Human tissue samples
The paraffin tissue sections of nine OSCC patients came from the Department of Pathology, Shandong Provincial Stomatological Hospital. All patients in this study were diagnosed by pathology, and no other treatments, such as radiotherapy or chemotherapy, were performed before surgery. The study has been approved by the Bioethics Committee of Shandong Stomatological Hospital (Approval No. 20201105) and all patients provided informed consent.
Hematoxylin and eosin (HE) staining and Immunohistochemical (IHC) staining
After dewaxing and hydration, the sections were soaked in hematoxylin dye for 15 minutes. Subsequently, the sections were stained with eosin dye for 7 minutes. Then the sections were dehydrated with an ascending alcohol concentration gradient, soaked in xylene solution twice, and then mounted with neutral gum. In order to IHC staining, the sections were incubated with 0.3% hydrogen peroxide for 30 minutes at room temperature, the dewaxed paraffin sections were pre-treated with 1% bovine serum albumin in phosphate-buffered saline (BSA-PBS) for 20 minutes at room temperature. Next, the sections were treated with primary antibody (anti-PCNA, abcam92552, 1:100; anti-Notum,abcam106448, 1:100; anti-Shh, ab53281, 1:100; anti-β-catenin, ab32572, 1:100) in BSA-PBS at room temperature. Two hours later, the sections were rinsed by PBS and treated with secondary antibody (goat anti-rabbit IgG H&L, abcam6721, 1:200) for 1 hour at room temperature. Diaminobenzidine (Sigma-Aldrich, MO, USA) was used as the substrate for immune complexes for visualization. Images were acquired and taken by an optical microscope (Olympus BX-53, Tokyo, Japan).
Bioinformatics analysis
The row count expression matrix of TCGA-HNSC cohort was obtained from GDC data portal (https://portal.gdc.cancer.gov/). The FPKM (log2 [FPKM+1]) expression matrix of TCGA-HNSC cohort was downloaded from UCSC Xena database (https://xenabrowser.net/). The patients whose anatomic neoplasm subdivisions are from oral cavity (including oral tongue, buccal mucosa, alveolar ridge, tonsil, base of tongue, floor of mouth, lip, hard palate, and oral cavity) were selected for our studies, which contain 305 OSCC samples, and 30 control samples. The R package “edgR” was used for differentially expressed gene (DEG) analysis and the cut-off values for DEGs were set as: FDR<0.05 and |log2FC|>1. According to the median expression of Notum, OSCC samples were divided into high Notum expression group and low Notum expression group and the gene enrichment analysis (GSEA) was performed by R package “ClusterProfiler” [17] to explore the biological function of Notum (HALLMARK gene-set). Protein-protein interaction (PPI) analysis of Notum was performed by STRING database (https://www.string-db.org/).
Cell culture
Human OSCC lines, Cal-27 and SCC-15, were obtained from Shanghai Cell Bank of Chinese Academy of Sciences (Shanghai, China). The cells were cultured in Dulbecco’s modified Eagle’s medium (DMEM) containing 10% fetal bovine serum (Gibco, Grand Island, NY, USA), and 1% penicillin streptomycin at 37℃ in humidified atmosphere of 5% CO2 and 95% air.
Transfection of Notum and Neutralize extracellular Notum
For overexpression, the pcDNA3.1-Notum and the empty pcDNA3.1 (negative controls) were purchase form Youbao Biology (G115588). The plasmid was transfected into Cal-27 or SCC-15 cells using Lipofectamine 2000 (ZC302, Zomanbio, China) according to manufacturer's protocol. For knockdown of Notum, three Notum-siRNAs and one siRNA for negative control (Ribobio, Guangzhou, China) were transfected by riboFECTTMCP (C10511-05, Ribobio, Guangzhou, China) according to manufacturer's protocol. In order to neutralize the extracellular Notum, 10 µg/ml of palmitoleoyl-protein carboxylesterase (Notum) antibody (ab106448; Abcam, UK) and IgG antibody (ab171870, Abcam, UK) to Vector group and Notum overexpression groups respectively. Cells were incubated for a 24, 48, 72 hours.
Western blotting
All proteins are separated by RIPA lysis buffer (CW2333S, Kangwei,China), containing 1% phosphatase inhibitor and 1% protease inhibitor. The protein concentration was determined with BCA kit (P0010, Beyotime). 30µg of total protein was separated by 10% SDS-PAGE gel and transferred onto a 0.45 µm PVDF membrane. The membranes were immersed in a Tris-buffered saline Tween 20 solution with 5% BSA for 1 hour, and then incubated with primary antibodies at 4°C overnight including anti-Notum (ab106448, Abcam, UK), anti-GAPDH (10494-1-AP, Proteintech, USA), ant-Shh (ab53281, Abcam, UK), anti-β-catenin (ab32572, Abcam, UK), anti-GSK3β (12456T, Cell Signaling Technology, USA), anti-p-GSK3β (Ser9) (ab68476, Abcam, UK). The subsequent day, the sections were incubated with secondary antibody goat anti-rabbit (ab6721, Abcam, UK) at room temperature for 1 hour. Finally, the ECL detection system (Smart Chemi 420, Beijing, China) was used for immune reaction zone visualization. The membrane intensity was measured with Image J software.
