushiri Island, where previous studies have confirmed the presence of multiple tsunami deposits on peat layer surfaces. The results indicate that the Wasabiyachi lowland comprises an area that was obstructed by coastal barriers between the lowland and the coast at ~8.5 ka and consists of muddy sediment and peat layers formed in lagoons and floodplains, respectively. In addition, event deposits and 15 tsunami horizons were observed among the turbidites and peat layers, dating back as far as 3,000 years. Combined with previous findings, Okushiri Island has sustained 20 tsunami events between ~7.5 ka and the present. These findings are critical for investigating the activities of submarine faults off the southwestern coast of Hokkaido, as well as for determining tsunami risks along the coast of the Japan Sea between North Tohoku and Hokkaido.