Real-time quantitative polymerase chain reaction analysis
Total RNA was extracted with TRIzol reagent, and the cDNA was synthesized according to the reverse transcriptase product manual (Takara Bio, Shiga, Japan). The gene-specific primers targeted to Notum, PCNA, MMP2, MMP9, Bax, Bcl-2, GAPDH were synthesized commercially (AG Shanghai, China). The gene-specific primer sequences are listed in Table1. qRT-PCR was performed with the Roche Light Cycler@ 96 SW using SYBR Premix Ex Taq (DRR820A, TaKaRa, China).
Table 1
Specific primers for control and target genes
Gene
|
Forward primer
|
Reverse Primer
|
Notum
|
CTACTGGTGGAACGCAAACATGG
|
CGCACCACCTCCTGGATGATG
|
PCNA
|
CGCCCTGGTTCTGGAGGTAA
|
GGCTGAGACTTGCGTAAGGG
|
MMP2
|
CTCATCGCAGATGCCTGGAA
|
TTCAGGTAATAGGCACCCCCCTTGAAGA
|
MMP9
|
CGCAGACATCGTCATCCAGT
|
GGACCACAACTCGTCATCGT
|
Shh
Ptch1
Gli1
|
TCCAGAAACTCCGAGCGATTTA
ACCAGAATGGGTCCACGACAA
ACACATATGGACCTGGCTTTGGA
|
GTCACCCGCAGTTTCACTCC
AAAGTCTGAGGTGTCCCGCAAG
CTGCCCTATGTGAAGCCCTATTTG
|
GAPDH
|
GTCTCCTCTGACTTCAACAGCG
|
ACCACCCTGTTGCTGTAGCCAA
|
Enzyme linked immunosorbent assay
The cell supernatant was collected and the level of exogenous Notum was measured using ELISA kits (CSB-EL015955H,Cusibio, Wuhan, China) following to the manufacturer’s protocols.
Clone Formation Assay
Cells were seeded in 6-well plates at a density of 400 cells/well and cultured for 10 days. After fixation with 4 % paraformaldehyde for 15 minutes, sections were dyed with 0.1% crystal violet for 15 minutes. Only colonies that contained more than 50 cells were counted.
Cell Counting Kit-8 (CCK8)
Cell proliferation was assessed using CCK8 (MedChemExpress, China) according to the manufacturer's instruction. In brief, 10 µl of CCK8 solution was added to each well and the plates were incubated for an hour at 37°C. Optical density was acquired at 450 nm from a Bio-Rad microplate reader (Model 680, Bio-Rad, USA).
Wound-healing assay
Cells were transfected and after 48 hours incubation, replated to 6-well plates at a density of 4×105 cells/well for 12 hours. A wound was generated using a pipette tip in each well. After 24 or 48 hours of culture, the wound closure was measured using Image J software.
Transwell
After 48 hours transfection, cells (3×104 cells/well, in 100 µl serum-free medium) were added to the upper chamber of a 24-well plate in which the lower chamber contained 600 µl of culture medium with 10% FBS. After a period of 24 hours, we used cotton swabs to wipe out the cells that had not migrated through the membrane to the lower chamber. We fixed the migrated or invaded cells in 4% paraformaldehyde for 30 minutes, and then stained them with 0.1% crystal violet for another 20 minutes. The cells were photographed with a light microscope (Olympus BX53, 100 Tokyo, Japan) at magnification and counted for analysis.
Hoechst 33342/PI assay
After 48 hours transfection, cells (5×103 cells/well) were added to a 24-well plate for 12 hours. Then the cells were co-stained with Hoechst 33342 (10 µg/mL; Beyotime, Shanghai, China) and PI (5 µg/mL; Beyotime) for 15 minutes. After rinsing with PBS three times, cell fluorescence was observed and captured under a fluorescence microscope.
Apoptosis Flow-Cytometry Assay
The Cal-27 and SCC-15 cells were placed in 6-well plates at 2×105 cells per well. After transfection with siRNA for 48 hours, cell apoptosis was measured using FITC-AnnexinV Apoptosis Detection Kit (556547, BD Biosciences, China) following to the manufacturer’s protocols.
Cell immunofluorescence
Cells were fixed with 4% paraformaldehyde for 30 minutes and permeabilized with 0.1% Triton for 5 minutes. Blocking was performed with PBS containing 3% bovine serum albumin for 30 minutes. Cells were incubated with anti-Notum antibody overnight at 4°C in the dark. Then, the cells were rinsed and incubated with secondary antibodies anti rabbit FITC (SA00003-2, Proteintech, China). Afterwards, cells were stained with DAPI (ab104139, Abcam, UK) and observed under a fluorescence confocal microscope.
In vivo tumorigenicity assay
Eight SPF-grade BALB/c nu/nu male nude mice (6 weeks old) without a specific pathogen were used and this study was approved by the Bioethics Committee of Shandong Stomatological Hospital (Approval No. 20210711). After a week of adaptive feeding, the nude mice were randomly divided into negative control (NC) group and si-Notum group with four mice in each group. Then, 0.2 mL of NC and si-Notum SCC15 cell suspensions at a concentration of 5×106 cells/mL were subcutaneously injected into the right back of each mouse. Tumor volumes (volume = length × width2 /2) was measured every 3 days after injection. After 30 days, tumor formation was obvious and the mice were sacrificed. The tumors were removed and examined.
Statistical analysis
All data was analyzed at least three times and expressed as means ± standard deviations. Statistical analysis was performed using GraphPad Prism7 software (CA, USA). Differences between experimental and control groups were calculated using the Student t test. p value <0.05 indicated a statistically significant difference.